Experiment set9S373 for Enterobacter sp. TBS_079

Compare to:

Inosine carbon source

200 most important genes:

  gene name fitness t score description  
MPMX20_02514 -6.5 -4.5 Tryptophan synthase alpha chain compare
MPMX20_04077 -6.3 -6.1 Argininosuccinate synthase compare
MPMX20_01566 -6.1 -14.8 Phosphoserine aminotransferase compare
MPMX20_03771 -6.1 -12.4 D-3-phosphoglycerate dehydrogenase compare
MPMX20_03264 -6.1 -4.2 Chorismate synthase compare
MPMX20_01366 -6.0 -5.8 Tol-Pal system protein TolQ compare
MPMX20_00928 -5.9 -11.4 Gamma-glutamyl phosphate reductase compare
MPMX20_00544 -5.7 -6.8 Aspartate carbamoyltransferase catalytic subunit compare
MPMX20_04521 -5.7 -6.8 Acetylglutamate kinase compare
MPMX20_04520 -5.7 -7.8 Argininosuccinate lyase compare
MPMX20_01354 -5.7 -3.9 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_03681 -5.6 -15.0 Amino-acid acetyltransferase compare
MPMX20_00693 -5.6 -12.0 Phosphoserine phosphatase compare
MPMX20_00927 -5.6 -15.3 Glutamate 5-kinase compare
MPMX20_04162 -5.4 -3.7 3-dehydroquinate dehydratase compare
MPMX20_00711 -5.4 -13.5 Homoserine kinase compare
MPMX20_00682 -5.4 -8.2 Phosphopentomutase conserved
MPMX20_01370 -5.2 -6.1 Peptidoglycan-associated lipoprotein compare
MPMX20_01596 -5.2 -17.7 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_04442 -5.1 -7.0 Sec-independent protein translocase protein TatC compare
MPMX20_00740 -5.1 -9.8 Carbamoyl-phosphate synthase large chain compare
MPMX20_03209 -5.1 -4.9 NADH-quinone oxidoreductase subunit K compare
MPMX20_03018 -5.1 -3.5 hypothetical protein compare
MPMX20_03007 -5.0 -9.5 Imidazole glycerol phosphate synthase subunit HisF compare
MPMX20_01567 -5.0 -6.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_03004 -5.0 -12.4 Histidine biosynthesis bifunctional protein HisB compare
MPMX20_03006 -4.9 -11.0 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX20_00712 -4.9 -13.4 Threonine synthase compare
MPMX20_04522 -4.9 -8.2 N-acetyl-gamma-glutamyl-phosphate reductase compare
MPMX20_01349 -4.9 -6.7 Citrate synthase compare
MPMX20_04499 -4.9 -15.9 Dihydroxy-acid dehydratase compare
MPMX20_01741 -4.9 -5.8 Dihydroorotase compare
MPMX20_00230 -4.8 -9.7 Homoserine O-succinyltransferase compare
MPMX20_00683 -4.7 -11.4 Purine nucleoside phosphorylase DeoD-type conserved
MPMX20_00831 -4.7 -8.0 RNA polymerase-binding transcription factor DksA compare
MPMX20_04523 -4.7 -9.6 Acetylornithine deacetylase compare
MPMX20_02494 -4.7 -9.5 Orotidine 5'-phosphate decarboxylase compare
MPMX20_01369 -4.6 -12.3 Tol-Pal system protein TolB compare
MPMX20_03003 -4.6 -13.3 Histidinol-phosphate aminotransferase compare
MPMX20_00976 -4.6 -4.5 Pyrroline-5-carboxylate reductase compare
MPMX20_02591 -4.6 -7.7 DNA-binding protein H-NS compare
MPMX20_03001 -4.6 -15.0 ATP phosphoribosyltransferase compare
MPMX20_01901 -4.6 -3.1 Integration host factor subunit alpha compare
MPMX20_03019 -4.6 -17.4 hypothetical protein compare
MPMX20_01368 -4.6 -6.9 hypothetical protein compare
MPMX20_03468 -4.5 -10.7 T-protein compare
MPMX20_00556 -4.4 -12.1 Ornithine carbamoyltransferase subunit F compare
MPMX20_00093 -4.4 -8.5 Orotate phosphoribosyltransferase compare
MPMX20_04531 -4.4 -13.4 Cystathionine gamma-synthase compare
