Experiment setAH4 for Marinobacter adhaerens HP15

Compare to:

marine broth, 25C

200 most detrimental genes:

  gene name fitness t score description  
HP15_2972 +2.0 3.5 cyclic nucleotide-binding protein compare
HP15_3261 +1.2 8.5 efflux transporter, RND family, MFP subunit compare
HP15_3262 +1.2 10.3 multidrug resistance protein compare
HP15_3628 +1.1 1.4 hypothetical protein compare
HP15_1548 +0.9 1.5 chemotaxis protein methyltransferase CheR compare
HP15_p187g175 +0.8 4.5 conserved hypothetical protein compare
HP15_1626 +0.8 1.0 conserved hypothetical protein compare
HP15_2008 +0.8 1.3 conserved hypothetical protein compare
HP15_873 +0.7 1.5 conserved hypothetical protein compare
HP15_2638 +0.7 1.2 hypothetical protein compare
HP15_633 +0.7 2.9 dTDP-4-dehydrorhamnose reductase-like protein compare
HP15_950 +0.7 2.3 RNA polymerase, sigma-24 subunit, ECF subfamily compare
HP15_p187g176 +0.7 5.2 conserved hypothetical protein compare
HP15_1461 +0.7 1.2 ATP-binding component of ABC transporter compare
HP15_550 +0.7 4.1 phosphoheptose isomerase compare
HP15_3444 +0.6 4.4 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
HP15_3195 +0.6 3.5 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
HP15_597 +0.6 1.4 peptidase S16, lon domain protein compare
HP15_2001 +0.6 2.4 hypothetical protein compare
HP15_1777 +0.6 2.4 transcriptional regulator, TetR family compare
HP15_1900 +0.6 1.1 dTDP-4-dehydrorhamnose 3,5-epimerase compare
HP15_2763 +0.6 1.8 methyltransferase, UbiE/COQ5 family protein compare
HP15_3641 +0.6 1.7 hypothetical protein compare
HP15_311 +0.6 3.1 protein containing domain of unknown function DUF2489 compare
HP15_1187 +0.6 0.6 BolA-like protein compare
HP15_2297 +0.6 2.2 response regulator receiver modulated CheB methylesterase compare
HP15_1962 +0.6 3.0 capsid protein of prophage compare
HP15_p187g138 +0.5 0.8 hypothetical protein compare
HP15_3238 +0.5 1.7 protein containing cystathionine beta-synthase, core domain compare
HP15_2072 +0.5 2.0 conserved hypothetical protein, secreted compare
HP15_2311 +0.5 2.3 flagellar biosynthetic protein FliQ compare
HP15_3083 +0.5 1.3 hypothetical protein compare
HP15_1647 +0.5 1.1 DoxX compare
HP15_1922 +0.5 1.8 polysaccharide biosynthesis protein compare
HP15_1327 +0.5 1.5 hypothetical protein compare
HP15_1340 +0.5 1.9 GCN5-related N-acetyltransferase compare
HP15_1467 +0.5 1.9 fFlagellar basal-body rod protein FlgB compare
HP15_118 +0.5 0.7 hypothetical protein compare
HP15_3058 +0.5 2.1 leucine/isoleucine/valine transporter ATP-binding subunit compare
HP15_196 +0.5 0.9 cytochrome C-like protein compare
HP15_1753 +0.5 1.1 conserved hypothetical protein, secreted compare
HP15_2426 +0.5 2.3 NGG1p interacting factor 3, NIF3 compare
HP15_2837 +0.5 1.0 conserved hypothetical protein compare
HP15_1895 +0.5 1.4 secreted protein containing PEP-CTERM bacterial domain compare
HP15_2461 +0.5 1.2 type IV pilus assembly PilZ compare
HP15_73 +0.5 2.6 hypothetical protein compare
HP15_1879 +0.5 0.9 conserved hypothetical protein, membrane compare
HP15_3832 +0.5 2.0 hypothetical protein compare
HP15_4051 +0.5 2.1 phenylacetic acid degradation-related protein, thioesterase superfamily compare
