Experiment set9S371 for Enterobacter sp. TBS_079

Compare to:

Uridine carbon source

200 most important genes:

  gene name fitness t score description  
MPMX20_01566 -5.1 -7.8 Phosphoserine aminotransferase compare
MPMX20_03354 -5.0 -6.8 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_00831 -4.9 -3.4 RNA polymerase-binding transcription factor DksA compare
MPMX20_00693 -4.8 -4.7 Phosphoserine phosphatase compare
MPMX20_03986 -4.6 -4.5 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_03247 -4.4 -3.1 Amidophosphoribosyltransferase compare
MPMX20_03338 -4.3 -3.0 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_03771 -4.3 -9.2 D-3-phosphoglycerate dehydrogenase compare
MPMX20_04499 -4.3 -7.2 Dihydroxy-acid dehydratase compare
MPMX20_00225 -4.2 -5.7 Phosphoribosylamine--glycine ligase compare
MPMX20_04520 -4.1 -2.9 Argininosuccinate lyase compare
MPMX20_04077 -4.1 -5.7 Argininosuccinate synthase compare
MPMX20_01098 -4.1 -4.0 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_00928 -4.0 -7.3 Gamma-glutamyl phosphate reductase compare
MPMX20_01370 -4.0 -4.8 Peptidoglycan-associated lipoprotein compare
MPMX20_00927 -4.0 -10.9 Glutamate 5-kinase compare
MPMX20_03426 -4.0 -9.2 Phosphoribosylformylglycinamidine synthase compare
MPMX20_00556 -3.9 -6.5 Ornithine carbamoyltransferase subunit F compare
MPMX20_01355 -3.8 -1.7 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_04443 -3.8 -2.6 Sec-independent protein translocase protein TatB compare
MPMX20_04442 -3.8 -3.7 Sec-independent protein translocase protein TatC compare
MPMX20_03003 -3.7 -7.5 Histidinol-phosphate aminotransferase compare
MPMX20_00740 -3.7 -3.6 Carbamoyl-phosphate synthase large chain compare
MPMX20_04521 -3.6 -6.0 Acetylglutamate kinase compare
MPMX20_00105 -3.6 -12.2 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_00226 -3.6 -6.0 Bifunctional purine biosynthesis protein PurH compare
MPMX20_01369 -3.6 -7.3 Tol-Pal system protein TolB compare
MPMX20_03006 -3.6 -6.0 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX20_04531 -3.6 -7.6 Cystathionine gamma-synthase compare
MPMX20_03468 -3.6 -5.4 T-protein compare
MPMX20_04523 -3.5 -6.3 Acetylornithine deacetylase compare
MPMX20_03002 -3.5 -10.2 Histidinol dehydrogenase compare
MPMX20_01368 -3.5 -4.1 hypothetical protein compare
MPMX20_01570 -3.4 -2.4 Integration host factor subunit beta compare
MPMX20_00230 -3.4 -6.5 Homoserine O-succinyltransferase compare
MPMX20_03217 -3.4 -3.3 NADH-quinone oxidoreductase subunit B compare
MPMX20_03004 -3.3 -7.8 Histidine biosynthesis bifunctional protein HisB compare
MPMX20_00710 -3.3 -11.5 Bifunctional aspartokinase/homoserine dehydrogenase 1 compare
MPMX20_04444 -3.3 -2.0 Sec-independent protein translocase protein TatA compare
MPMX20_03681 -3.2 -11.3 Amino-acid acetyltransferase compare
MPMX20_00712 -3.2 -8.6 Threonine synthase compare
MPMX20_00711 -3.2 -9.5 Homoserine kinase compare
MPMX20_01567 -3.2 -2.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_01097 -3.2 -5.3 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_00998 -3.1 -3.7 Sec translocon accessory complex subunit YajC compare
MPMX20_03007 -3.1 -6.0 Imidazole glycerol phosphate synthase subunit HisF compare
MPMX20_03001 -3.1 -9.4 ATP phosphoribosyltransferase compare
