Experiments in Bacteroides thetaiotaomicron VPI-5482 for carbon source

Name Group Condition Description
set31S43 carbon source (+)-Arabinogalactan (+)-Arabinogalactan; autoclaved 5 mg/ml (C)
set31S44 carbon source (+)-Arabinogalactan (+)-Arabinogalactan; autoclaved 5 mg/ml (C)
set31S45 carbon source (+)-Arabinogalactan (+)-Arabinogalactan; autoclaved 2.5 mg/ml (C)
set31S47 carbon source (+)-Arabinogalactan (+)-Arabinogalactan; autoclaved 2.5 mg/ml (C)
set3IT007 carbon source (+)-Arabinogalactan (+)-Arabinogalactan (C)
set3IT023 carbon source (+)-Arabinogalactan (+)-Arabinogalactan (C)
set27S325 carbon source (+)-Arabinogalactan, Larch wood carbon source (+)-Arabinogalactan, Larch wood 10 mg/ml
set27S326 carbon source (+)-Arabinogalactan, Larch wood carbon source (+)-Arabinogalactan, Larch wood 10 mg/ml
set27S327 carbon source (+)-Arabinogalactan, Larch wood carbon source (+)-Arabinogalactan, Larch wood 10 mg/ml
set27S328 carbon source (+)-Arabinogalactan, Larch wood carbon source (+)-Arabinogalactan, Larch wood 10 mg/ml
set11IT059 carbon source 1,4-B-D-Galactobiose 1,4-B-D-Galactobiose (C)
set11IT074 carbon source 1,4-B-D-Galactobiose 1,4-B-D-Galactobiose (C)
set11IT054 carbon source 6-O-Acetyl-D-glucose 6-O-Acetyl-D-glucose (C)
set11IT069 carbon source 6-O-Acetyl-D-glucose 6-O-Acetyl-D-glucose (C)
set1IT087 carbon source a-Cyclodextrin a-Cyclodextrin (C)
set2IT015 carbon source a-Cyclodextrin a-Cyclodextrin (C)
set31S61 carbon source a-Cyclodextrin a-Cyclodextrin 2.5 mg/ml (C)
set31S62 carbon source a-Cyclodextrin a-Cyclodextrin 2.5 mg/ml (C)
set27S330 carbon source a1-Acid Glycoprotein from bovine plasma carbon source a1-Acid Glycoprotein from bovine plasma 10 mg/ml
set16IT042 carbon source Agro_defined_trehalose Agro_defined_trehalose 1x (C)
set31S19 carbon source amylopectin from maize amylopectin from maize; autoclaved 2.5 mg/ml (C)
set31S20 carbon source amylopectin from maize amylopectin from maize; autoclaved 2.5 mg/ml (C)
set3IT039 carbon source amylopectin from maize amylopectin from maize
set3IT049 carbon source amylopectin from maize amylopectin from maize
set4IT042 carbon source amylopectin from maize amylopectin from maize (C)
set4IT043 carbon source amylopectin from maize amylopectin from maize (C)
set31S3 carbon source Amylopectin from Potato Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
set31S4 carbon source Amylopectin from Potato Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
set31S5 carbon source Amylopectin from Potato Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
set31S6 carbon source Amylopectin from Potato Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
set3IT047 carbon source Amylose from potato Amylose from potato
set3IT057 carbon source Amylose from potato Amylose from potato
set31S7 carbon source b-Glucan from Beet (1,2-b-Glucan) b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)
set31S8 carbon source b-Glucan from Beet (1,2-b-Glucan) b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)
set32S100 carbon source B-glucan from yeast B-glucan from yeast; autoclaved 2.5 mg/ml (C)
set32S99 carbon source B-glucan from yeast B-glucan from yeast; autoclaved 2.5 mg/ml (C)
set31S23 carbon source beta-Cyclodextrin beta-Cyclodextrin 2.5 mg/ml (C)
set31S24 carbon source beta-Cyclodextrin beta-Cyclodextrin 2.5 mg/ml (C)
set1IT078 carbon source Beta-Lactose Beta-Lactose (C)
set2IT007 carbon source Beta-Lactose Beta-Lactose (C)
set32S119 carbon source Beta-Lactose Beta-Lactose 2.5 mg/ml (C)
set32S120 carbon source Beta-Lactose Beta-Lactose 2.5 mg/ml (C)
