Experiment set9S367 for Enterobacter sp. TBS_079

Compare to:

D-Glucosamine Hydrochloride carbon source

200 most important genes:

  gene name fitness t score description  
MPMX20_03354 -7.4 -5.1 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_01566 -7.0 -9.6 Phosphoserine aminotransferase compare
MPMX20_00693 -6.7 -6.5 Phosphoserine phosphatase compare
MPMX20_03771 -6.6 -10.1 D-3-phosphoglycerate dehydrogenase compare
MPMX20_03681 -6.5 -11.6 Amino-acid acetyltransferase compare
MPMX20_00831 -6.4 -6.2 RNA polymerase-binding transcription factor DksA compare
MPMX20_03007 -6.4 -4.4 Imidazole glycerol phosphate synthase subunit HisF compare
MPMX20_01324 -6.3 -7.4 Glucosamine-6-phosphate deaminase conserved
MPMX20_04499 -6.2 -9.5 Dihydroxy-acid dehydratase compare
MPMX20_03468 -6.2 -4.3 T-protein compare
MPMX20_00712 -6.0 -7.2 Threonine synthase compare
MPMX20_00225 -6.0 -8.2 Phosphoribosylamine--glycine ligase compare
MPMX20_03006 -6.0 -7.1 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX20_03264 -5.9 -4.1 Chorismate synthase compare
MPMX20_04077 -5.9 -9.8 Argininosuccinate synthase compare
MPMX20_03003 -5.9 -8.0 Histidinol-phosphate aminotransferase compare
MPMX20_01098 -5.8 -5.7 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_03338 -5.8 -5.7 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_00544 -5.8 -6.9 Aspartate carbamoyltransferase catalytic subunit compare
MPMX20_03008 -5.7 -8.8 Histidine biosynthesis bifunctional protein HisIE compare
MPMX20_03426 -5.7 -13.4 Phosphoribosylformylglycinamidine synthase compare
MPMX20_00230 -5.7 -7.9 Homoserine O-succinyltransferase compare
MPMX20_00226 -5.6 -7.7 Bifunctional purine biosynthesis protein PurH compare
MPMX20_03002 -5.6 -12.5 Histidinol dehydrogenase compare
MPMX20_03001 -5.5 -10.6 ATP phosphoribosyltransferase compare
MPMX20_04496 -5.5 -3.8 Ketol-acid reductoisomerase (NADP(+)) compare
MPMX20_00927 -5.5 -16.1 Glutamate 5-kinase compare
MPMX20_02494 -5.5 -5.3 Orotidine 5'-phosphate decarboxylase compare
MPMX20_00928 -5.4 -12.1 Gamma-glutamyl phosphate reductase compare
MPMX20_04162 -5.4 -3.7 3-dehydroquinate dehydratase compare
MPMX20_04522 -5.3 -7.3 N-acetyl-gamma-glutamyl-phosphate reductase compare
MPMX20_04520 -5.3 -7.3 Argininosuccinate lyase compare
MPMX20_00768 -5.3 -14.1 3-isopropylmalate dehydrogenase compare
MPMX20_03247 -5.3 -9.4 Amidophosphoribosyltransferase compare
MPMX20_01349 -5.3 -5.1 Citrate synthase compare
MPMX20_00711 -5.2 -13.9 Homoserine kinase compare
MPMX20_01366 -5.2 -7.1 Tol-Pal system protein TolQ compare
MPMX20_01567 -5.2 -3.6 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_01741 -5.1 -3.6 Dihydroorotase compare
MPMX20_03004 -5.1 -11.9 Histidine biosynthesis bifunctional protein HisB compare
MPMX20_04523 -5.1 -9.2 Acetylornithine deacetylase compare
MPMX20_00740 -5.0 -9.6 Carbamoyl-phosphate synthase large chain compare
MPMX20_01097 -4.9 -7.5 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_00093 -4.9 -4.8 Orotate phosphoribosyltransferase compare
MPMX20_01596 -4.9 -18.8 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_00976 -4.8 -3.3 Pyrroline-5-carboxylate reductase compare
MPMX20_00710 -4.8 -17.3 Bifunctional aspartokinase/homoserine dehydrogenase 1 compare
MPMX20_00739 -4.8 -4.7 Carbamoyl-phosphate synthase small chain compare
MPMX20_01354 -4.7 -4.5 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_02514 -4.7 -7.8 Tryptophan synthase alpha chain compare
MPMX20_01548 -4.7 -4.5 putative ABC transporter ATP-binding/permease protein compare
