Gene info for SO0421 in Shewanella oneidensis MR-1

Name: ampD
Annotation: AmpD protein (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, + strand, nucleotides 435,462 to 436,007
See nucleotide sequence around SO0421 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EJP2

Nearby Genes

500 ntSO0417 and SO0418 are separated by 106 nucleotidesSO0418 and SO_0419 are separated by 275 nucleotidesSO_0419 and SO0420.2 are separated by 44 nucleotidesSO0420.2 and SO0420 are separated by 254 nucleotidesSO0420 and ampD overlap by 54 nucleotidesampD and ampE are separated by 269 nucleotidesampE and pdhR are separated by 437 nucleotidespdhR and aceE are separated by 81 nucleotidesaceE and aceF are separated by 12 nucleotidesaceF and lpdA are separated by 149 nucleotides SO0417: SO0417 - pilin, putative (NCBI ptt file), at 433,391 to 433,807 SO0417 SO0418: SO0418 - hypothetical protein (NCBI ptt file), at 433,914 to 434,012 SO0418 SO_0419: SO_0419 - no description, at 434,288 to 434,911 _0419 SO0420.2: SO0420.2 - hypothetical nicotinate-nucleotide pyrophosphorylase (NCBI ptt file), at 434,956 to 435,168 SO0420.2 SO0420: SO0420 - hypothetical protein (NCBI ptt file), at 435,423 to 435,515 SO0420 SO0421: ampD - AmpD protein (NCBI ptt file), at 435,462 to 436,007 ampD SO0422: ampE - AmpE protein (NCBI ptt file), at 436,277 to 437,128 ampE SO0423: pdhR - pyruvate dehydrogenase complex repressor (NCBI ptt file), at 437,566 to 438,318 pdhR SO0424: aceE - pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase (NCBI ptt file), at 438,400 to 441,066 aceE SO0425: aceF - pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase (NCBI ptt file), at 441,079 to 443,112 aceF SO0426: lpdA - pyruvate dehydrogenase complex, E3 component, lipoamide dehydrogenase (NCBI ptt file), at 443,262 to 444,689 lpdA
Locus Name Description Strand Phenotype
SO0417 SO0417 pilin, putative (NCBI ptt file) - sig.
SO0418 SO0418 hypothetical protein (NCBI ptt file) - no data
SO_0419 SO_0419 no description - strong
SO0420.2 SO0420.2 hypothetical nicotinate-nucleotide pyrophosphorylase (NCBI ptt file) - no data
SO0420 SO0420 hypothetical protein (NCBI ptt file) - no data
SO0421 ampD AmpD protein (NCBI ptt file) + strong
SO0422 ampE AmpE protein (NCBI ptt file) + sig.
SO0423 pdhR pyruvate dehydrogenase complex repressor (NCBI ptt file) + strong
SO0424 aceE pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase (NCBI ptt file) + strong
SO0425 aceF pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase (NCBI ptt file) + strong
SO0426 lpdA pyruvate dehydrogenase complex, E3 component, lipoamide dehydrogenase (NCBI ptt file) + no data

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