Gene info for SO0260 in Shewanella oneidensis MR-1

Name: ccmD
Annotation: heme exporter protein CcmD (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, - strand, nucleotides 261,023 to 261,223
See nucleotide sequence around SO0260 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EK43

Nearby Genes

500 ntrpoA and rplQ are separated by 40 nucleotidesrplQ and SO0258 are separated by 348 nucleotidesSO0258 and SO0258.1 are separated by 254 nucleotidesSO0258.1 and ccmE are separated by 387 nucleotidesccmE and ccmD overlap by 4 nucleotidesccmD and ccmC overlap by 1 nucleotidesccmC and ccmB are separated by 1 nucleotidesccmB and ccmA are separated by 11 nucleotidesccmA and scyA are separated by 325 nucleotidesscyA and SO0265 are separated by 80 nucleotides SO0256: rpoA - DNA-directed RNA polymerase, alpha subunit (NCBI ptt file), at 257,763 to 258,752 rpoA SO0257: rplQ - ribosomal protein L17 (NCBI ptt file), at 258,793 to 259,188 rplQ SO0258: SO0258 - hypothetical protein (NCBI ptt file), at 259,537 to 259,692 SO0258 SO0258.1: SO0258.1 - putative transposase (NCBI ptt file), at 259,947 to 260,153 SO0258.1 SO0259: ccmE - cytochrome c biogenesis protein CcmE (NCBI ptt file), at 260,541 to 261,026 ccmE SO0260: ccmD - heme exporter protein CcmD (NCBI ptt file), at 261,023 to 261,223 ccmD SO0261: ccmC - heme exporter protein CcmC (NCBI ptt file), at 261,223 to 261,969 ccmC SO0262: ccmB - heme exporter protein CcmB (NCBI ptt file), at 261,971 to 262,657 ccmB SO0263: ccmA - heme exporter protein CcmA (NCBI ptt file), at 262,669 to 263,319 ccmA SO0264: scyA - cytochrome c (NCBI ptt file), at 263,645 to 263,944 scyA SO0265: SO0265 - conserved hypothetical protein (NCBI ptt file), at 264,025 to 265,272 SO0265
Locus Name Description Strand Phenotype
SO0256 rpoA DNA-directed RNA polymerase, alpha subunit (NCBI ptt file) + no data
SO0257 rplQ ribosomal protein L17 (NCBI ptt file) + no data
SO0258 SO0258 hypothetical protein (NCBI ptt file) + no data
SO0258.1 SO0258.1 putative transposase (NCBI ptt file) + insig.
SO0259 ccmE cytochrome c biogenesis protein CcmE (NCBI ptt file) - strong
SO0260 ccmD heme exporter protein CcmD (NCBI ptt file) - no data
SO0261 ccmC heme exporter protein CcmC (NCBI ptt file) - strong
SO0262 ccmB heme exporter protein CcmB (NCBI ptt file) - strong
SO0263 ccmA heme exporter protein CcmA (NCBI ptt file) - strong
SO0264 scyA cytochrome c (NCBI ptt file) + strong
SO0265 SO0265 conserved hypothetical protein (NCBI ptt file) - sig.

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