MPMX20_03852 -4.6 -15.7 Cystathionine beta-lyase MetC compare
MPMX20_04189 -4.6 -5.5 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_04552 -4.6 -6.2 ATP-dependent 6-phosphofructokinase isozyme 1 compare
MPMX20_04278 -4.5 -3.1 3-dehydroquinate synthase compare
MPMX20_00766 -4.5 -8.6 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_04497 -4.5 -9.9 HTH-type transcriptional regulator GltC compare
MPMX20_04521 -4.4 -8.0 Acetylglutamate kinase compare
MPMX20_02513 -4.4 -14.0 Tryptophan synthase beta chain compare
MPMX20_04531 -4.4 -12.6 Cystathionine gamma-synthase compare
MPMX20_00767 -4.4 -12.9 3-isopropylmalate dehydratase large subunit 1 compare
MPMX20_03310 -4.3 -3.0 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_03005 -4.2 -9.5 Imidazole glycerol phosphate synthase subunit HisH compare
MPMX20_04524 -4.2 -18.1 Phosphoenolpyruvate carboxylase compare
MPMX20_01549 -4.1 -4.0 ATP-binding/permease protein CydD compare
MPMX20_01368 -4.1 -7.8 hypothetical protein compare
MPMX20_01369 -4.1 -12.5 Tol-Pal system protein TolB compare
MPMX20_03986 -4.0 -3.9 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_04498 -4.0 -12.4 L-threonine dehydratase biosynthetic IlvA compare
MPMX20_04442 -3.9 -9.1 Sec-independent protein translocase protein TatC compare
MPMX20_01950 -3.9 -5.3 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_00102 -3.9 -2.7 hypothetical protein compare
MPMX20_01028 -3.9 -2.7 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_04768 -3.8 -15.1 hypothetical protein compare
MPMX20_00556 -3.8 -11.6 Ornithine carbamoyltransferase subunit F compare
MPMX20_03022 -3.8 -2.6 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_02574 -3.6 -4.3 putative intracellular septation protein A compare
MPMX20_00106 -3.6 -5.5 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_03019 -3.6 -19.2 hypothetical protein compare
MPMX20_04444 -3.6 -2.6 Sec-independent protein translocase protein TatA compare
MPMX20_01362 -3.6 -7.1 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_03466 -3.5 -9.4 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX20_04483 -3.5 -3.4 Lipid III flippase compare
MPMX20_01367 -3.5 -9.7 Tol-Pal system protein TolR compare
MPMX20_04595 -3.4 -2.4 Glutamine synthetase compare
MPMX20_02512 -3.4 -13.3 Tryptophan biosynthesis protein TrpCF compare
MPMX20_04650 -3.4 -4.6 tRNA modification GTPase MnmE compare
MPMX20_00745 -3.4 -6.8 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_04626 -3.3 -4.5 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_02511 -3.3 -13.4 Bifunctional protein TrpGD compare
MPMX20_02476 -3.3 -3.1 Putrescine export system permease protein SapC compare
MPMX20_03010 -3.2 -5.8 UDP-glucose 4-epimerase compare
MPMX20_01361 -3.2 -10.1 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_03382 -3.2 -2.2 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_02510 -3.1 -15.7 Anthranilate synthase component 1 compare
MPMX20_03309 -3.1 -4.0 Phosphocarrier protein HPr compare
MPMX20_03683 -3.0 -4.1 RecBCD enzyme subunit RecB compare
MPMX20_01030 -3.0 -9.3 Lon protease compare
MPMX20_04640 -3.0 -4.0 Phosphate transport system permease protein PstC compare
MPMX20_01334 -3.0 -10.6 Phosphoglucomutase compare
MPMX20_03409 -3.0 -4.0 Iron-binding protein IscA compare
MPMX20_03408 -2.9 -3.4 Co-chaperone protein HscB compare
MPMX20_03685 -2.8 -5.4 RecBCD enzyme subunit RecC compare
MPMX20_00110 -2.8 -15.6 hypothetical protein compare
