Experiment setAIT072 for Pseudomonas fluorescens FW300-N2E2

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L-Serine nitrogen source

Genes with specific phenotypes:

  gene name fitness t score description  
Pf6N2E2_5557 -3.2 -10.0 L-serine ammonia-lyase (EC 4.3.1.17) (from data) conserved
Pf6N2E2_802 -2.2 -7.9 Threonine dehydratase biosynthetic (EC 4.3.1.19) compare
Pf6N2E2_1190 -1.9 -6.1 Glutamine-dependent 2-keto-4-methylthiobutyrate transaminase compare
Pf6N2E2_4754 -1.7 -8.1 Protein rarD compare
Pf6N2E2_1191 -1.6 -6.4 Thiaminase II (EC 3.5.99.2) compare
Pf6N2E2_3684 -1.6 -7.0 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter compare
Pf6N2E2_5989 -1.6 -9.1 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) conserved
Pf6N2E2_2845 -1.6 -5.9 RNA polymerase associated protein RapA (EC 3.6.1.-) compare
Pf6N2E2_4412 -1.5 -6.2 Ammonium transporter conserved
Pf6N2E2_61 +1.0 5.9 Cys regulon transcriptional activator CysB compare
Pf6N2E2_4339 +1.1 6.0 Uncharacterized protein ImpJ/VasE compare
Pf6N2E2_4194 +1.1 6.3 Two-component response regulator compare
Pf6N2E2_4337 +1.1 7.7 Uncharacterized protein ImpI/VasC compare
Pf6N2E2_4028 +1.1 6.0 Biofilm PGA synthesis auxiliary protein PgaD compare
Pf6N2E2_4031 +1.2 8.9 Biofilm PGA outer membrane secretin PgaA compare
Pf6N2E2_4030 +1.3 8.6 Biofilm PGA synthesis deacetylase PgaB (EC 3.-) compare
Pf6N2E2_4926 +1.3 8.3 hypothetical protein compare
Pf6N2E2_4193 +1.4 9.1 Signal transduction histidine kinase compare
Pf6N2E2_4486 +1.4 6.0 Glycine cleavage system H protein compare
Pf6N2E2_2441 +1.4 6.1 putative ATP/GTP-binding protein compare
Pf6N2E2_5491 +1.4 8.3 FOG: GGDEF domain compare
Pf6N2E2_4702 +1.5 9.2 DgcA Dimethylglycine demethylase subunit A conserved
Pf6N2E2_2057 +1.5 7.6 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipi n synthases and related enzymes compare
Pf6N2E2_5556 +1.6 6.4 Aminomethyltransferase (EC 2.1.2.10) (from data) compare
Pf6N2E2_5860 +1.6 9.0 Branched-chain amino acid transport system carrier protein compare
Pf6N2E2_5025 +1.7 14.2 Sensor histidine kinase compare
Pf6N2E2_3621 +1.8 10.1 putative transporter, required for glycine utilization (from data) compare
Pf6N2E2_2587 +1.8 12.2 Serine phosphatase RsbU, regulator of sigma subunit compare
Pf6N2E2_4087 +2.1 8.7 L-asparaginase (EC 3.5.1.1) (from data) compare
Pf6N2E2_3983 +3.0 11.9 Membrane bound c-di-GMP receptor LapD compare
Pf6N2E2_5559 +3.2 6.3 Glycine cleavage system H protein compare
Pf6N2E2_4086 +4.0 32.0 sodium/alanine transporter compare
Pf6N2E2_4683 +5.8 8.7 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) compare


Specific phenotypes for nitrogen source L-Serine across organisms