Experiment setAIT083 for Pseudomonas fluorescens FW300-N2E2

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Gly-Glu nitrogen source

Genes with specific phenotypes:

  gene name fitness t score description  
Pf6N2E2_3312 -4.4 -6.0 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) conserved
Pf6N2E2_3311 -4.1 -7.4 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) conserved
Pf6N2E2_3314 -3.8 -12.8 Dipeptide transport ATP-binding protein DppF (TC 3.A.1.5.2) conserved
Pf6N2E2_3307 -3.8 -11.1 Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) conserved
Pf6N2E2_5558 -3.7 -11.3 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) conserved
Pf6N2E2_148 -2.1 -8.9 Membrane fusion component of tripartite multidrug resistance system compare
Pf6N2E2_3586 -2.0 -7.2 NAD synthetase (EC 6.3.1.5) compare
Pf6N2E2_2888 -2.0 -10.0 Glucose-selective porin OprB compare
Pf6N2E2_2120 -2.0 -9.5 Alpha-amylase (EC 3.2.1.1) conserved
Pf6N2E2_3871 -1.8 -10.6 FIG00553872: hypothetical protein compare
Pf6N2E2_149 -1.8 -7.5 Inner membrane component of tripartite multidrug resistance system compare
Pf6N2E2_4813 -1.5 -7.4 Probable two-component sensor, near polyamine transporter compare
Pf6N2E2_2960 -1.5 -9.0 ABC transporter for L-Lysine, permease component 2 (from data) compare
Pf6N2E2_2959 -1.4 -6.8 ABC transporter for L-Lysine, permease component 1 (from data) compare
Pf6N2E2_2958 -1.3 -6.7 ABC transporter for L-Lysine, periplasmic substrate-binding component (from data) compare
Pf6N2E2_147 -1.3 -7.4 Outer membrane component of tripartite multidrug resistance system compare
Pf6N2E2_3306 +1.6 10.1 Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) conserved
Pf6N2E2_2456 +2.1 10.2 Transcriptional regulator, LysR family compare
Pf6N2E2_164 +2.1 12.0 Ribose operon repressor conserved
Pf6N2E2_3114 +2.3 15.2 Transcriptional regulator, TetR family conserved
Pf6N2E2_2455 +2.3 14.1 FIG00953957: hypothetical protein compare
Pf6N2E2_2194 +3.1 19.4 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) compare
Pf6N2E2_165 +3.2 16.1 Ribokinase (EC 2.7.1.15) conserved


Specific phenotypes for nitrogen source Gly-Glu across organisms