MPMX20_04374 -3.1 -3.0 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_03209 -3.1 -3.0 NADH-quinone oxidoreductase subunit K compare
MPMX20_01030 -3.1 -5.5 Lon protease compare
MPMX20_00773 -3.1 -10.1 Catabolite repressor/activator compare
MPMX20_00739 -3.0 -2.1 Carbamoyl-phosphate synthase small chain compare
MPMX20_03019 -3.0 -8.0 hypothetical protein compare
MPMX20_00745 -3.0 -2.9 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_04498 -3.0 -7.9 L-threonine dehydratase biosynthetic IlvA compare
MPMX20_01548 -3.0 -2.0 putative ABC transporter ATP-binding/permease protein compare
MPMX20_00109 -2.9 -13.6 hypothetical protein compare
MPMX20_04449 -2.9 -5.6 Uridine phosphorylase conserved
MPMX20_01334 -2.9 -6.5 Phosphoglucomutase compare
MPMX20_04522 -2.9 -5.6 N-acetyl-gamma-glutamyl-phosphate reductase compare
MPMX20_04140 -2.9 -6.2 Malate dehydrogenase compare
MPMX20_00767 -2.9 -7.7 3-isopropylmalate dehydratase large subunit 1 compare
MPMX20_03264 -2.9 -4.3 Chorismate synthase compare
MPMX20_02591 -2.8 -4.3 DNA-binding protein H-NS compare
MPMX20_01156 -2.8 -5.1 hypothetical protein compare
MPMX20_00087 -2.8 -1.9 DNA-directed RNA polymerase subunit omega compare
MPMX20_01367 -2.8 -5.9 Tol-Pal system protein TolR compare
MPMX20_04532 -2.8 -2.7 Met repressor compare
MPMX20_03018 -2.8 -2.7 hypothetical protein compare
MPMX20_04162 -2.7 -2.7 3-dehydroquinate dehydratase compare
MPMX20_01349 -2.7 -4.5 Citrate synthase compare
MPMX20_03153 -2.7 -1.8 hypothetical protein compare
MPMX20_03267 -2.7 -3.7 Phosphohistidine phosphatase SixA compare
MPMX20_04110 -2.7 -3.7 Nitrogen regulatory protein compare
MPMX20_01366 -2.6 -5.3 Tol-Pal system protein TolQ compare
MPMX20_02102 -2.6 -2.6 hypothetical protein compare
MPMX20_01361 -2.6 -5.0 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_03208 -2.6 -4.7 NADH-quinone oxidoreductase subunit L compare
MPMX20_03212 -2.6 -3.9 NADH-quinone oxidoreductase subunit H compare
MPMX20_04524 -2.6 -11.9 Phosphoenolpyruvate carboxylase compare
MPMX20_03213 -2.6 -6.6 NADH-quinone oxidoreductase subunit G compare
MPMX20_00110 -2.5 -11.8 hypothetical protein compare
MPMX20_02766 -2.5 -1.7 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_02513 -2.5 -8.9 Tryptophan synthase beta chain compare
MPMX20_01950 -2.5 -2.4 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_04552 -2.5 -4.1 ATP-dependent 6-phosphofructokinase isozyme 1 compare
MPMX20_02593 -2.5 -12.7 Regulator of RpoS compare
MPMX20_01354 -2.4 -2.9 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_01607 -2.4 -3.3 Outer membrane protein A compare
MPMX20_03490 -2.4 -4.5 SsrA-binding protein compare
MPMX20_02512 -2.4 -8.1 Tryptophan biosynthesis protein TrpCF compare
MPMX20_04496 -2.4 -6.1 Ketol-acid reductoisomerase (NADP(+)) compare
MPMX20_03211 -2.4 -3.6 NADH-quinone oxidoreductase subunit I compare
MPMX20_00976 -2.4 -2.8 Pyrroline-5-carboxylate reductase compare
MPMX20_03591 -2.3 -6.2 Glucitol operon repressor compare
MPMX20_04278 -2.3 -2.2 3-dehydroquinate synthase compare
MPMX20_04650 -2.3 -1.6 tRNA modification GTPase MnmE compare
MPMX20_00108 -2.3 -14.6 hypothetical protein compare
MPMX20_01984 -2.3 -1.6 Ribonuclease T compare
MPMX20_03216 -2.3 -8.5 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_03017 -2.3 -8.9 hypothetical protein compare