HP15_2429 +0.5 2.8 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
HP15_p187g1 +0.5 1.3 repeat-containing protein compare
HP15_1605 +0.5 0.9 general secretion pathway protein H compare
HP15_679 +0.4 1.4 conserved hypothetical protein compare
HP15_1323 +0.4 1.1 hypothetical protein compare
HP15_694 +0.4 1.2 conserved hypothetical protein compare
HP15_1611 +0.4 1.5 GCN5-related N-acetyltransferase compare
HP15_1191 +0.4 2.2 metallo-beta-lactamase family protein compare
HP15_2071 +0.4 1.5 conserved hypothetical protein compare
HP15_1085 +0.4 1.8 conserved hypothetical protein compare
HP15_1974 +0.4 0.7 hypothetical protein compare
HP15_2327 +0.4 2.0 flagellar hook-basal body complex protein FliE compare
HP15_2801 +0.4 2.0 short-chain dehydrogenase/reductase SDR compare
HP15_69 +0.4 1.2 hypothetical protein compare
HP15_2520 +0.4 2.0 hypothetical protein compare
HP15_1446 +0.4 1.1 ribonucleotide reductase, alpha subunit compare
HP15_212 +0.4 0.7 hypothetical protein compare
HP15_522 +0.4 1.6 type IV pilus biogenesis protein-like protein compare
HP15_4087 +0.4 2.2 transcriptional regulator, GntR family compare
HP15_4057 +0.4 1.1 protein containing rhodanese-like domains compare
HP15_521 +0.4 0.8 fimbrial protein pilin compare
HP15_1781 +0.4 0.6 beta-lactamase hydrolase-like protein compare
HP15_2627 +0.4 0.9 protein containing DUF1415 compare
HP15_1454 +0.4 1.4 thioesterase domain protein compare
HP15_1263 +0.4 2.0 conserved hypothetical protein compare
HP15_p187g15 +0.4 1.8 serine phosphatase RsbU-like protein, regulator of sigma compare
HP15_3791 +0.4 1.7 lipase/esterase compare
HP15_p187g136 +0.4 2.3 hypothetical protein compare
HP15_3821 +0.4 1.5 transcriptional regulator, MarR family compare
HP15_2116 +0.4 0.8 PP-loop domain protein compare
HP15_221 +0.4 1.5 anti-RNA polymerase sigma 70 factor compare
HP15_150 +0.4 2.0 hypothetical protein compare
HP15_1104 +0.4 1.9 transposase, IS4 family protein-like protein compare
HP15_3382 +0.4 0.9 YbaK/prolyl-tRNA synthetase associated region compare
HP15_p187g98 +0.4 0.9 hypothetical protein compare
HP15_2798 +0.4 1.5 protein containing cupin 2, conserved barrel domain compare
HP15_4075 +0.4 1.3 TRAP dicarboxylate transporter, DctQ subunit compare
HP15_3123 +0.4 1.3 Na+/Ca+ antiporter, CaCA family compare
HP15_1223 +0.4 1.3 protein YaaA compare
HP15_1968 +0.4 0.9 phage DNA packaging protein, Nu1 subunit of terminase compare
HP15_875 +0.4 1.8 protein containing DUF159 compare
HP15_2508 +0.4 1.9 OmpA/MotB domain protein compare
HP15_2370 +0.4 1.7 flagellar protein FlaG protein compare
HP15_2888 +0.4 2.0 protein containing DUF162 compare
HP15_270 +0.4 1.4 RNA polymerase, sigma-24 subunit, ECF subfamily compare
HP15_1252 +0.4 0.9 small component of pyruvate transporter (TIGR03647) (from data) compare
HP15_2006 +0.4 2.1 hypothetical protein compare
HP15_1440 +0.4 1.1 cell division protein ZipA compare
HP15_3883 +0.4 1.7 Hcp protein compare
HP15_1015 +0.4 2.3 cyanate lyase compare
HP15_2978 +0.4 1.4 invasion gene expression up-regulator, SirB compare
HP15_1236 +0.4 2.6 conserved hypothetical protein compare
HP15_1936 +0.4 0.6 conserved hypothetical protein compare
