Gene info for SO0103 in Shewanella oneidensis MR-1

Name: fdnI
Annotation: formate dehydrogenase, nitrate-inducible, cytochrome b556 subunit (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, + strand, nucleotides 112,631 to 113,272
See nucleotide sequence around SO0103 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EKI9

Nearby Genes

500 nthutC and hutU are separated by 126 nucleotideshutU and hutH are separated by 64 nucleotideshutH and fdnG are separated by 625 nucleotidesfdnG and fdnH are separated by 2 nucleotidesfdnH and fdnI overlap by 4 nucleotidesfdnI and fdhE overlap by 1 nucleotidesfdhE and selA are separated by 57 nucleotidesselA and selB overlap by 4 nucleotidesselB and tRNA-SeC(p)-1 overlap by 125 nucleotidestRNA-SeC(p)-1 and fdhD are separated by 141 nucleotides SO0096: hutC - histidine utilization repressor (NCBI ptt file), at 103,967 to 104,674 hutC SO0097: hutU - urocanate hydratase (NCBI ptt file), at 104,801 to 106,471 hutU SO0098: hutH - histidine ammonia-lyase (NCBI ptt file), at 106,536 to 108,077 hutH SO0101: fdnG - selenium-containing formate dehydrogenase, nitrate inducible, alpha subunit (NCBI ptt file), at 108,703 to 111,717 fdnG SO0102: fdnH - formate dehydrogenase, nitrate-inducible, iron-sulfur subunit (NCBI ptt file), at 111,720 to 112,634 fdnH SO0103: fdnI - formate dehydrogenase, nitrate-inducible, cytochrome b556 subunit (NCBI ptt file), at 112,631 to 113,272 fdnI SO0104: fdhE - fdhE protein (NCBI ptt file), at 113,272 to 114,180 fdhE SO0105: selA - L-seryl-tRNA selenium transferase (NCBI ptt file), at 114,238 to 115,659 selA SO0106: selB - selenocysteine-specific translation elongation factor (NCBI ptt file), at 115,656 to 117,677 selB SO_t002: tRNA-SeC(p)-1 - tRNA-Sec (RefSeq), at 117,553 to 117,643 tRNA-SeC(p)-1 SO0107: fdhD - formate dehydrogenase accessory protein FdhD (NCBI ptt file), at 117,785 to 118,621 fdhD
Locus Name Description Strand Phenotype
SO0096 hutC histidine utilization repressor (NCBI ptt file) + insig.
SO0097 hutU urocanate hydratase (NCBI ptt file) + cofit
SO0098 hutH histidine ammonia-lyase (NCBI ptt file) + cofit
SO0101 fdnG selenium-containing formate dehydrogenase, nitrate inducible, alpha subunit (NCBI ptt file) + insig.
SO0102 fdnH formate dehydrogenase, nitrate-inducible, iron-sulfur subunit (NCBI ptt file) + insig.
SO0103 fdnI formate dehydrogenase, nitrate-inducible, cytochrome b556 subunit (NCBI ptt file) + insig.
SO0104 fdhE fdhE protein (NCBI ptt file) + insig.
SO0105 selA L-seryl-tRNA selenium transferase (NCBI ptt file) + insig.
SO0106 selB selenocysteine-specific translation elongation factor (NCBI ptt file) + insig.
SO_t002 tRNA-SeC(p)-1 tRNA-Sec (RefSeq) - no data
SO0107 fdhD formate dehydrogenase accessory protein FdhD (NCBI ptt file) + insig.

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