set31S51 carbon source Chondroitin sulfate A sodium salt from bovine trachea Chondroitin sulfate A from bovine trachea; filtered 2.5 mg/ml (C)
set31S52 carbon source Chondroitin sulfate A sodium salt from bovine trachea Chondroitin sulfate A from bovine trachea; filtered 2.5 mg/ml (C)
set3IT008 carbon source Chondroitin sulfate A sodium salt from bovine trachea Chondroitin sulfate A from bovine trachea (C)
set3IT024 carbon source Chondroitin sulfate A sodium salt from bovine trachea Chondroitin sulfate A from bovine trachea (C)
set1IT074 carbon source D-Arabinose D-Arabinose (C)
set2IT004 carbon source D-Arabinose D-Arabinose (C)
set1IT079 carbon source D-Fructose D-Fructose (C)
set2IT008 carbon source D-Fructose D-Fructose (C)
set31S65 carbon source D-Fructose D-Fructose 2.5 mg/ml (C)
set31S66 carbon source D-Fructose D-Fructose 2.5 mg/ml (C)
set1IT092 carbon source D-Galactose D-Galactose (C)
set2IT019 carbon source D-Galactose D-Galactose (C)
set31S67 carbon source D-Galactose D-Galactose 2.5 mg/ml (C)
set31S68 carbon source D-Galactose D-Galactose 2.5 mg/ml (C)
set1IT088 carbon source D-Galacturonic Acid monohydrate D-Galacturonic Acid (C)
set1IT096 carbon source D-Galacturonic Acid monohydrate D-Galacturonic Acid (C)
set1IT095 carbon source D-Glucosamine Hydrochloride D-Glucosamine Hydrochloride (C)
set16IT038 carbon source D-Glucose D-Glucose 20mM (C)
set16IT044 carbon source D-Glucose D-Glucose 20mM (C)
set1IT071 carbon source D-Glucose D-Glucose (C)
set1IT072 carbon source D-Glucose D-Glucose (C)
set1IT073 carbon source D-Glucose D-Glucose (C)
set1IT083 carbon source D-Glucose D-Glucose (C)
set26IT064 carbon source D-Glucose D-Glucose (C)
set26IT065 carbon source D-Glucose D-Glucose (C)
set31S33 carbon source D-Glucose D-Glucose 5 mg/ml (C)
set31S34 carbon source D-Glucose D-Glucose 5 mg/ml (C)
set31S71 carbon source D-Glucose D-Glucose 2.5 mg/ml (C)
set31S72 carbon source D-Glucose D-Glucose 2.5 mg/ml (C)
set4IT047 carbon source D-Glucose D-Glucose (C)
set4IT048 carbon source D-Glucose D-Glucose (C)
set4IT049 carbon source D-Glucose D-Glucose (C)
set4IT050 carbon source D-Glucose D-Glucose (C)
set4IT053 carbon source D-Glucose; L-Arginine D-Glucose (C) with L-Arginine
set4IT055 carbon source D-Glucose; L-Threonine D-Glucose (C) with L-Threonine
set4IT056 carbon source D-Glucose; 20AA_mix D-Glucose (C) with 20 amino mix
set4IT057 carbon source D-Glucose; 20AA_mix D-Glucose (C) with 20 amino mix
set11IT062 carbon source D-Leucrose D-Leucrose (C)
set11IT077 carbon source D-Leucrose D-Leucrose (C)
set1IT080 carbon source D-Maltose monohydrate D-Maltose (C)
set2IT009 carbon source D-Maltose monohydrate D-Maltose (C)
set1IT084 carbon source D-Mannose D-Mannose (C)
set2IT012 carbon source D-Mannose D-Mannose (C)
set31S74 carbon source D-Mannose D-Mannose 2.5 mg/ml (C)
set1IT075 carbon source D-Raffinose pentahydrate D-Raffinose (C)
set2IT005 carbon source D-Raffinose pentahydrate D-Raffinose (C)
set2IT020 carbon source D-Ribose D-Ribose (C)
set16IT041 carbon source D-Trehalose dihydrate D-Trehalose 20mM (C)
set16IT047 carbon source D-Trehalose dihydrate D-Trehalose 20mM (C)
set1IT077 carbon source D-Trehalose dihydrate D-Trehalose (C)
set2IT006 carbon source D-Trehalose dihydrate D-Trehalose (C)
set1IT086 carbon source D-Xylose D-Xylose (C)
set2IT014 carbon source D-Xylose D-Xylose (C)
set31S75 carbon source D-Xylose D-Xylose 2.5 mg/ml (C)
set31S76 carbon source D-Xylose D-Xylose 2.5 mg/ml (C)
set3IT009 carbon source dextran, Mw ~200,000 dextran, Mw ~200,000 (C)
set3IT025 carbon source dextran, Mw ~200,000 dextran, Mw ~200,000 (C)
set31S53 carbon source dextran, Mw ~200,000; autoclaved dextran, Mw ~200,000; autoclaved 2.5 mg/ml (C)
