Experiment set9S378 for Enterobacter sp. TBS_079

Compare to:

D-Salicin carbon source

200 most important genes:

  gene name fitness t score description  
MPMX20_00831 -7.0 -4.8 RNA polymerase-binding transcription factor DksA compare
MPMX20_00693 -6.7 -8.0 Phosphoserine phosphatase compare
MPMX20_00927 -6.7 -11.2 Glutamate 5-kinase compare
MPMX20_00928 -6.5 -7.8 Gamma-glutamyl phosphate reductase compare
MPMX20_03354 -6.5 -10.8 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_03003 -6.3 -7.5 Histidinol-phosphate aminotransferase compare
MPMX20_01566 -6.3 -14.7 Phosphoserine aminotransferase compare
MPMX20_01366 -6.3 -6.1 Tol-Pal system protein TolQ compare
MPMX20_04077 -6.3 -7.4 Argininosuccinate synthase compare
MPMX20_03338 -6.2 -4.3 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_03771 -6.2 -11.9 D-3-phosphoglycerate dehydrogenase compare
MPMX20_03426 -6.1 -11.8 Phosphoribosylformylglycinamidine synthase compare
MPMX20_03264 -6.1 -4.2 Chorismate synthase compare
MPMX20_01368 -6.1 -5.9 hypothetical protein compare
MPMX20_04499 -6.0 -13.5 Dihydroxy-acid dehydratase compare
MPMX20_04523 -6.0 -7.1 Acetylornithine deacetylase compare
MPMX20_00225 -5.8 -11.2 Phosphoribosylamine--glycine ligase compare
MPMX20_00544 -5.8 -6.9 Aspartate carbamoyltransferase catalytic subunit compare
MPMX20_03247 -5.8 -8.8 Amidophosphoribosyltransferase compare
MPMX20_00230 -5.8 -8.8 Homoserine O-succinyltransferase compare
MPMX20_03681 -5.7 -15.6 Amino-acid acetyltransferase compare
MPMX20_04520 -5.6 -7.7 Argininosuccinate lyase compare
MPMX20_03006 -5.6 -8.6 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX20_04442 -5.6 -6.6 Sec-independent protein translocase protein TatC compare
MPMX20_03001 -5.5 -11.8 ATP phosphoribosyltransferase compare
MPMX20_00226 -5.5 -10.0 Bifunctional purine biosynthesis protein PurH compare
MPMX20_01570 -5.5 -3.8 Integration host factor subunit beta compare
MPMX20_04531 -5.5 -11.1 Cystathionine gamma-synthase compare
MPMX20_00740 -5.5 -7.5 Carbamoyl-phosphate synthase large chain compare
MPMX20_03468 -5.4 -8.3 T-protein compare
MPMX20_04522 -5.4 -8.3 N-acetyl-gamma-glutamyl-phosphate reductase compare
MPMX20_02494 -5.4 -5.3 Orotidine 5'-phosphate decarboxylase compare
MPMX20_03004 -5.4 -11.4 Histidine biosynthesis bifunctional protein HisB compare
MPMX20_01097 -5.3 -8.2 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_03986 -5.3 -6.2 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_00711 -5.3 -14.1 Homoserine kinase compare
MPMX20_00712 -5.3 -12.8 Threonine synthase compare
MPMX20_01596 -5.3 -13.6 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_03007 -5.2 -8.7 Imidazole glycerol phosphate synthase subunit HisF compare
MPMX20_00710 -5.2 -17.4 Bifunctional aspartokinase/homoserine dehydrogenase 1 compare
MPMX20_00739 -5.2 -3.6 Carbamoyl-phosphate synthase small chain compare
MPMX20_01349 -5.1 -6.1 Citrate synthase compare
MPMX20_00093 -5.1 -5.0 Orotate phosphoribosyltransferase compare
MPMX20_04496 -5.1 -7.8 Ketol-acid reductoisomerase (NADP(+)) compare
MPMX20_04497 -5.1 -9.8 HTH-type transcriptional regulator GltC compare
MPMX20_03018 -5.0 -3.5 hypothetical protein compare
MPMX20_04552 -5.0 -6.0 ATP-dependent 6-phosphofructokinase isozyme 1 compare
