Experiments in Paraburkholderia bryophila 376MFSha3.1 for date 5/2/18

Organism Name Group Condition Description
Paraburkholderia bryophila 376MFSha3.1 set4IT073 carbon source 2'-Deoxyinosine 2'-Deoxyinosine 10 mM (C)
Paraburkholderia bryophila 376MFSha3.1 set4IT082 carbon source 2'-Deoxyinosine 2'-Deoxyinosine 10 mM (C)
Paraburkholderia bryophila 376MFSha3.1 set4IT074 carbon source 2'-Deoxyinosine 2'-Deoxyinosine 5 mM (C)
Paraburkholderia bryophila 376MFSha3.1 set4IT083 carbon source 2'-Deoxyinosine 2'-Deoxyinosine 5 mM (C)
Paraburkholderia bryophila 376MFSha3.1 set4IT078 carbon source 2-Deoxy-D-Ribose 2-Deoxy-D-Ribose 10 mM (C)
Paraburkholderia bryophila 376MFSha3.1 set4IT087 carbon source 2-Deoxy-D-Ribose 2-Deoxy-D-Ribose 10 mM (C)
Paraburkholderia bryophila 376MFSha3.1 set4IT077 carbon source 2-Deoxy-D-Ribose 2-Deoxy-D-Ribose 20 mM (C)
Paraburkholderia bryophila 376MFSha3.1 set4IT086 carbon source 2-Deoxy-D-Ribose 2-Deoxy-D-Ribose 20 mM (C)
Paraburkholderia bryophila 376MFSha3.1 set4IT075 carbon source 2-Deoxy-D-ribonic acid lithium salt 2-Deoxy-D-ribonic lithium salt 10 mM (C)
Paraburkholderia bryophila 376MFSha3.1 set4IT084 carbon source 2-Deoxy-D-ribonic acid lithium salt 2-Deoxy-D-ribonic lithium salt 10 mM (C)
Paraburkholderia bryophila 376MFSha3.1 set4IT072 carbon source 2-Deoxyadenosine 5-monophosphate 2-Deoxyadenosine 5-monophosphate 2.5 mM (C)
Paraburkholderia bryophila 376MFSha3.1 set4IT081 carbon source 2-Deoxyadenosine 5-monophosphate 2-Deoxyadenosine 5-monophosphate 2.5 mM (C)
Paraburkholderia bryophila 376MFSha3.1 set4IT071 carbon source 2-Deoxyadenosine 5-monophosphate 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Paraburkholderia bryophila 376MFSha3.1 set4IT080 carbon source 2-Deoxyadenosine 5-monophosphate 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Paraburkholderia bryophila 376MFSha3.1 set4IT079 carbon source D-Glucose D-Glucose 20 mM (C)
Paraburkholderia bryophila 376MFSha3.1 set4IT088 carbon source D-Glucose D-Glucose 20 mM (C)
Paraburkholderia bryophila 376MFSha3.1 set4IT076 carbon source Deoxyribonucleic acid from herring sperm Deoxyribonucleic from herring sperm 10 mg/mL (C)
Paraburkholderia bryophila 376MFSha3.1 set4IT085 carbon source Deoxyribonucleic acid from herring sperm Deoxyribonucleic from herring sperm 10 mg/mL (C)
Paraburkholderia bryophila 376MFSha3.1 set4IT092 ecofab LB in EcoFAB_3.5mL
Paraburkholderia bryophila 376MFSha3.1 set3IT066 supernatant Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x
Paraburkholderia bryophila 376MFSha3.1 set4IT091 supernatant Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x
Paraburkholderia bryophila 376MFSha3.1 set3IT053 supernatant Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x; and D-Glucose 99.9 mM
Paraburkholderia bryophila 376MFSha3.1 set3IT051 supernatant Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM
Paraburkholderia bryophila 376MFSha3.1 set3IT075 supernatant Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM
Paraburkholderia bryophila 376MFSha3.1 set3IT050 supernatant Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM
Paraburkholderia bryophila 376MFSha3.1 set3IT049 supernatant Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM
Paraburkholderia bryophila 376MFSha3.1 set3IT060 supernatant Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x
Paraburkholderia bryophila 376MFSha3.1 set3IT055 supernatant Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x
Paraburkholderia bryophila 376MFSha3.1 set3IT079 supernatant Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x
Paraburkholderia bryophila 376MFSha3.1 set3IT054 supernatant Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x
Paraburkholderia bryophila 376MFSha3.1 set3IT078 supernatant Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x
Paraburkholderia bryophila 376MFSha3.1 set3IT061 supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x
Paraburkholderia bryophila 376MFSha3.1 set3IT085 supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x