Experiments in Paraburkholderia graminis OAS925 for date 26-Aug-21
| Organism | Name | Group | Condition | Description |
|---|---|---|---|---|
| Paraburkholderia graminis OAS925 | set11IT060 | biofilm | Time0_Wash=None; Attachment_time=48hrs; Attachment_surface=Wells_of_96well_deepwell_plate; Biofilm_growth_time=48hrs; Biofilm_growth_media=R2A; Sample_type=attached; Outgrowth=None | biofilm; attached cells from 96 well plate assay in R2A |
| Paraburkholderia graminis OAS925 | set11IT078 | biofilm | Time0_Wash=None; Attachment_time=48hrs; Attachment_surface=Wells_of_96well_deepwell_plate; Biofilm_growth_time=48hrs; Biofilm_growth_media=R2A; Sample_type=attached; Outgrowth=None | biofilm; attached cells from 96 well plate assay in R2A |
| Paraburkholderia graminis OAS925 | set11IT059 | biofilm | Time0_Wash=None; Attachment_time=48hrs; Attachment_surface=Wells_of_96well_deepwell_plate; Biofilm_growth_time=48hrs; Biofilm_growth_media=R2A; Sample_type=planktonic; Outgrowth=None | biofilm; planktonic cells from 96 well plate assay in R2A |
| Paraburkholderia graminis OAS925 | set11IT077 | biofilm | Time0_Wash=None; Attachment_time=48hrs; Attachment_surface=Wells_of_96well_deepwell_plate; Biofilm_growth_time=48hrs; Biofilm_growth_media=R2A; Sample_type=planktonic; Outgrowth=None | biofilm; planktonic cells from 96 well plate assay in R2A |
| Paraburkholderia graminis OAS925 | set11IT061 | biofilm | Time0_Wash=None; Attachment_time=48hrs; Attachment_surface=Wells_of_96well_deepwell_plate; Biofilm_growth_time=48hrs; Biofilm_growth_media=R2A_with_C30; Sample_type=planktonic; Outgrowth=None | biofilm; planktonic cells from 96 well plate assay in R2A with C30 compound |
| Paraburkholderia graminis OAS925 | set11IT079 | biofilm | Time0_Wash=None; Attachment_time=48hrs; Attachment_surface=Wells_of_96well_deepwell_plate; Biofilm_growth_time=48hrs; Biofilm_growth_media=R2A_with_C30; Sample_type=planktonic; Outgrowth=None | biofilm; planktonic cells from 96 well plate assay in R2A with C30 compound |
| Paraburkholderia graminis OAS925 | set11IT049 | carbon source | Fumaric acid | fumaric 20mM |
| Paraburkholderia graminis OAS925 | set11IT067 | carbon source | Fumaric acid | fumaric 20mM |
| Paraburkholderia graminis OAS925 | set11IT051 | carbon source | Shikimic Acid | shik 20mM |
| Paraburkholderia graminis OAS925 | set11IT069 | carbon source | Shikimic Acid | shik 20mM |
| Paraburkholderia graminis OAS925 | set11IT050 | carbon source | Shikimic Acid | shik 5mM |
| Paraburkholderia graminis OAS925 | set11IT068 | carbon source | Shikimic Acid | shik 5mM |
| Paraburkholderia graminis OAS925 | set11IT007 | in planta | Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days | Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days |
| Paraburkholderia graminis OAS925 | set11IT001 | in planta | Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days | Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days |
| Paraburkholderia graminis OAS925 | set11IT004 | in planta | Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days | Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days |
| Paraburkholderia graminis OAS925 | set11IT009 | in planta | Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days | Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days |
| Paraburkholderia graminis OAS925 | set11IT027 | in planta | Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days | Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days |
| Paraburkholderia graminis OAS925 | set11IT030 | in planta | Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days | Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days |
| Paraburkholderia graminis OAS925 | set11IT021 | in planta | Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days | Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days |
| Paraburkholderia graminis OAS925 | set11IT024 | in planta | Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days | Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days |
| Paraburkholderia graminis OAS925 | set11IT036 | in planta | Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days | Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days |
| Paraburkholderia graminis OAS925 | set11IT037 | in planta | Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days | Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days |
| Paraburkholderia graminis OAS925 | set11IT034 | in planta | Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days | Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days |
| Paraburkholderia graminis OAS925 | set11IT035 | in planta | Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days | Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days |
| Paraburkholderia graminis OAS925 | set11IT053 | nitrogen source | Histamine | histamine 2mM N source |
| Paraburkholderia graminis OAS925 | set11IT071 | nitrogen source | Histamine | histamine 2mM N source |
| Paraburkholderia graminis OAS925 | set11IT054 | nitrogen source | Histamine | histamine 5mM N source |
| Paraburkholderia graminis OAS925 | set11IT072 | nitrogen source | Histamine | histamine 5mM N source |
| Paraburkholderia graminis OAS925 | set11IT063 | pH | R2A pH 5.8 | |
| Paraburkholderia graminis OAS925 | set11IT046 | pH | R2A pH 8.3 | |
| Paraburkholderia graminis OAS925 | set11IT064 | pH | R2A pH 8.3 | |
| Paraburkholderia graminis OAS925 | set11IT047 | r2a outgrowth control | R2A outgrowth control | |
| Paraburkholderia graminis OAS925 | set11IT057 | stress | limonene | Growth in presence of limonene |
| Paraburkholderia graminis OAS925 | set11IT058 | stress | limonene | Growth in presence of limonene |
| Paraburkholderia graminis OAS925 | set11IT075 | stress | limonene | Growth in presence of limonene |
| Paraburkholderia graminis OAS925 | set11IT076 | stress | limonene | Growth in presence of limonene |
| Paraburkholderia graminis OAS925 | set11IT055 | stress | pinene | Growth in presence of pinene |
| Paraburkholderia graminis OAS925 | set11IT056 | stress | pinene | Growth in presence of pinene |
| Paraburkholderia graminis OAS925 | set11IT073 | stress | pinene | Growth in presence of pinene |
| Paraburkholderia graminis OAS925 | set11IT074 | stress | pinene | Growth in presence of pinene |