Gene info for SO0038 in Shewanella oneidensis MR-1

Name: hemF
Annotation: coproporphyrinogen III oxidase, aerobic (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, + strand, nucleotides 42,152 to 43,060
See nucleotide sequence around SO0038 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EKQ2

Nearby Genes

500 ntSO0033 and SO0034 are separated by 83 nucleotidesSO0034 and smg are separated by 2 nucleotidessmg and SO0036 are separated by 112 nucleotidesSO0036 and SO0037 are separated by 138 nucleotidesSO0037 and hemF are separated by 28 nucleotideshemF and SO0039 are separated by 29 nucleotidesSO0039 and aroE are separated by 189 nucleotidesaroE and SO0041 are separated by 25 nucleotidesSO0041 and SO0042 are separated by 91 nucleotidesSO0042 and SO0043 are separated by 313 nucleotides SO0033: SO0033 - LysM domain protein (NCBI ptt file), at 38,024 to 39,160 SO0033 SO0034: SO0034 - DNA processing protein DprA, putative (NCBI ptt file), at 39,244 to 40,260 SO0034 SO0035: smg - smg protein (NCBI ptt file), at 40,263 to 40,739 smg SO0036: SO0036 - topoisomerase DNA-binding C4 zinc finger domain protein (NCBI ptt file), at 40,852 to 41,418 SO0036 SO0037: SO0037 - Sua5/YciO/YrdC/YwlC family protein (NCBI ptt file), at 41,557 to 42,123 SO0037 SO0038: hemF - coproporphyrinogen III oxidase, aerobic (NCBI ptt file), at 42,152 to 43,060 hemF SO0039: SO0039 - hypothetical globin (NCBI ptt file), at 43,090 to 43,527 SO0039 SO0040: aroE - shikimate 5-dehydrogenase (NCBI ptt file), at 43,717 to 44,580 aroE SO0041: SO0041 - conserved hypothetical protein (NCBI ptt file), at 44,606 to 44,881 SO0041 SO0042: SO0042 - carbonic anhydrase, family 3 (NCBI ptt file), at 44,973 to 45,521 SO0042 SO0043: SO0043 - hypothetical protein (NCBI ptt file), at 45,835 to 45,951 SO0043
Locus Name Description Strand Phenotype
SO0033 SO0033 LysM domain protein (NCBI ptt file) + insig.
SO0034 SO0034 DNA processing protein DprA, putative (NCBI ptt file) + insig.
SO0035 smg smg protein (NCBI ptt file) + strong
SO0036 SO0036 topoisomerase DNA-binding C4 zinc finger domain protein (NCBI ptt file) + sig.
SO0037 SO0037 Sua5/YciO/YrdC/YwlC family protein (NCBI ptt file) + no data
SO0038 hemF coproporphyrinogen III oxidase, aerobic (NCBI ptt file) + strong
SO0039 SO0039 hypothetical globin (NCBI ptt file) - sig.
SO0040 aroE shikimate 5-dehydrogenase (NCBI ptt file) + strong
SO0041 SO0041 conserved hypothetical protein (NCBI ptt file) + insig.
SO0042 SO0042 carbonic anhydrase, family 3 (NCBI ptt file) - sig.
SO0043 SO0043 hypothetical protein (NCBI ptt file) + no data

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