MPMX20_04189 -2.3 -4.0 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_02574 -2.3 -1.5 putative intracellular septation protein A compare
MPMX20_00720 -2.2 -1.5 Chaperone protein DnaK compare
MPMX20_02768 -2.2 -2.2 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_04497 -2.2 -6.2 HTH-type transcriptional regulator GltC compare
MPMX20_03214 -2.2 -6.4 NADH-quinone oxidoreductase subunit F compare
MPMX20_01286 -2.1 -2.0 Sec-independent protein translocase protein TatE compare
MPMX20_01549 -2.1 -2.5 ATP-binding/permease protein CydD compare
MPMX20_03210 -2.1 -4.5 NADH-quinone oxidoreductase subunit J compare
MPMX20_04469 -2.1 -2.5 Adenylate cyclase compare
MPMX20_04530 -2.1 -9.3 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_03215 -2.1 -3.2 NADH-quinone oxidoreductase subunit E compare
MPMX20_04489 -2.1 -10.5 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_02514 -2.1 -5.0 Tryptophan synthase alpha chain compare
MPMX20_03206 -2.1 -6.6 NADH-quinone oxidoreductase subunit N compare
MPMX20_02646 -2.1 -2.0 hypothetical protein compare
MPMX20_02203 -2.1 -2.8 hypothetical protein compare
MPMX20_03466 -2.1 -8.0 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX20_03005 -2.1 -5.7 Imidazole glycerol phosphate synthase subunit HisH compare
MPMX20_01362 -2.0 -3.6 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_04768 -2.0 -5.6 hypothetical protein compare
MPMX20_00241 -2.0 -7.1 Glucose-6-phosphate isomerase compare
MPMX20_02770 -2.0 -4.0 Dihydroneopterin triphosphate diphosphatase compare
MPMX20_03021 -2.0 -3.1 hypothetical protein compare
MPMX20_04194 -2.0 -2.1 Peptide deformylase compare
MPMX20_02511 -2.0 -7.8 Bifunctional protein TrpGD compare
MPMX20_04028 -2.0 -2.7 hypothetical protein compare
MPMX20_02767 -2.0 -1.9 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_02344 -2.0 -2.6 hypothetical protein compare
MPMX20_00682 -2.0 -6.7 Phosphopentomutase conserved
MPMX20_03010 -1.9 -1.3 UDP-glucose 4-epimerase compare
MPMX20_04440 -1.9 -1.3 Transcription antitermination protein RfaH compare
MPMX20_00102 -1.9 -1.3 hypothetical protein compare
MPMX20_03020 -1.9 -6.0 hypothetical protein compare
MPMX20_03013 -1.9 -5.9 dTDP-glucose 4,6-dehydratase compare
MPMX20_03218 -1.9 -3.4 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_03207 -1.9 -4.4 NADH-quinone oxidoreductase subunit M compare
MPMX20_03154 -1.9 -8.0 Inner membrane protein YejM compare
MPMX20_00106 -1.9 -2.6 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_04484 -1.9 -7.2 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
MPMX20_01028 -1.9 -1.3 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_02510 -1.8 -10.1 Anthranilate synthase component 1 compare
MPMX20_02063 -1.8 -7.9 Protein mlc compare
MPMX20_04275 -1.8 -1.3 Ribulose-phosphate 3-epimerase compare
MPMX20_03022 -1.8 -1.3 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_04111 -1.8 -4.2 RNase adapter protein RapZ compare
MPMX20_01181 -1.8 -3.2 Putative transferase YhbX compare
MPMX20_00768 -1.8 -8.5 3-isopropylmalate dehydrogenase compare
MPMX20_03742 -1.8 -6.2 HTH-type transcriptional regulator GalR compare
MPMX20_01616 -1.8 -1.2 Heat shock protein HspQ compare
MPMX20_04038 -1.7 -4.8 Glucitol operon repressor compare
