Gene info for SO0040 in Shewanella oneidensis MR-1

Name: aroE
Annotation: shikimate 5-dehydrogenase (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, + strand, nucleotides 43,717 to 44,580
See nucleotide sequence around SO0040 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EKQ0

Nearby Genes

500 ntsmg and SO0036 are separated by 112 nucleotidesSO0036 and SO0037 are separated by 138 nucleotidesSO0037 and hemF are separated by 28 nucleotideshemF and SO0039 are separated by 29 nucleotidesSO0039 and aroE are separated by 189 nucleotidesaroE and SO0041 are separated by 25 nucleotidesSO0041 and SO0042 are separated by 91 nucleotidesSO0042 and SO0043 are separated by 313 nucleotidesSO0043 and Sp16SC are separated by 164 nucleotidesSp16SC and Sp23SC are separated by 316 nucleotides SO0035: smg - smg protein (NCBI ptt file), at 40,263 to 40,739 smg SO0036: SO0036 - topoisomerase DNA-binding C4 zinc finger domain protein (NCBI ptt file), at 40,852 to 41,418 SO0036 SO0037: SO0037 - Sua5/YciO/YrdC/YwlC family protein (NCBI ptt file), at 41,557 to 42,123 SO0037 SO0038: hemF - coproporphyrinogen III oxidase, aerobic (NCBI ptt file), at 42,152 to 43,060 hemF SO0039: SO0039 - hypothetical globin (NCBI ptt file), at 43,090 to 43,527 SO0039 SO0040: aroE - shikimate 5-dehydrogenase (NCBI ptt file), at 43,717 to 44,580 aroE SO0041: SO0041 - conserved hypothetical protein (NCBI ptt file), at 44,606 to 44,881 SO0041 SO0042: SO0042 - carbonic anhydrase, family 3 (NCBI ptt file), at 44,973 to 45,521 SO0042 SO0043: SO0043 - hypothetical protein (NCBI ptt file), at 45,835 to 45,951 SO0043 SO_r001: Sp16SC - 16S ribosomal RNA (RefSeq), at 46,116 to 47,644 Sp16SC SO_r002: Sp23SC - 23S ribosomal RNA (RefSeq), at 47,961 to 50,853 Sp23SC
Locus Name Description Strand Phenotype
SO0035 smg smg protein (NCBI ptt file) + strong
SO0036 SO0036 topoisomerase DNA-binding C4 zinc finger domain protein (NCBI ptt file) + sig.
SO0037 SO0037 Sua5/YciO/YrdC/YwlC family protein (NCBI ptt file) + no data
SO0038 hemF coproporphyrinogen III oxidase, aerobic (NCBI ptt file) + strong
SO0039 SO0039 hypothetical globin (NCBI ptt file) - sig.
SO0040 aroE shikimate 5-dehydrogenase (NCBI ptt file) + strong
SO0041 SO0041 conserved hypothetical protein (NCBI ptt file) + insig.
SO0042 SO0042 carbonic anhydrase, family 3 (NCBI ptt file) - sig.
SO0043 SO0043 hypothetical protein (NCBI ptt file) + no data
SO_r001 Sp16SC 16S ribosomal RNA (RefSeq) + no data
SO_r002 Sp23SC 23S ribosomal RNA (RefSeq) + no data

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