Experiment set9S368 for Enterobacter sp. TBS_079

Compare to:

Parabanic Acid carbon source

200 most important genes:

  gene name fitness t score description  
MPMX20_04442 -5.5 -3.8 Sec-independent protein translocase protein TatC compare
MPMX20_00831 -5.1 -5.5 RNA polymerase-binding transcription factor DksA compare
MPMX20_01570 -5.1 -2.5 Integration host factor subunit beta compare
MPMX20_01286 -5.0 -1.9 Sec-independent protein translocase protein TatE compare
MPMX20_01355 -4.9 -1.1 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_00626 -4.9 -2.2 hypothetical protein compare
MPMX20_03018 -4.6 -3.2 hypothetical protein compare
MPMX20_01548 -4.6 -3.1 putative ABC transporter ATP-binding/permease protein compare
MPMX20_04444 -4.2 -1.3 Sec-independent protein translocase protein TatA compare
MPMX20_00388 -4.2 -0.9 hypothetical protein compare
MPMX20_02574 -4.0 -2.7 putative intracellular septation protein A compare
MPMX20_02767 -3.9 -2.7 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_00453 -3.8 -1.9 RNA-binding protein Hfq compare
MPMX20_01741 -3.8 -7.4 Dihydroorotase compare
MPMX20_01366 -3.8 -4.9 Tol-Pal system protein TolQ compare
MPMX20_02826 -3.8 -2.2 Cold shock-like protein CspB compare
MPMX20_00514 -3.8 -7.6 Fructose-1,6-bisphosphatase class 1 compare
MPMX20_03209 -3.7 -2.9 NADH-quinone oxidoreductase subunit K compare
MPMX20_00745 -3.7 -5.3 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_01362 -3.7 -6.1 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_01474 -3.6 -4.5 hypothetical protein compare
MPMX20_04162 -3.6 -5.2 3-dehydroquinate dehydratase compare
MPMX20_01361 -3.6 -8.4 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_00110 -3.5 -17.7 hypothetical protein compare
MPMX20_03408 -3.4 -2.0 Co-chaperone protein HscB compare
MPMX20_01028 -3.4 -2.4 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_04440 -3.4 -1.5 Transcription antitermination protein RfaH compare
MPMX20_01030 -3.3 -7.9 Lon protease compare
MPMX20_04028 -3.3 -2.1 hypothetical protein compare
MPMX20_04483 -3.3 -2.3 Lipid III flippase compare
MPMX20_03310 -3.3 -5.8 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_03021 -3.3 -8.1 hypothetical protein compare
MPMX20_03010 -3.3 -5.4 UDP-glucose 4-epimerase compare
MPMX20_01972 -3.2 -1.0 tRNA-Val compare
MPMX20_03019 -3.1 -14.9 hypothetical protein compare
MPMX20_02204 -3.0 -6.1 hypothetical protein compare
MPMX20_01367 -3.0 -5.8 Tol-Pal system protein TolR compare
MPMX20_01354 -3.0 -2.0 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_03685 -3.0 -2.0 RecBCD enzyme subunit RecC compare
MPMX20_04595 -2.9 -1.7 Glutamine synthetase compare
MPMX20_01549 -2.9 -4.6 ATP-binding/permease protein CydD compare
MPMX20_04768 -2.9 -17.1 hypothetical protein compare
MPMX20_04601 -2.8 -2.1 DNA polymerase I compare
MPMX20_01118 -2.8 -0.8 hypothetical protein compare
MPMX20_00105 -2.7 -9.5 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_00102 -2.7 -3.7 hypothetical protein compare
MPMX20_03022 -2.7 -5.7 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_03407 -2.7 -4.1 Chaperone protein HscA compare
MPMX20_00899 -2.7 -1.3 Ribonuclease HI compare