MPMX20_04189 -5.0 -4.9 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_00976 -5.0 -3.4 Pyrroline-5-carboxylate reductase compare
MPMX20_03019 -5.0 -13.2 hypothetical protein compare
MPMX20_01567 -5.0 -5.9 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_03002 -4.9 -14.8 Histidinol dehydrogenase compare
MPMX20_01098 -4.9 -8.2 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_03852 -4.8 -16.1 Cystathionine beta-lyase MetC compare
MPMX20_03005 -4.8 -9.3 Imidazole glycerol phosphate synthase subunit HisH compare
MPMX20_00766 -4.8 -9.2 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_04278 -4.7 -3.3 3-dehydroquinate synthase compare
MPMX20_03008 -4.7 -9.9 Histidine biosynthesis bifunctional protein HisIE compare
MPMX20_04768 -4.7 -15.1 hypothetical protein compare
MPMX20_00556 -4.7 -12.6 Ornithine carbamoyltransferase subunit F compare
MPMX20_01741 -4.6 -7.0 Dihydroorotase compare
MPMX20_01367 -4.6 -9.8 Tol-Pal system protein TolR compare
MPMX20_03309 -4.6 -3.2 Phosphocarrier protein HPr compare
MPMX20_01369 -4.6 -13.1 Tol-Pal system protein TolB compare
MPMX20_00767 -4.6 -13.2 3-isopropylmalate dehydratase large subunit 1 compare
MPMX20_04521 -4.5 -9.7 Acetylglutamate kinase compare
MPMX20_04443 -4.5 -4.0 Sec-independent protein translocase protein TatB compare
MPMX20_04444 -4.5 -2.3 Sec-independent protein translocase protein TatA compare
MPMX20_03310 -4.5 -3.1 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_04162 -4.5 -5.3 3-dehydroquinate dehydratase compare
MPMX20_01549 -4.4 -3.1 ATP-binding/permease protein CydD compare
MPMX20_04524 -4.4 -19.3 Phosphoenolpyruvate carboxylase compare
MPMX20_01548 -4.4 -6.0 putative ABC transporter ATP-binding/permease protein compare
MPMX20_00768 -4.4 -16.2 3-isopropylmalate dehydrogenase compare
MPMX20_00241 -4.3 -12.8 Glucose-6-phosphate isomerase compare
MPMX20_04498 -4.3 -10.5 L-threonine dehydratase biosynthetic IlvA compare
MPMX20_04650 -4.2 -4.1 tRNA modification GTPase MnmE compare
MPMX20_01030 -4.2 -12.2 Lon protease compare
MPMX20_00106 -4.2 -2.9 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_00110 -4.1 -21.1 hypothetical protein compare
MPMX20_02514 -4.1 -6.9 Tryptophan synthase alpha chain compare
MPMX20_04626 -4.1 -2.8 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_00102 -4.0 -2.8 hypothetical protein compare
MPMX20_04440 -4.0 -2.7 Transcription antitermination protein RfaH compare
MPMX20_01028 -4.0 -2.7 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_03021 -4.0 -6.7 hypothetical protein compare
MPMX20_00109 -4.0 -24.5 hypothetical protein compare
MPMX20_01950 -4.0 -5.4 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_01362 -3.9 -7.0 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_04275 -3.9 -2.7 Ribulose-phosphate 3-epimerase compare
MPMX20_03022 -3.9 -2.7 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_01334 -3.9 -12.4 Phosphoglucomutase compare
MPMX20_03010 -3.9 -3.8 UDP-glucose 4-epimerase compare
MPMX20_04642 -3.7 -2.5 Phosphate import ATP-binding protein PstB compare
MPMX20_02574 -3.7 -4.3 putative intracellular septation protein A compare
MPMX20_03466 -3.6 -8.1 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX20_04595 -3.6 -2.5 Glutamine synthetase compare
MPMX20_03509 -3.5 -2.6 hypothetical protein compare