HP15_p42g10 +0.4 1.1 KleE protein compare
HP15_3574 +0.4 1.4 auxin efflux Carrier compare
HP15_1492 +0.4 0.4 conserved hypothetical protein compare
HP15_4176 +0.4 1.4 electron-transferring-flavoprotein dehydrogenase compare
HP15_3456 +0.3 0.4 protein containing DUF465 compare
HP15_4010 +0.3 1.5 flagellar motor protein PomA compare
HP15_p187g139 +0.3 1.5 hypothetical protein compare
HP15_1812 +0.3 0.8 type IV pilus assembly PilZ compare
HP15_2414 +0.3 1.3 protein containing uncharacterized protein family UPF0066 domains compare
HP15_1509 +0.3 1.2 conserved hypothetical protein compare
HP15_3390 +0.3 1.4 thioesterase superfamily protein compare
HP15_1382 +0.3 1.3 M18-family aminopeptidase 2 compare
HP15_989 +0.3 1.0 conserved hypothetical protein compare
HP15_166 +0.3 2.4 cation efflux system protein compare
HP15_972 +0.3 1.3 hypothetical protein compare
HP15_p187g26 +0.3 1.5 hypothetical protein compare
HP15_2757 +0.3 1.5 conserved hypothetical protein compare
HP15_296 +0.3 1.2 conserved hypothetical protein compare
HP15_p187g18 +0.3 1.9 hypothetical protein compare
HP15_1680 +0.3 1.5 transcriptional regulator, LysR family protein compare
HP15_2117 +0.3 0.6 transcriptional regulator, TetR family protein compare
HP15_594 +0.3 1.4 peptidoglycan-binding domain 1 protein-like protein compare
HP15_1751 +0.3 1.1 conserved hypothetical protein, membrane compare
HP15_3847 +0.3 0.6 transmembrane transcriptional regulator (anti-Sigma-factor) compare
HP15_1952 +0.3 1.7 hypothetical protein compare
HP15_2272 +0.3 1.0 conserved hypothetical protein compare
HP15_636 +0.3 0.6 GTP-binding protein, ribosome biogenesis, YlqF compare
HP15_2313 +0.3 1.5 flagellar biosynthesis protein, FliO compare
HP15_3640 +0.3 1.8 conserved hypothetical protein, RES superfamily compare
HP15_1131 +0.3 1.6 alpha-L-glutamate ligase-like protein compare
HP15_16 +0.3 1.1 glyoxalase/bleomycin resistance protein/dioxygenase-like protein compare
HP15_988 +0.3 1.5 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein compare
HP15_409 +0.3 1.1 hypothetical biogenesis protein MshI-like protein compare
HP15_2636 +0.3 0.7 conserved hypothetical protein compare
HP15_1469 +0.3 1.8 flagellar hook capping protein compare
HP15_24 +0.3 1.0 membrane protein compare
HP15_1350 +0.3 0.8 ATP-binding component of a transport system compare
HP15_735 +0.3 1.7 type III effector HopPmaJ compare
HP15_908 +0.3 0.4 enoyl-CoA hydratase/isomerase compare
HP15_3813 +0.3 1.6 conserved hypothetical protein compare
HP15_3558 +0.3 0.9 conserved hypothetical protein, secreted compare
HP15_140 +0.3 0.9 hypothetical protein compare
HP15_3598 +0.3 1.8 transcriptional regulator, TetR family compare
HP15_1528 +0.3 0.5 chromosome segregation and condensation protein ScpA compare
HP15_847 +0.3 1.5 hypothetical protein compare
HP15_2073 +0.3 1.5 peptidyl-arginine deiminase family protein compare
HP15_1432 +0.3 1.4 conserved hypothetical protein, membrane compare
HP15_2241 +0.3 1.8 transaldolase compare
HP15_80 +0.3 1.4 conserved hypothetical protein compare
HP15_1278 +0.3 1.5 pseudouridylate synthase compare
HP15_434 +0.3 2.0 potassium channel protein compare