MPMX20_01549 -4.4 -4.2 ATP-binding/permease protein CydD compare
MPMX20_04524 -4.3 -18.4 Phosphoenolpyruvate carboxylase compare
MPMX20_01950 -4.3 -5.9 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_00739 -4.1 -7.8 Carbamoyl-phosphate synthase small chain compare
MPMX20_04650 -4.1 -4.0 tRNA modification GTPase MnmE compare
MPMX20_00106 -4.0 -2.8 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_03212 -4.0 -7.6 NADH-quinone oxidoreductase subunit H compare
MPMX20_01367 -4.0 -9.5 Tol-Pal system protein TolR compare
MPMX20_00710 -3.9 -15.2 Bifunctional aspartokinase/homoserine dehydrogenase 1 compare
MPMX20_01028 -3.9 -2.7 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_03022 -3.9 -2.7 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_04440 -3.9 -2.7 Transcription antitermination protein RfaH compare
MPMX20_00102 -3.9 -2.7 hypothetical protein compare
MPMX20_03002 -3.9 -14.6 Histidinol dehydrogenase compare
MPMX20_03008 -3.9 -8.6 Histidine biosynthesis bifunctional protein HisIE compare
MPMX20_04189 -3.9 -7.4 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_04275 -3.8 -2.6 Ribulose-phosphate 3-epimerase compare
MPMX20_01030 -3.8 -12.0 Lon protease compare
MPMX20_04483 -3.8 -2.6 Lipid III flippase compare
MPMX20_04768 -3.8 -8.9 hypothetical protein compare
MPMX20_01029 -3.8 -4.5 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_00110 -3.7 -21.1 hypothetical protein compare
MPMX20_02766 -3.7 -5.1 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_00768 -3.7 -14.8 3-isopropylmalate dehydrogenase compare
MPMX20_02574 -3.7 -4.4 putative intracellular septation protein A compare
MPMX20_04496 -3.7 -10.4 Ketol-acid reductoisomerase (NADP(+)) compare
MPMX20_00109 -3.7 -22.7 hypothetical protein compare
MPMX20_04278 -3.7 -6.1 3-dehydroquinate synthase compare
MPMX20_03021 -3.7 -9.4 hypothetical protein compare
MPMX20_03010 -3.6 -6.0 UDP-glucose 4-epimerase compare
MPMX20_04626 -3.6 -4.2 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_04443 -3.6 -4.1 Sec-independent protein translocase protein TatB compare
MPMX20_01355 -3.6 -2.0 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_04497 -3.6 -9.1 HTH-type transcriptional regulator GltC compare
MPMX20_00773 -3.5 -14.3 Catabolite repressor/activator compare
MPMX20_00766 -3.5 -8.6 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_04595 -3.5 -2.4 Glutamine synthetase compare
MPMX20_03466 -3.5 -10.0 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX20_04469 -3.5 -5.3 Adenylate cyclase compare
MPMX20_01334 -3.4 -11.4 Phosphoglucomutase compare
MPMX20_03683 -3.4 -2.3 RecBCD enzyme subunit RecB compare
MPMX20_04498 -3.4 -9.6 L-threonine dehydratase biosynthetic IlvA compare
MPMX20_03382 -3.3 -2.3 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_00721 -3.3 -4.5 Chaperone protein DnaJ compare
MPMX20_04552 -3.3 -7.4 ATP-dependent 6-phosphofructokinase isozyme 1 compare
MPMX20_00767 -3.2 -12.2 3-isopropylmalate dehydratase large subunit 1 compare
MPMX20_02512 -3.2 -12.9 Tryptophan biosynthesis protein TrpCF compare
MPMX20_02511 -3.2 -12.6 Bifunctional protein TrpGD compare
MPMX20_01607 -3.2 -6.7 Outer membrane protein A compare
MPMX20_03013 -3.1 -13.6 dTDP-glucose 4,6-dehydratase compare
MPMX20_04489 -3.1 -18.2 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_03685 -3.1 -5.1 RecBCD enzyme subunit RecC compare
