Experiment set9S382 for Enterobacter sp. TBS_079

Compare to:

Sodium butyrate carbon source

200 most important genes:

  gene name fitness t score description  
MPMX20_04028 -5.9 -2.4 hypothetical protein compare
MPMX20_00801 -5.8 -3.3 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
MPMX20_02203 -5.5 -2.6 hypothetical protein compare
MPMX20_04374 -5.1 -3.1 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_03095 -5.1 -2.0 hypothetical protein compare
MPMX20_03211 -5.0 -3.5 NADH-quinone oxidoreductase subunit I compare
MPMX20_00831 -4.9 -6.0 RNA polymerase-binding transcription factor DksA compare
MPMX20_01355 -4.8 -1.1 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_04442 -4.8 -6.5 Sec-independent protein translocase protein TatC compare
MPMX20_04444 -4.2 -1.4 Sec-independent protein translocase protein TatA compare
MPMX20_00395 -4.1 -4.1 hypothetical protein compare
MPMX20_01958 -4.1 -1.0 Fumarase D compare
MPMX20_03018 -4.1 -4.9 hypothetical protein compare
MPMX20_03509 -4.1 -1.3 hypothetical protein compare
MPMX20_03490 -4.1 -6.7 SsrA-binding protein compare
MPMX20_04427 -4.0 -0.9 5S ribosomal RNA compare
MPMX20_01548 -4.0 -5.4 putative ABC transporter ATP-binding/permease protein compare
MPMX20_03310 -3.9 -2.7 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_00453 -3.9 -2.0 RNA-binding protein Hfq compare
MPMX20_00110 -3.7 -18.4 hypothetical protein compare
MPMX20_01607 -3.7 -5.2 Outer membrane protein A compare
MPMX20_04162 -3.7 -4.6 3-dehydroquinate dehydratase compare
MPMX20_03019 -3.6 -18.5 hypothetical protein compare
MPMX20_02574 -3.6 -3.5 putative intracellular septation protein A compare
MPMX20_01549 -3.5 -4.8 ATP-binding/permease protein CydD compare
MPMX20_03334 -3.5 -1.1 hypothetical protein compare
MPMX20_03215 -3.5 -3.4 NADH-quinone oxidoreductase subunit E compare
MPMX20_02576 -3.4 -2.4 Protein TonB compare
MPMX20_01028 -3.4 -2.3 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_04440 -3.4 -1.6 Transcription antitermination protein RfaH compare
MPMX20_04768 -3.3 -19.4 hypothetical protein compare
MPMX20_04119 -3.3 -2.0 DNA polymerase III subunit chi compare
MPMX20_03022 -3.2 -3.1 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_02825 -3.2 -3.5 Cold shock-like protein CspB compare
MPMX20_01950 -3.1 -4.1 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_04642 -3.1 -2.0 Phosphate import ATP-binding protein PstB compare
MPMX20_00514 -3.0 -9.3 Fructose-1,6-bisphosphatase class 1 compare
MPMX20_00721 -3.0 -3.4 Chaperone protein DnaJ compare
MPMX20_00109 -3.0 -15.9 hypothetical protein compare
MPMX20_03226 -2.9 -2.0 Acetate kinase compare
MPMX20_03021 -2.9 -9.4 hypothetical protein compare
MPMX20_01368 -2.9 -4.8 hypothetical protein compare
MPMX20_01369 -2.9 -6.8 Tol-Pal system protein TolB compare
MPMX20_03013 -2.9 -12.4 dTDP-glucose 4,6-dehydratase compare
MPMX20_01029 -2.9 -4.3 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_04197 -2.8 -5.7 Trk system potassium uptake protein TrkA compare
MPMX20_01030 -2.8 -7.3 Lon protease compare
MPMX20_04243 -2.8 -1.1 hypothetical protein compare