MPMX20_03013 -2.7 -10.6 dTDP-glucose 4,6-dehydratase compare
MPMX20_04639 -2.7 -1.0 Phosphate-binding protein PstS compare
MPMX20_03020 -2.6 -5.1 hypothetical protein compare
MPMX20_01950 -2.6 -3.2 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_01369 -2.6 -5.7 Tol-Pal system protein TolB compare
MPMX20_00739 -2.5 -4.1 Carbamoyl-phosphate synthase small chain compare
MPMX20_03683 -2.5 -3.8 RecBCD enzyme subunit RecB compare
MPMX20_04650 -2.5 -4.3 tRNA modification GTPase MnmE compare
MPMX20_03216 -2.5 -7.8 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_04626 -2.5 -4.1 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_02475 -2.4 -4.0 Putrescine export system permease protein SapB compare
MPMX20_00556 -2.4 -4.8 Ornithine carbamoyltransferase subunit F compare
MPMX20_01370 -2.4 -2.3 Peptidoglycan-associated lipoprotein compare
MPMX20_01552 -2.4 -4.5 hypothetical protein compare
MPMX20_01098 -2.4 -2.9 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_01596 -2.4 -13.4 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_00793 -2.4 -2.5 DNA gyrase inhibitor YacG compare
MPMX20_04008 -2.4 -2.9 Inner membrane protein YqjE compare
MPMX20_00340 -2.3 -2.4 hypothetical protein compare
MPMX20_03267 -2.3 -4.1 Phosphohistidine phosphatase SixA compare
MPMX20_03226 -2.3 -4.4 Acetate kinase compare
MPMX20_01333 -2.3 -3.3 Negative modulator of initiation of replication compare
MPMX20_02305 -2.2 -2.3 hypothetical protein compare
MPMX20_03946 -2.2 -4.4 hypothetical protein compare
MPMX20_04522 -2.2 -4.3 N-acetyl-gamma-glutamyl-phosphate reductase compare
MPMX20_01334 -2.2 -4.8 Phosphoglucomutase compare
MPMX20_03007 -2.1 -3.6 Imidazole glycerol phosphate synthase subunit HisF compare
MPMX20_04140 -2.1 -4.8 Malate dehydrogenase compare
MPMX20_00109 -2.1 -10.6 hypothetical protein compare
MPMX20_04275 -2.1 -2.2 Ribulose-phosphate 3-epimerase compare
MPMX20_03017 -2.1 -7.1 hypothetical protein compare
MPMX20_03426 -2.1 -7.2 Phosphoribosylformylglycinamidine synthase compare
MPMX20_03488 -2.1 -1.9 Persistence and stress-resistance antitoxin PasI compare
MPMX20_04077 -2.1 -5.6 Argininosuccinate synthase compare
MPMX20_00108 -2.1 -10.2 hypothetical protein compare
MPMX20_03206 -2.1 -6.5 NADH-quinone oxidoreductase subunit N compare
MPMX20_01368 -2.1 -2.8 hypothetical protein compare
MPMX20_04119 -2.0 -1.7 DNA polymerase III subunit chi compare
MPMX20_03674 -2.0 -2.0 Sulfur acceptor protein CsdE compare
MPMX20_03213 -2.0 -6.0 NADH-quinone oxidoreductase subunit G compare
MPMX20_04110 -2.0 -3.1 Nitrogen regulatory protein compare
MPMX20_04243 -2.0 -1.0 hypothetical protein compare
MPMX20_03382 -2.0 -2.5 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_00773 -2.0 -6.1 Catabolite repressor/activator compare
MPMX20_00106 -2.0 -5.6 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_04520 -2.0 -5.6 Argininosuccinate lyase compare
MPMX20_03433 -2.0 -1.8 Ferredoxin YfhL compare
MPMX20_04465 -1.9 -3.6 Tyrosine recombinase XerC compare
MPMX20_03218 -1.9 -2.6 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_00740 -1.9 -5.5 Carbamoyl-phosphate synthase large chain compare