MPMX20_00745 -3.1 -6.2 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_03308 -3.0 -8.8 Cysteine synthase A compare
MPMX20_04279 -3.0 -4.1 Shikimate kinase 1 compare
MPMX20_03852 -3.0 -14.0 Cystathionine beta-lyase MetC compare
MPMX20_03986 -2.9 -4.0 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_02513 -2.9 -11.8 Tryptophan synthase beta chain compare
MPMX20_00105 -2.9 -14.7 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_03215 -2.9 -5.0 NADH-quinone oxidoreductase subunit E compare
MPMX20_03214 -2.9 -10.6 NADH-quinone oxidoreductase subunit F compare
MPMX20_01548 -2.8 -6.1 putative ABC transporter ATP-binding/permease protein compare
MPMX20_04197 -2.8 -7.0 Trk system potassium uptake protein TrkA compare
MPMX20_03020 -2.8 -9.1 hypothetical protein compare
MPMX20_01552 -2.8 -4.9 hypothetical protein compare
MPMX20_02593 -2.7 -18.0 Regulator of RpoS compare
MPMX20_04140 -2.7 -10.6 Malate dehydrogenase compare
MPMX20_00453 -2.7 -2.9 RNA-binding protein Hfq compare
MPMX20_01977 -2.7 -9.7 putative HTH-type transcriptional regulator YahB compare
MPMX20_01976 -2.7 -11.3 Inner membrane transport protein YdhC conserved
MPMX20_02672 -2.7 -19.5 hypothetical protein compare
MPMX20_00241 -2.7 -12.3 Glucose-6-phosphate isomerase compare
MPMX20_03705 -2.7 -9.4 Diaminopimelate decarboxylase compare
MPMX20_03287 -2.7 -11.5 Nucleoside permease NupC conserved
MPMX20_04532 -2.6 -3.7 Met repressor compare
MPMX20_04119 -2.6 -3.0 DNA polymerase III subunit chi compare
MPMX20_04642 -2.6 -3.0 Phosphate import ATP-binding protein PstB compare
MPMX20_03742 -2.5 -10.6 HTH-type transcriptional regulator GalR compare
MPMX20_03017 -2.5 -11.8 hypothetical protein compare
MPMX20_02476 -2.5 -3.5 Putrescine export system permease protein SapC compare
MPMX20_01570 -2.5 -3.1 Integration host factor subunit beta compare
MPMX20_03012 -2.5 -13.4 Glucose-1-phosphate thymidylyltransferase 1 compare
MPMX20_03213 -2.5 -9.4 NADH-quinone oxidoreductase subunit G compare
MPMX20_03208 -2.5 -8.2 NADH-quinone oxidoreductase subunit L compare
MPMX20_00807 -2.5 -3.7 Pyruvate dehydrogenase E1 component compare
MPMX20_03207 -2.5 -8.5 NADH-quinone oxidoreductase subunit M compare
MPMX20_02768 -2.4 -3.9 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_04530 -2.4 -10.4 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_03218 -2.4 -4.3 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_02510 -2.4 -11.3 Anthranilate synthase component 1 compare
MPMX20_00769 -2.4 -11.4 2-isopropylmalate synthase compare
MPMX20_02063 -2.3 -10.8 Protein mlc compare
MPMX20_03591 -2.3 -7.5 Glucitol operon repressor compare
MPMX20_00108 -2.3 -14.6 hypothetical protein compare
MPMX20_03216 -2.3 -11.4 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_03206 -2.3 -9.7 NADH-quinone oxidoreductase subunit N compare
MPMX20_01322 -2.3 -10.3 N-acetylglucosamine repressor compare
MPMX20_01362 -2.2 -7.0 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_02767 -2.2 -3.2 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_01361 -2.2 -8.3 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_00829 -2.2 -8.1 Poly(A) polymerase I compare
MPMX20_02475 -2.2 -6.3 Putrescine export system permease protein SapB compare