MPMX20_02768 -2.8 -2.6 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_03382 -2.8 -1.9 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_01118 -2.7 -0.9 hypothetical protein compare
MPMX20_04489 -2.7 -13.2 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_02476 -2.7 -2.9 Putrescine export system permease protein SapC compare
MPMX20_04639 -2.7 -1.1 Phosphate-binding protein PstS compare
MPMX20_01434 -2.7 -1.7 putative protein YbiI compare
MPMX20_00102 -2.7 -3.9 hypothetical protein compare
MPMX20_03010 -2.6 -6.8 UDP-glucose 4-epimerase compare
MPMX20_01550 -2.6 -2.6 Thioredoxin reductase compare
MPMX20_03742 -2.6 -6.2 HTH-type transcriptional regulator GalR compare
MPMX20_03683 -2.6 -5.1 RecBCD enzyme subunit RecB compare
MPMX20_02755 -2.6 -4.3 KHG/KDPG aldolase compare
MPMX20_03213 -2.5 -7.4 NADH-quinone oxidoreductase subunit G compare
MPMX20_01361 -2.5 -6.5 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_00998 -2.5 -2.3 Sec translocon accessory complex subunit YajC compare
MPMX20_04483 -2.5 -3.8 Lipid III flippase compare
MPMX20_04670 -2.5 -2.3 hypothetical protein compare
MPMX20_02143 -2.5 -2.2 1,2-phenylacetyl-CoA epoxidase, subunit B compare
MPMX20_03210 -2.5 -4.1 NADH-quinone oxidoreductase subunit J compare
MPMX20_02344 -2.5 -1.5 hypothetical protein compare
MPMX20_00106 -2.4 -7.1 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_02766 -2.4 -3.5 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_03440 -2.4 -5.2 Elongation factor 4 compare
MPMX20_03209 -2.4 -2.8 NADH-quinone oxidoreductase subunit K compare
MPMX20_03208 -2.4 -5.0 NADH-quinone oxidoreductase subunit L compare
MPMX20_04278 -2.4 -4.5 3-dehydroquinate synthase compare
MPMX20_01362 -2.4 -4.1 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_03206 -2.4 -5.8 NADH-quinone oxidoreductase subunit N compare
MPMX20_01334 -2.4 -5.8 Phosphoglucomutase compare
MPMX20_03408 -2.3 -2.0 Co-chaperone protein HscB compare
MPMX20_00226 -2.3 -5.9 Bifunctional purine biosynthesis protein PurH compare
MPMX20_00105 -2.3 -7.0 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_02593 -2.2 -10.6 Regulator of RpoS compare
MPMX20_02591 -2.2 -4.0 DNA-binding protein H-NS compare
MPMX20_04626 -2.2 -3.8 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_01097 -2.2 -4.6 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_04465 -2.1 -4.4 Tyrosine recombinase XerC compare
MPMX20_03685 -2.1 -5.5 RecBCD enzyme subunit RecC compare
MPMX20_04077 -2.1 -5.3 Argininosuccinate synthase compare
MPMX20_03017 -2.1 -6.1 hypothetical protein compare
MPMX20_02707 -2.1 -1.9 Septum site-determining protein MinC compare
MPMX20_04650 -2.1 -3.3 tRNA modification GTPase MnmE compare
MPMX20_01741 -2.1 -4.6 Dihydroorotase compare
MPMX20_03207 -2.1 -4.6 NADH-quinone oxidoreductase subunit M compare
MPMX20_03153 -2.1 -1.0 hypothetical protein compare
MPMX20_00693 -2.1 -4.6 Phosphoserine phosphatase compare
MPMX20_01596 -2.1 -11.9 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_04275 -2.0 -2.2 Ribulose-phosphate 3-epimerase compare
MPMX20_00086 -2.0 -2.1 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_03247 -2.0 -4.3 Amidophosphoribosyltransferase compare
MPMX20_00108 -1.9 -10.5 hypothetical protein compare
