Gene info for SO0408 in Shewanella oneidensis MR-1

Name: gppA
Annotation: guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, + strand, nucleotides 425,050 to 425,970
See nucleotide sequence around SO0408 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EJQ4

Nearby Genes

500 ntSO0403 and SO0404 are separated by 22 nucleotidesSO0404 and rho are separated by 112 nucleotidesrho and trxA are separated by 212 nucleotidestrxA and SO0407 are separated by 151 nucleotidesSO0407 and gppA are separated by 0 nucleotidesgppA and SO0409 are separated by 99 nucleotidesSO0409 and mutT are separated by 138 nucleotidesmutT and SO0411 are separated by 87 nucleotidesSO0411 and SO0412 are separated by 60 nucleotidesSO0412 and SO0413 overlap by 8 nucleotides SO0403: SO0403 - hypothetical protein (NCBI ptt file), at 417,311 to 418,180 SO0403 SO0404: SO0404 - hypothetical protein (NCBI ptt file), at 418,203 to 421,661 SO0404 SO0405: rho - transcription termination factor Rho (NCBI ptt file), at 421,774 to 423,039 rho SO0406: trxA - thioredoxin 1 (NCBI ptt file), at 423,252 to 423,578 trxA SO0407: SO0407 - ATP-dependent RNA helicase, DEAD box family (NCBI ptt file), at 423,730 to 425,049 SO0407 SO0408: gppA - guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase (NCBI ptt file), at 425,050 to 425,970 gppA SO0409: SO0409 - hypothetical protein (NCBI ptt file), at 426,070 to 426,606 SO0409 SO0410: mutT - mutator mutT protein (NCBI ptt file), at 426,745 to 427,137 mutT SO0411: SO0411 - conserved hypothetical protein (NCBI ptt file), at 427,225 to 427,434 SO0411 SO0412: SO0412 - conserved hypothetical protein (NCBI ptt file), at 427,495 to 428,229 SO0412 SO0413: SO0413 - kinase, putative (NCBI ptt file), at 428,222 to 428,839 SO0413
Locus Name Description Strand Phenotype
SO0403 SO0403 hypothetical protein (NCBI ptt file) + strong
SO0404 SO0404 hypothetical protein (NCBI ptt file) + strong
SO0405 rho transcription termination factor Rho (NCBI ptt file) - no data
SO0406 trxA thioredoxin 1 (NCBI ptt file) - no data
SO0407 SO0407 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) + strong
SO0408 gppA guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase (NCBI ptt file) + strong
SO0409 SO0409 hypothetical protein (NCBI ptt file) - sig.
SO0410 mutT mutator mutT protein (NCBI ptt file) - insig.
SO0411 SO0411 conserved hypothetical protein (NCBI ptt file) - insig.
SO0412 SO0412 conserved hypothetical protein (NCBI ptt file) - insig.
SO0413 SO0413 kinase, putative (NCBI ptt file) - no data

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