Experiment setAIT075 for Pseudomonas fluorescens FW300-N2E2

Compare to:

Glycine nitrogen source

Genes with specific phenotypes:

  gene name fitness t score description  
Pf6N2E2_5556 -6.0 -5.9 Aminomethyltransferase (EC 2.1.2.10) (from data) conserved
Pf6N2E2_5558 -5.0 -10.7 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) conserved
Pf6N2E2_3621 -4.9 -10.5 putative transporter, required for glycine utilization (from data) conserved
Pf6N2E2_4412 -4.2 -12.2 Ammonium transporter conserved
Pf6N2E2_5559 -3.6 -11.2 Glycine cleavage system H protein conserved
Pf6N2E2_5557 -3.2 -12.4 L-serine ammonia-lyase (EC 4.3.1.17) (from data) conserved
Pf6N2E2_1189 -3.0 -7.2 Thioredoxin reductase (EC 1.8.1.9) compare
Pf6N2E2_1190 -2.3 -5.5 Glutamine-dependent 2-keto-4-methylthiobutyrate transaminase compare
Pf6N2E2_3620 -2.1 -6.7 Epoxyqueuosine (oQ) reductase QueG compare
Pf6N2E2_1191 -1.8 -7.2 Thiaminase II (EC 3.5.99.2) compare
Pf6N2E2_3593 -1.8 -10.1 Protein containing domains DUF404, DUF407, DUF403 compare
Pf6N2E2_2048 -1.4 -5.1 Transcriptional regulator, IclR family compare
Pf6N2E2_3592 -1.3 -6.6 Protein containing transglutaminase-like domain, putative cysteine protease compare
Pf6N2E2_4686 -1.1 -6.8 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain compare
Pf6N2E2_4704 +1.1 8.1 Dimethylglycine dehydrogenase (ferredoxin), FeS subunit DgcB (EC 1.5.7.-) (from data) compare
Pf6N2E2_5881 +1.1 7.7 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit compare
Pf6N2E2_4702 +1.4 10.8 DgcA Dimethylglycine demethylase subunit A compare


Specific phenotypes for nitrogen source Glycine across organisms