MPMX20_03210 -2.2 -5.9 NADH-quinone oxidoreductase subunit J compare
MPMX20_03310 -2.2 -6.3 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_04306 -2.2 -6.9 Glycerol-3-phosphate regulon repressor compare
MPMX20_02701 -2.2 -3.4 Fatty acid metabolism regulator protein compare
MPMX20_00086 -2.1 -4.1 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_00747 -2.1 -5.0 Ribosomal RNA small subunit methyltransferase A compare
MPMX20_03267 -2.1 -3.8 Phosphohistidine phosphatase SixA compare
MPMX20_03490 -2.0 -5.5 SsrA-binding protein compare
MPMX20_02997 -2.0 -9.4 Exodeoxyribonuclease I compare
MPMX20_03090 -2.0 -1.9 Methionine--tRNA ligase compare
MPMX20_00998 -2.0 -3.7 Sec translocon accessory complex subunit YajC compare
MPMX20_03217 -1.9 -5.5 NADH-quinone oxidoreductase subunit B compare
MPMX20_02203 -1.9 -2.5 hypothetical protein compare
MPMX20_03923 -1.9 -4.1 hypothetical protein compare
MPMX20_03015 -1.9 -14.9 Phosphoglucosamine mutase compare
MPMX20_04529 -1.9 -5.3 5,10-methylenetetrahydrofolate reductase compare
MPMX20_04141 -1.9 -6.9 Arginine repressor compare
MPMX20_04484 -1.9 -8.9 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
MPMX20_03233 -1.9 -11.2 HTH-type transcriptional regulator GntR compare
MPMX20_03154 -1.9 -8.9 Inner membrane protein YejM compare
MPMX20_03016 -1.9 -14.5 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_02204 -1.9 -6.5 hypothetical protein compare
MPMX20_02477 -1.9 -4.6 Peptide transport system ATP-binding protein SapD compare
MPMX20_02770 -1.8 -5.8 Dihydroneopterin triphosphate diphosphatase compare
MPMX20_04601 -1.8 -2.7 DNA polymerase I compare
MPMX20_03211 -1.8 -3.4 NADH-quinone oxidoreductase subunit I compare
MPMX20_03132 -1.8 -7.6 Tagatose-6-phosphate kinase compare
MPMX20_04110 -1.8 -5.5 Nitrogen regulatory protein compare
MPMX20_04444 -1.7 -2.2 Sec-independent protein translocase protein TatA compare
MPMX20_01352 -1.7 -8.2 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_04465 -1.7 -5.7 Tyrosine recombinase XerC compare
MPMX20_01156 -1.7 -3.6 hypothetical protein compare
MPMX20_04038 -1.6 -5.1 Glucitol operon repressor compare
MPMX20_01734 -1.6 -8.5 Lipid A biosynthesis lauroyltransferase compare
MPMX20_04463 -1.6 -6.2 DNA helicase II compare
MPMX20_00720 -1.6 -1.4 Chaperone protein DnaK compare
MPMX20_04194 -1.5 -2.4 Peptide deformylase compare
MPMX20_04482 -1.5 -7.8 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase compare
MPMX20_00197 -1.5 -2.0 tRNA-Tyr compare
MPMX20_04585 -1.5 -4.9 HTH-type transcriptional repressor CsqR compare
MPMX20_04670 -1.5 -1.8 hypothetical protein compare
MPMX20_02478 -1.5 -6.8 Putrescine export system ATP-binding protein SapF compare
MPMX20_03641 -1.5 -6.3 Phosphoadenosine phosphosulfate reductase compare
MPMX20_01382 -1.5 -3.0 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
MPMX20_03390 -1.4 -5.6 Outer membrane protein assembly factor BamB compare
MPMX20_01353 -1.4 -4.2 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_02696 -1.4 -6.3 Murein tetrapeptide carboxypeptidase compare
MPMX20_04466 -1.4 -3.9 hypothetical protein compare
MPMX20_02102 -1.4 -2.2 hypothetical protein compare


Specific Phenotypes

For 6 genes in this experiment

For carbon source Inosine in Enterobacter sp. TBS_079

For carbon source Inosine across organisms