Experiment set9S372 for Enterobacter sp. TBS_079

Compare to:

Thymidine carbon source

200 most important genes:

  gene name fitness t score description  
MPMX20_01566 -7.2 -8.6 Phosphoserine aminotransferase compare
MPMX20_00831 -6.8 -4.7 RNA polymerase-binding transcription factor DksA compare
MPMX20_03354 -6.7 -9.2 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_01370 -6.6 -6.4 Peptidoglycan-associated lipoprotein compare
MPMX20_01098 -6.3 -4.4 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_00693 -6.3 -8.6 Phosphoserine phosphatase compare
MPMX20_03338 -6.2 -4.3 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_03468 -6.2 -4.3 T-protein compare
MPMX20_00927 -6.1 -14.7 Glutamate 5-kinase compare
MPMX20_04077 -5.8 -9.7 Argininosuccinate synthase compare
MPMX20_03771 -5.8 -13.4 D-3-phosphoglycerate dehydrogenase compare
MPMX20_03006 -5.8 -8.8 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX20_03681 -5.7 -14.4 Amino-acid acetyltransferase compare
MPMX20_03426 -5.6 -14.9 Phosphoribosylformylglycinamidine synthase compare
MPMX20_04499 -5.6 -13.4 Dihydroxy-acid dehydratase compare
MPMX20_04520 -5.5 -7.6 Argininosuccinate lyase compare
MPMX20_01097 -5.5 -6.6 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_00226 -5.5 -7.5 Bifunctional purine biosynthesis protein PurH compare
MPMX20_04523 -5.4 -9.0 Acetylornithine deacetylase compare
MPMX20_00711 -5.4 -12.6 Homoserine kinase compare
MPMX20_00928 -5.3 -11.9 Gamma-glutamyl phosphate reductase compare
MPMX20_00740 -5.3 -8.8 Carbamoyl-phosphate synthase large chain compare
MPMX20_04531 -5.3 -10.7 Cystathionine gamma-synthase compare
MPMX20_03004 -5.2 -11.2 Histidine biosynthesis bifunctional protein HisB compare
MPMX20_00680 -5.2 -8.0 Deoxyribose-phosphate aldolase compare
MPMX20_03247 -5.2 -10.5 Amidophosphoribosyltransferase compare
MPMX20_02494 -5.2 -7.9 Orotidine 5'-phosphate decarboxylase compare
MPMX20_01567 -5.1 -5.0 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_00681 -5.1 -11.8 Thymidine phosphorylase compare
MPMX20_01596 -5.0 -18.1 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_01349 -5.0 -6.0 Citrate synthase compare
MPMX20_01355 -5.0 -2.1 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_02514 -5.0 -7.6 Tryptophan synthase alpha chain compare
MPMX20_03001 -5.0 -13.7 ATP phosphoribosyltransferase compare
MPMX20_01367 -5.0 -7.6 Tol-Pal system protein TolR compare
MPMX20_03007 -5.0 -8.9 Imidazole glycerol phosphate synthase subunit HisF compare
MPMX20_01030 -4.9 -8.3 Lon protease compare
MPMX20_00225 -4.9 -12.4 Phosphoribosylamine--glycine ligase compare
MPMX20_00544 -4.9 -8.2 Aspartate carbamoyltransferase catalytic subunit compare
MPMX20_02591 -4.9 -7.4 DNA-binding protein H-NS compare
MPMX20_04521 -4.8 -8.7 Acetylglutamate kinase compare
MPMX20_01369 -4.8 -11.6 Tol-Pal system protein TolB compare
MPMX20_04496 -4.8 -6.6 Ketol-acid reductoisomerase (NADP(+)) compare
MPMX20_04522 -4.8 -8.6 N-acetyl-gamma-glutamyl-phosphate reductase compare
MPMX20_00093 -4.8 -5.7 Orotate phosphoribosyltransferase compare
MPMX20_00514 -4.8 -4.6 Fructose-1,6-bisphosphatase class 1 compare
MPMX20_00710 -4.8 -17.5 Bifunctional aspartokinase/homoserine dehydrogenase 1 compare
MPMX20_00682 -4.7 -10.5 Phosphopentomutase compare