MPMX20_01354 -3.5 -5.3 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_03382 -3.5 -2.4 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_04483 -3.5 -4.1 Lipid III flippase compare
MPMX20_03683 -3.4 -2.3 RecBCD enzyme subunit RecB compare
MPMX20_01901 -3.3 -3.6 Integration host factor subunit alpha compare
MPMX20_02513 -3.3 -13.4 Tryptophan synthase beta chain compare
MPMX20_01286 -3.3 -2.5 Sec-independent protein translocase protein TatE compare
MPMX20_03013 -3.3 -12.8 dTDP-glucose 4,6-dehydratase compare
MPMX20_01029 -3.2 -5.2 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_03685 -3.2 -4.8 RecBCD enzyme subunit RecC compare
MPMX20_00105 -3.1 -14.2 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_03109 -3.1 -14.0 PTS system beta-glucoside-specific EIIBCA component conserved
MPMX20_04530 -3.1 -11.5 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_02591 -3.1 -7.7 DNA-binding protein H-NS compare
MPMX20_01370 -3.1 -5.4 Peptidoglycan-associated lipoprotein compare
MPMX20_01361 -3.1 -9.9 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_03110 -3.0 -13.9 Cryptic beta-glucoside bgl operon antiterminator conserved
MPMX20_01607 -3.0 -6.5 Outer membrane protein A compare
MPMX20_02476 -3.0 -3.9 Putrescine export system permease protein SapC compare
MPMX20_01969 -2.9 -5.4 Carbonic anhydrase 1 compare
MPMX20_04489 -2.8 -15.0 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_01551 -2.8 -7.2 Leucine-responsive regulatory protein compare
MPMX20_04119 -2.7 -3.2 DNA polymerase III subunit chi compare
MPMX20_03308 -2.7 -8.5 Cysteine synthase A compare
MPMX20_04279 -2.7 -3.5 Shikimate kinase 1 compare
MPMX20_03490 -2.7 -7.9 SsrA-binding protein compare
MPMX20_00108 -2.7 -18.6 hypothetical protein compare
MPMX20_01156 -2.6 -5.2 hypothetical protein compare
MPMX20_00899 -2.6 -2.5 Ribonuclease HI compare
MPMX20_04469 -2.6 -4.5 Adenylate cyclase compare
MPMX20_03020 -2.6 -9.7 hypothetical protein compare
MPMX20_01972 -2.6 -1.6 tRNA-Val compare
MPMX20_02511 -2.6 -13.8 Bifunctional protein TrpGD compare
MPMX20_01722 -2.6 -3.1 putative csgAB operon transcriptional regulatory protein compare
MPMX20_00453 -2.5 -2.0 RNA-binding protein Hfq compare
MPMX20_02512 -2.5 -11.6 Tryptophan biosynthesis protein TrpCF compare
MPMX20_02766 -2.5 -5.1 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_02475 -2.4 -6.6 Putrescine export system permease protein SapB compare
MPMX20_04641 -2.4 -3.9 Phosphate transport system permease protein PstA compare
MPMX20_00769 -2.4 -8.2 2-isopropylmalate synthase compare
MPMX20_02701 -2.3 -3.2 Fatty acid metabolism regulator protein compare
MPMX20_03705 -2.3 -11.0 Diaminopimelate decarboxylase compare
MPMX20_04276 -2.3 -7.4 DNA adenine methylase compare
MPMX20_02768 -2.3 -4.2 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_02510 -2.3 -11.4 Anthranilate synthase component 1 compare
MPMX20_00807 -2.3 -4.0 Pyruvate dehydrogenase E1 component compare
MPMX20_03017 -2.3 -10.5 hypothetical protein compare
MPMX20_03226 -2.3 -5.1 Acetate kinase compare
MPMX20_03407 -2.2 -5.0 Chaperone protein HscA compare
MPMX20_00745 -2.2 -6.4 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_04532 -2.2 -3.7 Met repressor compare
MPMX20_04557 -2.2 -8.4 Sensor histidine kinase CpxA compare
MPMX20_03047 -2.2 -6.3 dCTP deaminase compare
MPMX20_04262 -2.2 -9.6 Acetylornithine/succinyldiaminopimelate aminotransferase compare