MPMX20_03490 -1.9 -3.3 SsrA-binding protein compare
MPMX20_04642 -1.8 -1.8 Phosphate import ATP-binding protein PstB compare
MPMX20_02494 -1.8 -3.5 Orotidine 5'-phosphate decarboxylase compare
MPMX20_04029 -1.8 -2.2 Cyclic dipyrimidine nucleotide synthase compare
MPMX20_04197 -1.8 -4.8 Trk system potassium uptake protein TrkA compare
MPMX20_01567 -1.8 -5.0 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_01350 -1.8 -2.1 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_04443 -1.8 -1.5 Sec-independent protein translocase protein TatB compare
MPMX20_01566 -1.8 -6.1 Phosphoserine aminotransferase compare
MPMX20_01357 -1.8 -2.3 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_03214 -1.8 -4.4 NADH-quinone oxidoreductase subunit F compare
MPMX20_02307 -1.8 -1.9 hypothetical protein compare
MPMX20_04685 -1.8 -4.7 hypothetical protein compare
MPMX20_00093 -1.7 -4.6 Orotate phosphoribosyltransferase compare
MPMX20_04489 -1.7 -8.0 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_04189 -1.7 -3.2 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_03208 -1.7 -3.3 NADH-quinone oxidoreductase subunit L compare
MPMX20_01097 -1.7 -2.8 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_01607 -1.7 -3.0 Outer membrane protein A compare
MPMX20_04278 -1.7 -2.8 3-dehydroquinate synthase compare
MPMX20_02827 -1.7 -3.1 hypothetical protein compare
MPMX20_04532 -1.7 -1.1 Met repressor compare
MPMX20_02150 -1.7 -3.0 Acyl-coenzyme A thioesterase PaaI compare
MPMX20_03227 -1.7 -4.1 Phosphate acetyltransferase compare
MPMX20_03015 -1.7 -10.6 Phosphoglucosamine mutase compare
MPMX20_03309 -1.7 -2.0 Phosphocarrier protein HPr compare
MPMX20_01029 -1.7 -2.9 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_03923 -1.7 -1.9 hypothetical protein compare
MPMX20_04416 -1.7 -2.8 Endoglucanase compare
MPMX20_03390 -1.7 -4.0 Outer membrane protein assembly factor BamB compare
MPMX20_03215 -1.7 -1.9 NADH-quinone oxidoreductase subunit E compare
MPMX20_01186 -1.6 -3.9 Transcriptional activator protein ExaE compare
MPMX20_02593 -1.6 -7.3 Regulator of RpoS compare
MPMX20_02770 -1.6 -2.7 Dihydroneopterin triphosphate diphosphatase compare
MPMX20_03012 -1.6 -6.3 Glucose-1-phosphate thymidylyltransferase 1 compare
MPMX20_00693 -1.6 -3.1 Phosphoserine phosphatase compare
MPMX20_03207 -1.6 -3.4 NADH-quinone oxidoreductase subunit M compare
MPMX20_02643 -1.6 -2.4 hypothetical protein compare
MPMX20_04467 -1.6 -3.5 Diaminopimelate epimerase compare
MPMX20_01550 -1.6 -1.8 Thioredoxin reductase compare
MPMX20_04170 -1.6 -1.7 DNA-binding protein Fis compare
MPMX20_04641 -1.6 -2.0 Phosphate transport system permease protein PstA compare
MPMX20_01005 -1.6 -2.4 Transcriptional repressor NrdR compare
MPMX20_00262 -1.6 -2.1 Zinc uptake regulation protein compare
MPMX20_00266 -1.6 -1.7 Phage shock protein G compare
MPMX20_01181 -1.6 -3.0 Putative transferase YhbX compare
MPMX20_02476 -1.5 -1.9 Putrescine export system permease protein SapC compare
MPMX20_03338 -1.5 -1.9 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_04111 -1.5 -2.1 RNase adapter protein RapZ compare
MPMX20_00222 -1.5 -1.7 hypothetical protein compare
