Gene info for SO0033 in Shewanella oneidensis MR-1

Annotation: LysM domain protein (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, + strand, nucleotides 38,024 to 39,160
See nucleotide sequence around SO0033 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EKQ7

Nearby Genes

500 nttrkH-2 and trkA are separated by 11 nucleotidestrkA and sun are separated by 15 nucleotidessun and fmt are separated by 2 nucleotidesfmt and def-1 are separated by 15 nucleotidesdef-1 and SO0033 are separated by 125 nucleotidesSO0033 and SO0034 are separated by 83 nucleotidesSO0034 and smg are separated by 2 nucleotidessmg and SO0036 are separated by 112 nucleotidesSO0036 and SO0037 are separated by 138 nucleotidesSO0037 and hemF are separated by 28 nucleotides SO0028: trkH-2 - potassium uptake protein TrkH (NCBI ptt file), at 32,252 to 33,694 trkH-2 SO0029: trkA - potassium uptake protein TrkA (NCBI ptt file), at 33,706 to 35,115 trkA SO0030: sun - sun protein (NCBI ptt file), at 35,131 to 36,417 sun SO0031: fmt - methionyl-tRNA formyltransferase (NCBI ptt file), at 36,420 to 37,376 fmt SO0032: def-1 - polypeptide deformylase (NCBI ptt file), at 37,392 to 37,898 def-1 SO0033: SO0033 - LysM domain protein (NCBI ptt file), at 38,024 to 39,160 SO0033 SO0034: SO0034 - DNA processing protein DprA, putative (NCBI ptt file), at 39,244 to 40,260 SO0034 SO0035: smg - smg protein (NCBI ptt file), at 40,263 to 40,739 smg SO0036: SO0036 - topoisomerase DNA-binding C4 zinc finger domain protein (NCBI ptt file), at 40,852 to 41,418 SO0036 SO0037: SO0037 - Sua5/YciO/YrdC/YwlC family protein (NCBI ptt file), at 41,557 to 42,123 SO0037 SO0038: hemF - coproporphyrinogen III oxidase, aerobic (NCBI ptt file), at 42,152 to 43,060 hemF
Locus Name Description Strand Phenotype
SO0028 trkH-2 potassium uptake protein TrkH (NCBI ptt file) - strong
SO0029 trkA potassium uptake protein TrkA (NCBI ptt file) - strong
SO0030 sun sun protein (NCBI ptt file) - sig.
SO0031 fmt methionyl-tRNA formyltransferase (NCBI ptt file) - no data
SO0032 def-1 polypeptide deformylase (NCBI ptt file) - sig.
SO0033 SO0033 LysM domain protein (NCBI ptt file) + insig.
SO0034 SO0034 DNA processing protein DprA, putative (NCBI ptt file) + insig.
SO0035 smg smg protein (NCBI ptt file) + strong
SO0036 SO0036 topoisomerase DNA-binding C4 zinc finger domain protein (NCBI ptt file) + sig.
SO0037 SO0037 Sua5/YciO/YrdC/YwlC family protein (NCBI ptt file) + no data
SO0038 hemF coproporphyrinogen III oxidase, aerobic (NCBI ptt file) + strong

Or browse nearby genes

Or see the comparative fitness browser