MPMX20_03217 -1.9 -3.0 NADH-quinone oxidoreductase subunit B compare
MPMX20_01552 -1.9 -4.9 hypothetical protein compare
MPMX20_02287 -1.9 -1.7 hypothetical protein compare
MPMX20_02827 -1.9 -4.1 hypothetical protein compare
MPMX20_04469 -1.9 -2.9 Adenylate cyclase compare
MPMX20_00773 -1.9 -5.9 Catabolite repressor/activator compare
MPMX20_00544 -1.9 -3.6 Aspartate carbamoyltransferase catalytic subunit compare
MPMX20_00626 -1.8 -1.4 hypothetical protein compare
MPMX20_00556 -1.8 -5.3 Ornithine carbamoyltransferase subunit F compare
MPMX20_03012 -1.8 -6.5 Glucose-1-phosphate thymidylyltransferase 1 compare
MPMX20_00874 -1.8 -2.0 hypothetical protein compare
MPMX20_01366 -1.8 -1.6 Tol-Pal system protein TolQ compare
MPMX20_00093 -1.8 -4.8 Orotate phosphoribosyltransferase compare
MPMX20_00807 -1.8 -3.6 Pyruvate dehydrogenase E1 component compare
MPMX20_02478 -1.8 -5.1 Putrescine export system ATP-binding protein SapF compare
MPMX20_01901 -1.8 -1.8 Integration host factor subunit alpha compare
MPMX20_01768 -1.8 -1.8 Large ribosomal RNA subunit accumulation protein YceD compare
MPMX20_02494 -1.8 -4.9 Orotidine 5'-phosphate decarboxylase compare
MPMX20_00740 -1.8 -6.1 Carbamoyl-phosphate synthase large chain compare
MPMX20_04443 -1.8 -1.8 Sec-independent protein translocase protein TatB compare
MPMX20_01367 -1.8 -3.4 Tol-Pal system protein TolR compare
MPMX20_03354 -1.7 -3.6 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_00087 -1.7 -2.0 DNA-directed RNA polymerase subunit omega compare
MPMX20_01098 -1.7 -2.9 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_03015 -1.7 -10.8 Phosphoglucosamine mutase compare
MPMX20_03154 -1.7 -4.4 Inner membrane protein YejM compare
MPMX20_03216 -1.7 -5.0 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_04521 -1.7 -3.6 Acetylglutamate kinase compare
MPMX20_02063 -1.7 -5.6 Protein mlc compare
MPMX20_03212 -1.7 -3.7 NADH-quinone oxidoreductase subunit H compare
MPMX20_03468 -1.6 -3.1 T-protein compare
MPMX20_04276 -1.6 -4.3 DNA adenine methylase compare
MPMX20_03753 -1.6 -4.0 Tyrosine recombinase XerD compare
MPMX20_04344 -1.6 -0.8 hypothetical protein compare
MPMX20_03426 -1.6 -6.7 Phosphoribosylformylglycinamidine synthase compare
MPMX20_00708 -1.6 -2.9 Aerobic respiration control protein ArcA compare
MPMX20_04484 -1.6 -3.4 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
MPMX20_03629 -1.6 -2.5 Protein-L-isoaspartate O-methyltransferase compare
MPMX20_00745 -1.5 -2.3 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_02477 -1.5 -3.3 Peptide transport system ATP-binding protein SapD compare
MPMX20_00746 -1.5 -1.6 Protein ApaG compare
MPMX20_03214 -1.5 -3.7 NADH-quinone oxidoreductase subunit F compare
MPMX20_03407 -1.5 -2.2 Chaperone protein HscA compare
MPMX20_03969 -1.5 -1.7 hypothetical protein compare
MPMX20_01942 -1.5 -3.1 HTH-type transcriptional repressor BluR compare
MPMX20_03016 -1.5 -8.3 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_03309 -1.5 -1.6 Phosphocarrier protein HPr compare
MPMX20_01972 -1.5 -0.7 tRNA-Val compare
MPMX20_03409 -1.5 -1.4 Iron-binding protein IscA compare
MPMX20_04522 -1.5 -3.6 N-acetyl-gamma-glutamyl-phosphate reductase compare