MPMX20_04197 -2.1 -6.7 Trk system potassium uptake protein TrkA compare
MPMX20_04110 -2.1 -6.8 Nitrogen regulatory protein compare
MPMX20_04467 -2.1 -9.6 Diaminopimelate epimerase compare
MPMX20_00812 -2.1 -8.3 Aconitate hydratase B compare
MPMX20_01355 -2.1 -1.7 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_00721 -2.1 -3.9 Chaperone protein DnaJ compare
MPMX20_00086 -2.0 -3.6 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_03012 -2.0 -11.0 Glucose-1-phosphate thymidylyltransferase 1 compare
MPMX20_04465 -2.0 -6.7 Tyrosine recombinase XerC compare
MPMX20_03267 -2.0 -3.7 Phosphohistidine phosphatase SixA compare
MPMX20_04133 -2.0 -4.6 Stringent starvation protein A compare
MPMX20_01394 -2.0 -9.0 6-phosphogluconolactonase compare
MPMX20_03641 -2.0 -7.0 Phosphoadenosine phosphosulfate reductase compare
MPMX20_02593 -2.0 -14.1 Regulator of RpoS compare
MPMX20_04140 -2.0 -8.7 Malate dehydrogenase compare
MPMX20_03923 -1.9 -3.4 hypothetical protein compare
MPMX20_03108 -1.9 -15.6 6-phospho-beta-glucosidase BglB compare
MPMX20_03469 -1.9 -8.2 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive compare
MPMX20_00747 -1.9 -6.0 Ribosomal RNA small subunit methyltransferase A compare
MPMX20_04529 -1.9 -6.9 5,10-methylenetetrahydrofolate reductase compare
MPMX20_01552 -1.9 -5.2 hypothetical protein compare
MPMX20_00708 -1.9 -6.1 Aerobic respiration control protein ArcA compare
MPMX20_04668 -1.8 -3.5 hypothetical protein compare
MPMX20_03753 -1.8 -6.6 Tyrosine recombinase XerD compare
MPMX20_02478 -1.8 -7.7 Putrescine export system ATP-binding protein SapF compare
MPMX20_03248 -1.8 -2.8 Colicin V production protein compare
MPMX20_04393 -1.8 -6.2 Low-affinity inorganic phosphate transporter 1 compare
MPMX20_03591 -1.8 -8.8 Glucitol operon repressor compare
MPMX20_00087 -1.8 -3.0 DNA-directed RNA polymerase subunit omega compare
MPMX20_03408 -1.8 -1.6 Co-chaperone protein HscB compare
MPMX20_03390 -1.8 -7.1 Outer membrane protein assembly factor BamB compare
MPMX20_00720 -1.8 -1.3 Chaperone protein DnaK compare
MPMX20_00773 -1.7 -9.7 Catabolite repressor/activator compare
MPMX20_00514 -1.7 -7.3 Fructose-1,6-bisphosphatase class 1 compare
MPMX20_00728 -1.7 -1.5 FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase compare
MPMX20_00197 -1.7 -2.5 tRNA-Tyr compare
MPMX20_00537 -1.7 -10.2 Trehalose-6-phosphate hydrolase compare
MPMX20_03209 -1.7 -2.8 NADH-quinone oxidoreductase subunit K compare
MPMX20_01382 -1.7 -3.0 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
MPMX20_01586 -1.7 -8.2 Aspartate aminotransferase compare
MPMX20_04463 -1.6 -5.5 DNA helicase II compare
MPMX20_03154 -1.6 -8.3 Inner membrane protein YejM compare
MPMX20_03706 -1.6 -6.9 Octopine catabolism/uptake operon regulatory protein OccR compare
MPMX20_03643 -1.6 -7.0 Sulfite reductase [NADPH] flavoprotein alpha-component compare
MPMX20_03218 -1.6 -4.0 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_03217 -1.6 -5.5 NADH-quinone oxidoreductase subunit B compare
MPMX20_03642 -1.5 -6.1 Sulfite reductase [NADPH] hemoprotein beta-component compare
MPMX20_00998 -1.5 -3.1 Sec translocon accessory complex subunit YajC compare


Specific Phenotypes

For 3 genes in this experiment

For carbon source D-Salicin in Enterobacter sp. TBS_079

For carbon source D-Salicin across organisms