Gene info for SO0221 in Shewanella oneidensis MR-1

Name: rplA
Annotation: ribosomal protein L1 (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, + strand, nucleotides 230,234 to 230,935
See nucleotide sequence around SO0221 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EK77

Nearby Genes

500 nttRNA-Thr-1 and tufB are separated by 115 nucleotidestufB and secE are separated by 276 nucleotidessecE and nusG are separated by 9 nucleotidesnusG and rplK are separated by 127 nucleotidesrplK and rplA are separated by 4 nucleotidesrplA and rplJ are separated by 265 nucleotidesrplJ and rplL are separated by 54 nucleotidesrplL and rpoB are separated by 242 nucleotidesrpoB and rpoC are separated by 83 nucleotidesrpoC and rpsL are separated by 179 nucleotides SO_t008: tRNA-Thr-1 - tRNA-Thr (RefSeq), at 227,089 to 227,164 tRNA-Thr-1 SO0217: tufB - translation elongation factor Tu (NCBI ptt file), at 227,280 to 228,464 tufB SO0218: secE - preprotein translocase, SecE subunit (NCBI ptt file), at 228,741 to 229,112 secE SO0219: nusG - transcription antitermination protein NusG (NCBI ptt file), at 229,122 to 229,673 nusG SO0220: rplK - ribosomal protein L11 (NCBI ptt file), at 229,801 to 230,229 rplK SO0221: rplA - ribosomal protein L1 (NCBI ptt file), at 230,234 to 230,935 rplA SO0222: rplJ - ribosomal protein L10 (NCBI ptt file), at 231,201 to 231,701 rplJ SO0223: rplL - ribosomal protein L7/L12 (NCBI ptt file), at 231,756 to 232,124 rplL SO0224: rpoB - DNA-directed RNA polymerase, beta subunit (NCBI ptt file), at 232,367 to 236,404 rpoB SO0225: rpoC - DNA-directed RNA polymerase, beta' subunit (NCBI ptt file), at 236,488 to 240,705 rpoC SO0226: rpsL - ribosomal protein S12 (NCBI ptt file), at 240,885 to 241,259 rpsL
Locus Name Description Strand Phenotype
SO_t008 tRNA-Thr-1 tRNA-Thr (RefSeq) + strong
SO0217 tufB translation elongation factor Tu (NCBI ptt file) + strong
SO0218 secE preprotein translocase, SecE subunit (NCBI ptt file) + no data
SO0219 nusG transcription antitermination protein NusG (NCBI ptt file) + no data
SO0220 rplK ribosomal protein L11 (NCBI ptt file) + no data
SO0221 rplA ribosomal protein L1 (NCBI ptt file) + no data
SO0222 rplJ ribosomal protein L10 (NCBI ptt file) + no data
SO0223 rplL ribosomal protein L7/L12 (NCBI ptt file) + no data
SO0224 rpoB DNA-directed RNA polymerase, beta subunit (NCBI ptt file) + no data
SO0225 rpoC DNA-directed RNA polymerase, beta' subunit (NCBI ptt file) + no data
SO0226 rpsL ribosomal protein S12 (NCBI ptt file) + no data

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