MPMX20_03012 -1.7 -6.7 Glucose-1-phosphate thymidylyltransferase 1 compare
MPMX20_01722 -1.7 -1.6 putative csgAB operon transcriptional regulatory protein compare
MPMX20_04119 -1.7 -1.2 DNA polymerase III subunit chi compare
MPMX20_04197 -1.7 -2.3 Trk system potassium uptake protein TrkA compare
MPMX20_01350 -1.7 -4.0 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_04626 -1.6 -2.2 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_00769 -1.6 -7.6 2-isopropylmalate synthase compare
MPMX20_03469 -1.6 -7.2 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive compare
MPMX20_04692 -1.6 -1.2 hypothetical protein compare
MPMX20_03233 -1.6 -8.8 HTH-type transcriptional regulator GntR compare
MPMX20_01322 -1.6 -6.4 N-acetylglucosamine repressor compare
MPMX20_01351 -1.6 -3.2 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_03390 -1.6 -5.4 Outer membrane protein assembly factor BamB compare
MPMX20_04483 -1.6 -1.5 Lipid III flippase compare
MPMX20_04529 -1.6 -5.0 5,10-methylenetetrahydrofolate reductase compare
MPMX20_01958 -1.6 -1.0 Fumarase D compare
MPMX20_01029 -1.6 -2.1 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_04243 -1.6 -1.3 hypothetical protein compare
MPMX20_03248 -1.6 -4.3 Colicin V production protein compare
MPMX20_00086 -1.5 -2.2 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_04595 -1.5 -1.0 Glutamine synthetase compare
MPMX20_00766 -1.5 -4.3 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_00747 -1.5 -2.7 Ribosomal RNA small subunit methyltransferase A compare
MPMX20_02549 -1.5 -3.4 hypothetical protein compare
MPMX20_02478 -1.5 -3.9 Putrescine export system ATP-binding protein SapF compare
MPMX20_01356 -1.5 -6.3 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_01188 -1.5 -3.5 hypothetical protein compare
MPMX20_03015 -1.5 -11.4 Phosphoglucosamine mutase compare
MPMX20_04480 -1.4 -5.7 UDP-N-acetyl-D-mannosaminuronic acid transferase compare
MPMX20_00453 -1.4 -1.3 RNA-binding protein Hfq compare
MPMX20_03629 -1.4 -3.3 Protein-L-isoaspartate O-methyltransferase compare
MPMX20_03852 -1.4 -6.8 Cystathionine beta-lyase MetC compare
MPMX20_00136 -1.4 -1.3 hypothetical protein compare
MPMX20_04647 -1.3 -4.9 hypothetical protein compare
MPMX20_01353 -1.3 -2.8 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_04306 -1.3 -3.9 Glycerol-3-phosphate regulon repressor compare
MPMX20_01073 -1.3 -1.9 Nucleoid-associated protein YbaB compare
MPMX20_01901 -1.3 -1.3 Integration host factor subunit alpha compare
MPMX20_01352 -1.3 -5.7 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_02098 -1.3 -5.4 HTH-type transcriptional repressor RspR compare
MPMX20_02475 -1.3 -2.6 Putrescine export system permease protein SapB compare
MPMX20_03016 -1.3 -9.9 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_02701 -1.3 -1.5 Fatty acid metabolism regulator protein compare
MPMX20_04684 -1.3 -5.4 hypothetical protein compare
MPMX20_01357 -1.3 -3.7 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_01741 -1.3 -3.7 Dihydroorotase compare
MPMX20_02535 -1.3 -1.9 Pyrimidine-specific ribonucleoside hydrolase RihB compare
MPMX20_03685 -1.3 -1.2 RecBCD enzyme subunit RecC compare


Specific Phenotypes

For 3 genes in this experiment

For carbon source Uridine in Enterobacter sp. TBS_079

For carbon source Uridine across organisms