set31S54 carbon source dextran, Mw ~200,000; autoclaved dextran, Mw ~200,000; autoclaved 2.5 mg/ml (C)
set31S55 carbon source dextran, Mw ~200,000; filtered dextran, Mw ~200,000; filtered 2.5 mg/ml (C)
set31S56 carbon source dextran, Mw ~200,000; filtered dextran, Mw ~200,000; filtered 2.5 mg/ml (C)
set31S21 carbon source Dextrin from potato starch Dextrin from potato starch; autoclaved 2.5 mg/ml (C)
set31S22 carbon source Dextrin from potato starch Dextrin from potato starch; autoclaved 2.5 mg/ml (C)
set11IT065 carbon source Fructooligosaccharides (FOS) Fructooligosaccharides (FOS) (C)
set11IT080 carbon source Fructooligosaccharides (FOS) Fructooligosaccharides (FOS) (C)
set31S35 carbon source Galactan from Potato Galactan from Potato; autoclaved 2.5 mg/ml (C)
set31S36 carbon source Galactan from Potato Galactan from Potato; autoclaved 2.5 mg/ml (C)
set31S37 carbon source Galactan from Potato Galactan from Potato; filtered 2.5 mg/ml (C)
set31S38 carbon source Galactan from Potato Galactan from Potato; filtered 2.5 mg/ml (C)
set31S39 carbon source Glycogen Glycogen; autoclaved 2.5 mg/ml (C)
set31S40 carbon source Glycogen Glycogen; autoclaved 2.5 mg/ml (C)
set31S41 carbon source Glycogen Glycogen; filtered 2.5 mg/ml (C)
set31S42 carbon source Glycogen Glycogen; filtered 2.5 mg/ml (C)
set4IT038 carbon source Heparin sodium salt from porcine intestinal mucosa Heparin from porcine intestinal mucosa (C)
set4IT039 carbon source Heparin sodium salt from porcine intestinal mucosa Heparin from porcine intestinal mucosa (C)
set3IT014 carbon source Hyaluronic acid sodium salt from Streptococcus equi Hyaluronic from Streptococcus equi (C)
set3IT030 carbon source Hyaluronic acid sodium salt from Streptococcus equi Hyaluronic from Streptococcus equi (C)
set3IT040 carbon source Hyaluronic acid sodium salt from Streptococcus equi Hyaluronic from Streptococcus equi
set3IT050 carbon source Hyaluronic acid sodium salt from Streptococcus equi Hyaluronic from Streptococcus equi
set11IT053 carbon source Isomaltose Isomaltose (C)
set1IT091 carbon source L-Arabinose L-Arabinose (C)
set2IT018 carbon source L-Arabinose L-Arabinose (C)
set1IT076 carbon source L-Fucose L-Fucose (C)
set1IT094 carbon source L-Fucose L-Fucose (C)
set1IT081 carbon source L-Rhamnose monohydrate L-Rhamnose (C)
set2IT010 carbon source L-Rhamnose monohydrate L-Rhamnose (C)
set16IT039 carbon source Lactulose Lactulose 20mM (C)
set16IT045 carbon source Lactulose Lactulose 20mM (C)
set11IT058 carbon source Laminaribiose Laminaribiose (C)
set11IT073 carbon source Laminaribiose Laminaribiose (C)
set31S63 carbon source Levan - from Erwinia herbicola Levan - from Erwinia herbicola; autoclaved 2.5 mg/ml (C)
set31S64 carbon source Levan - from Erwinia herbicola Levan - from Erwinia herbicola; autoclaved 2.5 mg/ml (C)
set3IT015 carbon source Levan - from Erwinia herbicola Levan - from Erwinia herbicola (C)
set3IT031 carbon source Levan - from Erwinia herbicola Levan - from Erwinia herbicola (C)
set3IT051 carbon source Levan - from Erwinia herbicola Levan - from Erwinia herbicola
set16IT040 carbon source Maltitol Maltitol 20mM (C)
set16IT046 carbon source Maltitol Maltitol 20mM (C)
set11IT056 carbon source Maltohexaose Maltohexaose (C)
set11IT071 carbon source Maltohexaose Maltohexaose (C)
set11IT055 carbon source Maltotetraose Maltotetraose (C)
set11IT070 carbon source Maltotetraose Maltotetraose (C)
set31S57 carbon source Mannan from Saccharomyces cerevisiae Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)
