Experiment setAIT089 for Pseudomonas fluorescens FW300-N2E2

Compare to:

Cytidine nitrogen source

Genes with specific phenotypes:

  gene name fitness t score description  
Pf6N2E2_1189 -3.3 -7.2 Thioredoxin reductase (EC 1.8.1.9) compare
Pf6N2E2_1190 -2.6 -7.4 Glutamine-dependent 2-keto-4-methylthiobutyrate transaminase compare
Pf6N2E2_2530 -2.6 -10.7 Sensory box/GGDEF family protein compare
Pf6N2E2_34 -2.6 -5.6 Cytosine deaminase (EC 3.5.4.1) conserved
Pf6N2E2_1191 -2.0 -6.7 Thiaminase II (EC 3.5.99.2) compare
Pf6N2E2_2732 -1.6 -5.4 Transcriptional regulator, LysR family compare
Pf6N2E2_3463 -1.6 -7.1 Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18) conserved
Pf6N2E2_2888 -1.6 -7.9 Glucose-selective porin OprB compare
Pf6N2E2_5277 -1.6 -5.5 FIG00953110: hypothetical protein compare
Pf6N2E2_148 -1.4 -5.8 Membrane fusion component of tripartite multidrug resistance system compare
Pf6N2E2_149 -1.4 -6.6 Inner membrane component of tripartite multidrug resistance system compare
Pf6N2E2_1072 -1.3 -5.2 LmbE-like protein compare
Pf6N2E2_4790 -1.1 -8.2 sensory box/GGDEF domain/EAL domain protein compare
Pf6N2E2_5083 -1.0 -8.0 Serine hydroxymethyltransferase (EC 2.1.2.1) compare
Pf6N2E2_3464 -1.0 -5.3 LysR family transcriptional regulator PA0133 compare
Pf6N2E2_4194 +1.2 8.6 Two-component response regulator compare
Pf6N2E2_1678 +1.2 8.3 Major facilitator family transporter compare
Pf6N2E2_3456 +1.3 8.9 Inner membrane protein YfiN compare
Pf6N2E2_4028 +1.3 8.0 Biofilm PGA synthesis auxiliary protein PgaD compare
Pf6N2E2_4193 +1.3 9.6 Signal transduction histidine kinase compare
Pf6N2E2_4030 +1.4 10.4 Biofilm PGA synthesis deacetylase PgaB (EC 3.-) compare
Pf6N2E2_3983 +1.4 8.0 Membrane bound c-di-GMP receptor LapD compare
Pf6N2E2_4031 +1.4 11.7 Biofilm PGA outer membrane secretin PgaA compare
Pf6N2E2_5491 +1.4 10.6 FOG: GGDEF domain compare
Pf6N2E2_4029 +1.5 9.7 Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-) compare
Pf6N2E2_2587 +1.7 12.9 Serine phosphatase RsbU, regulator of sigma subunit compare


Specific phenotypes for nitrogen source Cytidine across organisms