MPMX20_03253 -1.5 -3.3 tRNA pseudouridine synthase A compare
MPMX20_04385 -1.5 -3.1 hypothetical protein compare
MPMX20_02701 -1.5 -1.6 Fatty acid metabolism regulator protein compare
MPMX20_02477 -1.5 -2.8 Peptide transport system ATP-binding protein SapD compare
MPMX20_00213 -1.5 -1.5 Thiazole synthase compare
MPMX20_02114 -1.5 -2.5 hypothetical protein compare
MPMX20_02549 -1.5 -2.5 hypothetical protein compare
MPMX20_04276 -1.5 -2.9 DNA adenine methylase compare
MPMX20_02344 -1.4 -1.2 hypothetical protein compare
MPMX20_03687 -1.4 -1.4 hypothetical protein compare
MPMX20_01478 -1.4 -2.5 Deoxyribose operon repressor compare
MPMX20_01958 -1.4 -0.6 Fumarase D compare
MPMX20_02224 -1.4 -3.4 hypothetical protein compare
MPMX20_04491 -1.4 -2.0 Thioredoxin 1 compare
MPMX20_03154 -1.4 -3.9 Inner membrane protein YejM compare
MPMX20_01073 -1.4 -1.1 Nucleoid-associated protein YbaB compare
MPMX20_02481 -1.4 -3.8 Right origin-binding protein compare
MPMX20_02478 -1.4 -3.6 Putrescine export system ATP-binding protein SapF compare
MPMX20_02645 -1.4 -3.4 Ribosome-binding ATPase YchF compare
MPMX20_02635 -1.4 -1.2 Release factor glutamine methyltransferase compare
MPMX20_03986 -1.4 -1.2 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_01349 -1.4 -2.6 Citrate synthase compare
MPMX20_03753 -1.4 -3.1 Tyrosine recombinase XerD compare
MPMX20_01901 -1.3 -1.1 Integration host factor subunit alpha compare
MPMX20_03771 -1.3 -4.3 D-3-phosphoglycerate dehydrogenase compare
MPMX20_03247 -1.3 -2.7 Amidophosphoribosyltransferase compare
MPMX20_03463 -1.3 -2.3 Ribosomal large subunit pseudouridine synthase D compare
MPMX20_03354 -1.3 -4.0 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_00577 -1.3 -4.6 hypothetical protein compare
MPMX20_03580 -1.3 -3.0 Protein RecA compare
MPMX20_03016 -1.3 -7.1 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_04670 -1.3 -1.2 hypothetical protein compare
MPMX20_04298 -1.2 -1.3 hypothetical protein compare
MPMX20_03157 -1.2 -4.7 hypothetical protein compare
MPMX20_02109 -1.2 -2.0 IS3 family transposase ISEal1 compare
MPMX20_04759 -1.2 -1.3 IS3 family transposase ISYen3 compare
MPMX20_03036 -1.2 -2.4 Putative acetyltransferase compare
MPMX20_02102 -1.2 -1.0 hypothetical protein compare
MPMX20_02571 -1.2 -3.5 Outer membrane protein W compare
MPMX20_04469 -1.2 -1.5 Adenylate cyclase compare
MPMX20_02757 -1.2 -2.5 Glucose-6-phosphate 1-dehydrogenase compare
MPMX20_03469 -1.2 -3.6 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive compare
MPMX20_01768 -1.2 -1.5 Large ribosomal RNA subunit accumulation protein YceD compare
MPMX20_02119 -1.2 -5.0 hypothetical protein compare
MPMX20_02243 -1.2 -1.6 HTH-type transcriptional regulator SutR compare
MPMX20_02591 -1.1 -2.1 DNA-binding protein H-NS compare
MPMX20_02903 -1.1 -1.3 hypothetical protein compare
MPMX20_03767 -1.1 -2.1 Xaa-Pro aminopeptidase compare
MPMX20_02546 -1.1 -1.2 hypothetical protein compare
MPMX20_03468 -1.1 -2.2 T-protein compare
MPMX20_04687 -1.1 -4.4 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Enterobacter sp. TBS_079 in carbon source experiments

For carbon source Parabanic Acid across organisms