set31S58 carbon source Mannan from Saccharomyces cerevisiae Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)
set32S107 carbon source Mannan from Saccharomyces cerevisiae Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C)
set32S108 carbon source Mannan from Saccharomyces cerevisiae Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C)
set3IT012 carbon source Mannan from Saccharomyces cerevisiae Mannan from Saccharomyces cerevisiae (C)
set3IT028 carbon source Mannan from Saccharomyces cerevisiae Mannan from Saccharomyces cerevisiae (C)
set11IT067 carbon source Melibiose Melibiose (C)
set11IT082 carbon source Melibiose Melibiose (C)
set27S309 carbon source Mucin from porcine stomach type III carbon source Mucin from porcine stomach type III 10 mg/ml
set27S310 carbon source Mucin from porcine stomach type III carbon source Mucin from porcine stomach type III 10 mg/ml
set27S311 carbon source Mucin from porcine stomach type III carbon source Mucin from porcine stomach type III 10 mg/ml
set27S312 carbon source Mucin from porcine stomach type III carbon source Mucin from porcine stomach type III 10 mg/ml
set31S93 carbon source Mucin from porcine stomach type III Mucin from porcine stomach type III; autoclaved 2.5 mg/ml (C)
set31S94 carbon source Mucin from porcine stomach type III Mucin from porcine stomach type III; autoclaved 2.5 mg/ml (C)
set1IT089 carbon source N-Acetyl-D-Glucosamine NAG (C)
set26IT066 carbon source N-Acetyl-D-Glucosamine NAG (C)
set26IT067 carbon source N-Acetyl-D-Glucosamine NAG (C)
set2IT016 carbon source N-Acetyl-D-Glucosamine NAG (C)
set31S77 carbon source N-Acetyl-D-Glucosamine NAG 2.5 mg/ml (C)
set31S78 carbon source N-Acetyl-D-Glucosamine NAG 2.5 mg/ml (C)
set27S329 carbon source Oat flour B-glucan carbon source Oat flour B-glucan 10 mg/ml
set11IT066 carbon source palatinose hydrate palatinose (C)
set11IT081 carbon source palatinose hydrate palatinose (C)
set31S10 carbon source Pectic galactan from potato Pectic galactan from potato; autoclaved 2.5 mg/ml (C)
set31S11 carbon source Pectic galactan from potato Pectic galactan from potato; filtered 2.5 mg/ml (C)
set31S12 carbon source Pectic galactan from potato Pectic galactan from potato; filtered 2.5 mg/ml (C)
set31S9 carbon source Pectic galactan from potato Pectic galactan from potato; autoclaved 2.5 mg/ml (C)
set3IT018 carbon source Pectin Pectin (C)
set3IT034 carbon source Pectin Pectin (C)
set3IT044 carbon source Pectin Pectin
set31S17 carbon source Pectin from apple Pectin from apple; autoclaved 2.5 mg/ml (C)
set31S18 carbon source Pectin from apple Pectin from apple; autoclaved 2.5 mg/ml (C)
set31S95 carbon source Pectin from apple Pectin from apple; filtered 1 mg/ml (C)
set31S96 carbon source Pectin from apple Pectin from apple; filtered 1 mg/ml (C)
set32S113 carbon source Pectin from citrus peel Pectin from citrus peel; autoclaved 2.5 mg/ml (C)
set32S114 carbon source Pectin from citrus peel Pectin from citrus peel; autoclaved 2.5 mg/ml (C)
set31S13 carbon source polygalacturonic acid polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C)
set31S14 carbon source polygalacturonic acid polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C)
set31S15 carbon source polygalacturonic acid polygalacturonic (ultrapure); filtered 2.5 mg/ml (C)
set31S16 carbon source polygalacturonic acid polygalacturonic (ultrapure); filtered 2.5 mg/ml (C)
set32S111 carbon source polygalacturonic acid polygalacturonic; autoclaved 2.5 mg/ml (C)
set32S112 carbon source polygalacturonic acid polygalacturonic; autoclaved 2.5 mg/ml (C)
set3IT017 carbon source polygalacturonic acid polygalacturonic (C)