MPMX20_01548 -4.7 -4.6 putative ABC transporter ATP-binding/permease protein compare
MPMX20_04189 -4.7 -4.6 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_03019 -4.7 -16.5 hypothetical protein compare
MPMX20_01570 -4.6 -4.5 Integration host factor subunit beta compare
MPMX20_00712 -4.6 -14.4 Threonine synthase compare
MPMX20_01368 -4.6 -6.9 hypothetical protein compare
MPMX20_00739 -4.6 -5.4 Carbamoyl-phosphate synthase small chain compare
MPMX20_03003 -4.6 -13.1 Histidinol-phosphate aminotransferase compare
MPMX20_04524 -4.6 -17.2 Phosphoenolpyruvate carboxylase compare
MPMX20_01901 -4.5 -3.1 Integration host factor subunit alpha compare
MPMX20_03264 -4.5 -7.5 Chorismate synthase compare
MPMX20_04442 -4.5 -8.1 Sec-independent protein translocase protein TatC compare
MPMX20_01741 -4.5 -6.1 Dihydroorotase compare
MPMX20_04278 -4.4 -3.1 3-dehydroquinate synthase compare
MPMX20_03018 -4.4 -6.0 hypothetical protein compare
MPMX20_01366 -4.3 -8.2 Tol-Pal system protein TolQ compare
MPMX20_03002 -4.3 -14.5 Histidinol dehydrogenase compare
MPMX20_04498 -4.2 -12.2 L-threonine dehydratase biosynthetic IlvA compare
MPMX20_01549 -4.2 -4.1 ATP-binding/permease protein CydD compare
MPMX20_00230 -4.2 -9.4 Homoserine O-succinyltransferase compare
MPMX20_01362 -4.1 -6.3 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_00767 -4.1 -11.8 3-isopropylmalate dehydratase large subunit 1 compare
MPMX20_04162 -4.1 -5.6 3-dehydroquinate dehydratase compare
MPMX20_04443 -4.0 -4.5 Sec-independent protein translocase protein TatB compare
MPMX20_03005 -4.0 -10.2 Imidazole glycerol phosphate synthase subunit HisH compare
MPMX20_00106 -4.0 -2.8 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_03212 -4.0 -7.1 NADH-quinone oxidoreductase subunit H compare
MPMX20_00110 -3.9 -20.0 hypothetical protein compare
MPMX20_03022 -3.9 -2.7 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_00773 -3.9 -15.6 Catabolite repressor/activator compare
MPMX20_01028 -3.9 -2.7 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_03008 -3.9 -7.1 Histidine biosynthesis bifunctional protein HisIE compare
MPMX20_04469 -3.9 -4.6 Adenylate cyclase compare
MPMX20_03010 -3.8 -4.6 UDP-glucose 4-epimerase compare
MPMX20_01950 -3.8 -5.7 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_02344 -3.8 -2.8 hypothetical protein compare
MPMX20_03208 -3.7 -8.9 NADH-quinone oxidoreductase subunit L compare
MPMX20_00768 -3.7 -15.4 3-isopropylmalate dehydrogenase compare
MPMX20_00556 -3.6 -10.7 Ornithine carbamoyltransferase subunit F compare
MPMX20_01029 -3.6 -4.2 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_04768 -3.5 -12.2 hypothetical protein compare
MPMX20_02512 -3.5 -12.1 Tryptophan biosynthesis protein TrpCF compare
MPMX20_03207 -3.5 -8.1 NADH-quinone oxidoreductase subunit M compare
MPMX20_00109 -3.5 -22.8 hypothetical protein compare
MPMX20_04483 -3.5 -3.4 Lipid III flippase compare
MPMX20_03218 -3.5 -6.1 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_04595 -3.5 -2.4 Glutamine synthetase compare
MPMX20_04497 -3.5 -10.3 HTH-type transcriptional regulator GltC compare
MPMX20_00721 -3.4 -4.0 Chaperone protein DnaJ compare
MPMX20_03021 -3.4 -9.3 hypothetical protein compare
MPMX20_03685 -3.4 -2.3 RecBCD enzyme subunit RecC compare
MPMX20_01156 -3.4 -6.1 hypothetical protein compare