MPMX20_04520 -1.5 -4.6 Argininosuccinate lyase compare
MPMX20_01646 -1.4 -3.6 hypothetical protein compare
MPMX20_03986 -1.4 -1.7 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_00735 -1.4 -1.9 hypothetical protein compare
MPMX20_00570 -1.4 -7.1 putative BsuMI modification methylase subunit YdiO compare
MPMX20_01433 -1.4 -3.1 putative protein McbA compare
MPMX20_04133 -1.4 -2.8 Stringent starvation protein A compare
MPMX20_02475 -1.4 -2.5 Putrescine export system permease protein SapB compare
MPMX20_01484 -1.4 -2.8 HTH-type transcriptional regulator RcdA compare
MPMX20_02442 -1.4 -1.8 hypothetical protein compare
MPMX20_03264 -1.4 -1.7 Chorismate synthase compare
MPMX20_02309 -1.4 -2.9 hypothetical protein compare
MPMX20_03590 -1.4 -1.6 hypothetical protein compare
MPMX20_04628 -1.4 -1.6 ATP synthase protein I compare
MPMX20_04556 -1.4 -3.8 Transcriptional regulatory protein CpxR compare
MPMX20_00258 -1.4 -2.3 Diacylglycerol kinase compare
MPMX20_03390 -1.4 -3.7 Outer membrane protein assembly factor BamB compare
MPMX20_02646 -1.3 -0.9 hypothetical protein compare
MPMX20_04598 -1.3 -3.3 Oxygen-independent coproporphyrinogen III oxidase compare
MPMX20_01567 -1.3 -3.4 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_03923 -1.3 -1.9 hypothetical protein compare
MPMX20_03036 -1.3 -3.0 Putative acetyltransferase compare
MPMX20_01566 -1.3 -6.1 Phosphoserine aminotransferase compare
MPMX20_02826 -1.3 -1.1 Cold shock-like protein CspB compare
MPMX20_02114 -1.3 -2.2 hypothetical protein compare
MPMX20_04029 -1.3 -1.1 Cyclic dipyrimidine nucleotide synthase compare
MPMX20_01186 -1.3 -3.0 Transcriptional activator protein ExaE compare
MPMX20_01570 -1.3 -1.3 Integration host factor subunit beta compare
MPMX20_03020 -1.3 -2.5 hypothetical protein compare
MPMX20_00521 -1.3 -1.8 hypothetical protein compare
MPMX20_01527 -1.3 -5.1 hypothetical protein compare
MPMX20_03194 -1.3 -1.6 hypothetical protein compare
MPMX20_03580 -1.3 -2.8 Protein RecA compare
MPMX20_01837 -1.3 -1.6 hypothetical protein compare
MPMX20_01156 -1.2 -1.9 hypothetical protein compare
MPMX20_01322 -1.2 -4.1 N-acetylglucosamine repressor compare
MPMX20_04194 -1.2 -1.0 Peptide deformylase compare
MPMX20_02759 -1.2 -3.5 Pyruvate kinase II compare
MPMX20_04140 -1.2 -3.1 Malate dehydrogenase compare
MPMX20_04687 -1.2 -3.9 hypothetical protein compare
MPMX20_01637 -1.2 -3.3 hypothetical protein compare
MPMX20_03391 -1.2 -1.8 hypothetical protein compare
MPMX20_00030 -1.2 -0.8 hypothetical protein compare
MPMX20_03681 -1.2 -4.7 Amino-acid acetyltransferase compare
MPMX20_03498 -1.2 -1.3 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_01734 -1.2 -3.2 Lipid A biosynthesis lauroyltransferase compare
MPMX20_01064 -1.2 -4.6 Multidrug efflux pump subunit AcrB compare
MPMX20_00241 -1.2 -3.9 Glucose-6-phosphate isomerase compare
MPMX20_01542 -1.2 -1.6 Cold shock-like protein CspD compare
MPMX20_00739 -1.2 -2.2 Carbamoyl-phosphate synthase small chain compare


Specific Phenotypes

None in this experiment

For Enterobacter sp. TBS_079 in carbon source experiments

For carbon source Sodium butyrate across organisms