HP15_2568 +0.3 1.7 permease of the major facilitator superfamily protein compare
HP15_2488 +0.3 2.1 FAD dependent oxidoreductase compare
HP15_1468 +0.3 1.8 flagellar basal-body rod protein FlgC-like protein compare
HP15_1775 +0.3 1.7 conserved hypothetical protein compare
HP15_2877 +0.3 1.3 ABC transporter, urea, ATP-binding protein, UrtE compare
HP15_4007 +0.3 1.8 ammonium transporter compare
HP15_p42g29 +0.3 1.5 hypothetical protein compare
HP15_p187g143 +0.3 1.2 hypothetical protein compare
HP15_2209 +0.3 1.4 4-amino-4-deoxychorismate lyase compare
HP15_744 +0.3 1.7 phospholipid/glycerol acyltransferase compare
HP15_3360 +0.3 1.2 asparaginase compare
HP15_2232 +0.3 1.6 conserved hypothetical protein, membrane compare
HP15_3865 +0.3 1.9 periplasmic binding protein compare
HP15_1087 +0.3 0.8 prophage CP4-57 regulatory compare
HP15_583 +0.3 1.6 protein containing DUF833 compare
HP15_4011 +0.3 0.9 protein containing DUF1232 compare
HP15_1880 +0.3 1.3 uncharacterized conserved protein UCP006173 compare
HP15_3057 +0.3 2.0 leucine/isoleucine/valine transporter permease subunit compare
HP15_2652 +0.3 1.3 zinc/iron permease compare
HP15_1222 +0.3 0.6 conserved hypothetical protein, membrane compare
HP15_3056 +0.3 2.2 high-affinity branched-chain amino acid ABC transporter, permease protein compare
HP15_1010 +0.3 1.3 sodium-dependent transporter, NSS family protein compare
HP15_1394 +0.3 1.2 thioesterase superfamily protein compare
HP15_1808 +0.3 1.4 peptide ABC transporter, permease protein compare
HP15_1794 +0.3 0.5 secreted protein compare
HP15_4167 +0.3 1.4 conserved hypothetical protein compare
HP15_3545 +0.3 0.6 transcriptional regulator, MerR family compare
HP15_1049 +0.3 1.3 hypothetical protein compare
HP15_4061 +0.3 2.2 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component compare
HP15_1617 +0.3 1.1 hypothetical protein compare
HP15_2142 +0.3 0.9 conserved hypothetical protein, secreted compare
HP15_2326 +0.3 1.9 flagellar MS-ring protein compare
HP15_1693 +0.3 1.6 conserved hypothetical protein compare
HP15_414 +0.3 1.0 general secretion pathway protein, ATPase compare
HP15_1268 +0.3 0.6 thioredoxin compare
HP15_3775 +0.3 0.9 conserved hypothetical protein, membrane compare
HP15_3055 +0.3 1.7 high-affinity leucine-specific leucine-specific-binding periplasmic protein of high-affinity branched-chain amino acid ABC transporter transport system periplasmic binding protein compare
HP15_3735 +0.3 2.2 rhodanese domain protein-like protein compare
HP15_3825 +0.3 1.7 NfeD family protein compare
HP15_662 +0.3 1.3 phage tail protein I compare
HP15_1409 +0.3 0.3 protein containing DUF1289 compare
HP15_422 +0.3 1.4 protein containing prepilin-type cleavage/methylation, N-terminal domains compare
HP15_3092 +0.3 1.7 conserved hypothetical protein compare
HP15_1891 +0.3 1.7 two component, sigma54 specific, transcriptional regulator, Fis family compare
HP15_940 +0.3 2.0 putrescine ABC transporter, periplasmic putrescine-binding protein compare
HP15_1122 +0.3 1.2 conserved hypothetical protein, thioesterase superfamily compare
HP15_2711 +0.3 1.3 conserved hypothetical protein, membrane compare


Specific Phenotypes

For 1 genes in this experiment