MPMX20_03013 -3.4 -13.0 dTDP-glucose 4,6-dehydratase compare
MPMX20_00766 -3.4 -8.9 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_03213 -3.4 -12.6 NADH-quinone oxidoreductase subunit G compare
MPMX20_00241 -3.3 -12.3 Glucose-6-phosphate isomerase compare
MPMX20_04140 -3.3 -11.0 Malate dehydrogenase compare
MPMX20_01607 -3.3 -6.6 Outer membrane protein A compare
MPMX20_02476 -3.3 -3.8 Putrescine export system permease protein SapC compare
MPMX20_01354 -3.3 -3.5 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_03382 -3.3 -2.2 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_03466 -3.2 -9.4 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX20_02513 -3.2 -11.6 Tryptophan synthase beta chain compare
MPMX20_03683 -3.2 -3.1 RecBCD enzyme subunit RecB compare
MPMX20_00976 -3.2 -5.3 Pyrroline-5-carboxylate reductase compare
MPMX20_04626 -3.2 -4.8 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_01334 -3.2 -10.9 Phosphoglucomutase compare
MPMX20_03206 -3.2 -11.2 NADH-quinone oxidoreductase subunit N compare
MPMX20_03217 -3.2 -7.2 NADH-quinone oxidoreductase subunit B compare
MPMX20_00453 -3.2 -3.0 RNA-binding protein Hfq compare
MPMX20_00745 -3.2 -6.8 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_02574 -3.1 -4.7 putative intracellular septation protein A compare
MPMX20_03211 -3.1 -5.9 NADH-quinone oxidoreductase subunit I compare
MPMX20_02511 -3.1 -13.9 Bifunctional protein TrpGD compare
MPMX20_04532 -3.1 -4.7 Met repressor compare
MPMX20_00899 -3.1 -2.1 Ribonuclease HI compare
MPMX20_00102 -3.1 -4.2 hypothetical protein compare
MPMX20_04489 -3.1 -17.9 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_04642 -3.0 -2.9 Phosphate import ATP-binding protein PstB compare
MPMX20_02593 -3.0 -19.1 Regulator of RpoS compare
MPMX20_03821 -3.0 -12.9 Nucleoside permease NupG compare
MPMX20_03210 -2.9 -7.7 NADH-quinone oxidoreductase subunit J compare
MPMX20_02997 -2.9 -11.9 Exodeoxyribonuclease I compare
MPMX20_00105 -2.9 -13.2 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_03215 -2.9 -4.9 NADH-quinone oxidoreductase subunit E compare
MPMX20_04197 -2.8 -6.7 Trk system potassium uptake protein TrkA compare
MPMX20_03509 -2.8 -2.7 hypothetical protein compare
MPMX20_02701 -2.8 -3.7 Fatty acid metabolism regulator protein compare
MPMX20_03020 -2.8 -10.1 hypothetical protein compare
MPMX20_04650 -2.8 -5.0 tRNA modification GTPase MnmE compare
MPMX20_03214 -2.7 -10.5 NADH-quinone oxidoreductase subunit F compare
MPMX20_04119 -2.7 -3.2 DNA polymerase III subunit chi compare
MPMX20_01361 -2.7 -9.1 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_03986 -2.7 -5.1 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_02477 -2.7 -4.7 Peptide transport system ATP-binding protein SapD compare
MPMX20_02672 -2.7 -20.1 hypothetical protein compare
MPMX20_03310 -2.7 -6.5 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_00108 -2.6 -16.8 hypothetical protein compare
MPMX20_04530 -2.6 -8.9 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_03591 -2.6 -9.3 Glucitol operon repressor compare
MPMX20_03216 -2.6 -11.9 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_01552 -2.5 -4.8 hypothetical protein compare
MPMX20_01005 -2.5 -4.7 Transcriptional repressor NrdR compare
MPMX20_02510 -2.5 -13.2 Anthranilate synthase component 1 compare
