Experiment set9S519 for Rhodanobacter denitrificans FW104-10B01

planktonic; Day1; NLDM;

Group: biofilm assay; planktonic sample
Media: NLDM, pH=7
Culturing: rhodanobacter_10B01_ML12
By: Mingfei on 03/15/2023

Specific Phenotypes

For 13 genes in this experiment

SEED Subsystems

Subsystem	#Specific
Biogenesis of c-type cytochromes	1
DNA repair, bacterial	1
Glycerolipid and Glycerophospholipid Metabolism in Bacteria	1
Glycine and Serine Utilization	1
Periplasmic disulfide interchange	1
Pyruvate Alanine Serine Interconversions	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

• Aminophosphonate metabolism
• High-mannose type N-glycan biosynthesis
• Nucleotide sugars metabolism
• Glycerophospholipid metabolism
• Sphingolipid metabolism

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
cardiolipin biosynthesis II	3	3	1
cardiolipin and phosphatidylethanolamine biosynthesis (Xanthomonas)	4	3	1
superpathway of cardiolipin biosynthesis (bacteria)	13	9	1