set3IT043 carbon source polygalacturonic acid polygalacturonic
set31S27 carbon source Pullulan Pullulan; autoclaved 2.5 mg/ml (C)
set31S28 carbon source Pullulan Pullulan; autoclaved 2.5 mg/ml (C)
set31S29 carbon source Red Arabinan from sugar-beet Red Arabinan from sugar-beet; filtered 5 mg/ml (C)
set31S30 carbon source Red Arabinan from sugar-beet Red Arabinan from sugar-beet; filtered 5 mg/ml (C)
set31S31 carbon source Red Arabinan from sugar-beet Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C)
set31S32 carbon source Red Arabinan from sugar-beet Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C)
set32S101 carbon source Red Arabinan from sugar-beet Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C)
set32S102 carbon source Red Arabinan from sugar-beet Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C)
set3IT019 carbon source Red Arabinan from sugar-beet Red Arabinan from sugar-beet (C)
set3IT035 carbon source Red Arabinan from sugar-beet Red Arabinan from sugar-beet (C)
set3IT045 carbon source Red Arabinan from sugar-beet Red Arabinan from sugar-beet
set11IT061 carbon source Rhamnogalacturonan - from potato Rhamnogalacturonan - from potato (C)
set11IT076 carbon source Rhamnogalacturonan - from potato Rhamnogalacturonan - from potato (C)
set32S109 carbon source Rhamnogalacturonan - from potato Rhamnogalacturonan - from potato; autoclaved 2.5 mg/ml (C)
set32S110 carbon source Rhamnogalacturonan - from potato Rhamnogalacturonan - from potato; autoclaved 2.5 mg/ml (C)
set27S293 carbon source Rhamnogalacturonan-II from apple juice concentrate carbon source Rhamnogalacturonan-II from apple juice concentrate 10 mg/ml
set27S294 carbon source Rhamnogalacturonan-II from apple juice concentrate carbon source Rhamnogalacturonan-II from apple juice concentrate 10 mg/ml
set27S295 carbon source Rhamnogalacturonan-II from apple juice concentrate carbon source Rhamnogalacturonan-II from apple juice concentrate 10 mg/ml
set27S296 carbon source Rhamnogalacturonan-II from apple juice concentrate carbon source Rhamnogalacturonan-II from apple juice concentrate 10 mg/ml
set27S305 carbon source Rhamnogalacturonan-II from apple juice concentrate carbon source Rhamnogalacturonan-II from apple juice concentrate 10 mg/ml
set27S307 carbon source Rhamnogalacturonan-II from apple juice concentrate carbon source Rhamnogalacturonan-II from apple juice concentrate 10 mg/ml
set27S308 carbon source Rhamnogalacturonan-II from apple juice concentrate carbon source Rhamnogalacturonan-II from apple juice concentrate 10 mg/ml
set11IT063 carbon source Stachyose - 70% Stachyose - 70% (C)
set11IT078 carbon source Stachyose - 70% Stachyose - 70% (C)
set31S59 carbon source Starch Starch soluble; autoclaved 2.5 mg/ml (C)
set31S60 carbon source Starch Starch soluble; autoclaved 2.5 mg/ml (C)
set3IT056 carbon source Starch Starch from potato
set4IT044 carbon source Starch Starch from potato (C)
set4IT045 carbon source Starch Starch from potato (C)
set16IT043 carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (~7.5 mM 3-keto-trehalose) Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (~7.5 mM 3-keto-trehalose) 0.5x (C)
set16IT049 carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (~7.5 mM 3-keto-trehalose) Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (~7.5 mM 3-keto-trehalose) 0.5x (C)
set31S25 carbon source Xylan from corn core Xylan from corn core; autoclaved 2.5 mg/ml (C)
set31S26 carbon source Xylan from corn core Xylan from corn core; autoclaved 2.5 mg/ml (C)


Or see all specific phenotypes in carbon source experiments for Bacteroides thetaiotaomicron VPI-5482