MPMX20_00769 -2.5 -9.7 2-isopropylmalate synthase compare
MPMX20_03852 -2.4 -13.6 Cystathionine beta-lyase MetC compare
MPMX20_04640 -2.4 -3.9 Phosphate transport system permease protein PstC compare
MPMX20_03267 -2.4 -3.6 Phosphohistidine phosphatase SixA compare
MPMX20_03705 -2.4 -9.8 Diaminopimelate decarboxylase compare
MPMX20_02766 -2.3 -3.9 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_03308 -2.3 -8.0 Cysteine synthase A compare
MPMX20_03012 -2.3 -12.5 Glucose-1-phosphate thymidylyltransferase 1 compare
MPMX20_02768 -2.3 -3.4 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_03742 -2.3 -8.3 HTH-type transcriptional regulator GalR compare
MPMX20_00197 -2.2 -1.4 tRNA-Tyr compare
MPMX20_03407 -2.2 -4.5 Chaperone protein HscA compare
MPMX20_00807 -2.2 -4.0 Pyruvate dehydrogenase E1 component compare
MPMX20_00998 -2.2 -4.0 Sec translocon accessory complex subunit YajC compare
MPMX20_03469 -2.1 -7.4 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive compare
MPMX20_02478 -2.1 -7.8 Putrescine export system ATP-binding protein SapF compare
MPMX20_02475 -2.0 -5.9 Putrescine export system permease protein SapB compare
MPMX20_02063 -2.0 -9.1 Protein mlc compare
MPMX20_01942 -2.0 -7.6 HTH-type transcriptional repressor BluR compare
MPMX20_03017 -1.9 -8.3 hypothetical protein compare
MPMX20_00452 -1.9 -7.7 tRNA dimethylallyltransferase compare
MPMX20_04141 -1.9 -7.4 Arginine repressor compare
MPMX20_04038 -1.9 -5.4 Glucitol operon repressor compare
MPMX20_01351 -1.9 -4.0 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_03209 -1.9 -2.3 NADH-quinone oxidoreductase subunit K compare
MPMX20_04110 -1.9 -5.0 Nitrogen regulatory protein compare
MPMX20_04465 -1.8 -6.1 Tyrosine recombinase XerC compare
MPMX20_03015 -1.8 -14.5 Phosphoglucosamine mutase compare
MPMX20_01353 -1.8 -5.8 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_01356 -1.8 -8.6 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_01352 -1.7 -7.6 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_04444 -1.7 -2.5 Sec-independent protein translocase protein TatA compare
MPMX20_03016 -1.7 -12.7 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_00086 -1.7 -2.9 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_03408 -1.7 -2.3 Co-chaperone protein HscB compare
MPMX20_03233 -1.6 -10.6 HTH-type transcriptional regulator GntR compare
MPMX20_03154 -1.6 -6.8 Inner membrane protein YejM compare
MPMX20_01768 -1.6 -2.7 Large ribosomal RNA subunit accumulation protein YceD compare
MPMX20_02826 -1.6 -2.5 Cold shock-like protein CspB compare
MPMX20_01382 -1.6 -2.9 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
MPMX20_03490 -1.6 -5.5 SsrA-binding protein compare
MPMX20_02307 -1.6 -3.7 hypothetical protein compare
MPMX20_01550 -1.6 -2.3 Thioredoxin reductase compare
MPMX20_04484 -1.6 -8.4 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
MPMX20_03390 -1.6 -7.1 Outer membrane protein assembly factor BamB compare
MPMX20_00812 -1.5 -6.7 Aconitate hydratase B compare
MPMX20_00570 -1.5 -10.2 putative BsuMI modification methylase subunit YdiO compare
MPMX20_04647 -1.5 -4.9 hypothetical protein compare


Specific Phenotypes

For 4 genes in this experiment

For carbon source Thymidine in Enterobacter sp. TBS_079

For carbon source Thymidine across organisms