MPMX20_01984 -2.8 -3.2 Ribonuclease T compare
MPMX20_04275 -2.8 -3.7 Ribulose-phosphate 3-epimerase compare
MPMX20_00109 -2.8 -18.6 hypothetical protein compare
MPMX20_03018 -2.8 -6.9 hypothetical protein compare
MPMX20_01370 -2.7 -4.9 Peptidoglycan-associated lipoprotein compare
MPMX20_01355 -2.7 -1.7 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_04393 -2.7 -6.7 Low-affinity inorganic phosphate transporter 1 compare
MPMX20_00453 -2.7 -2.2 RNA-binding protein Hfq compare
MPMX20_03490 -2.7 -5.3 SsrA-binding protein compare
MPMX20_04642 -2.7 -3.1 Phosphate import ATP-binding protein PstB compare
MPMX20_01286 -2.7 -2.1 Sec-independent protein translocase protein TatE compare
MPMX20_03013 -2.7 -12.7 dTDP-glucose 4,6-dehydratase compare
MPMX20_04197 -2.6 -6.9 Trk system potassium uptake protein TrkA compare
MPMX20_04530 -2.6 -11.1 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_04469 -2.5 -5.6 Adenylate cyclase compare
MPMX20_03705 -2.5 -9.9 Diaminopimelate decarboxylase compare
MPMX20_00769 -2.5 -8.4 2-isopropylmalate synthase compare
MPMX20_04443 -2.5 -3.0 Sec-independent protein translocase protein TatB compare
MPMX20_01972 -2.5 -1.5 tRNA-Val compare
MPMX20_03407 -2.4 -4.3 Chaperone protein HscA compare
MPMX20_04262 -2.4 -8.5 Acetylornithine/succinyldiaminopimelate aminotransferase compare
MPMX20_03090 -2.4 -1.9 Methionine--tRNA ligase compare
MPMX20_04119 -2.4 -3.1 DNA polymerase III subunit chi compare
MPMX20_00105 -2.4 -12.4 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_04641 -2.3 -3.5 Phosphate transport system permease protein PstA compare
MPMX20_01901 -2.3 -2.8 Integration host factor subunit alpha compare
MPMX20_01607 -2.3 -4.6 Outer membrane protein A compare
MPMX20_04529 -2.3 -8.6 5,10-methylenetetrahydrofolate reductase compare
MPMX20_02591 -2.3 -7.6 DNA-binding protein H-NS compare
MPMX20_03226 -2.3 -4.9 Acetate kinase compare
MPMX20_01551 -2.3 -7.3 Leucine-responsive regulatory protein compare
MPMX20_01029 -2.2 -5.4 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_04279 -2.2 -2.3 Shikimate kinase 1 compare
MPMX20_03509 -2.1 -1.8 hypothetical protein compare
MPMX20_03469 -2.1 -7.8 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive compare
MPMX20_00241 -2.1 -10.5 Glucose-6-phosphate isomerase compare
MPMX20_02635 -2.1 -3.3 Release factor glutamine methyltransferase compare
MPMX20_01382 -2.1 -3.1 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
MPMX20_00807 -2.1 -3.9 Pyruvate dehydrogenase E1 component compare
MPMX20_00773 -2.1 -10.7 Catabolite repressor/activator compare
MPMX20_02826 -2.1 -3.3 Cold shock-like protein CspB compare
MPMX20_03642 -2.1 -9.4 Sulfite reductase [NADPH] hemoprotein beta-component compare
MPMX20_00721 -2.0 -3.7 Chaperone protein DnaJ compare
MPMX20_04038 -2.0 -5.6 Glucitol operon repressor compare
MPMX20_01552 -2.0 -5.1 hypothetical protein compare
MPMX20_03308 -2.0 -7.4 Cysteine synthase A compare
MPMX20_02477 -2.0 -4.4 Peptide transport system ATP-binding protein SapD compare
MPMX20_01722 -1.9 -1.9 putative csgAB operon transcriptional regulatory protein compare
MPMX20_04467 -1.9 -7.7 Diaminopimelate epimerase compare
MPMX20_02767 -1.9 -3.7 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_01734 -1.9 -8.5 Lipid A biosynthesis lauroyltransferase compare
MPMX20_03021 -1.9 -6.3 hypothetical protein compare
MPMX20_03012 -1.9 -9.8 Glucose-1-phosphate thymidylyltransferase 1 compare
MPMX20_02766 -1.9 -3.8 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_00708 -1.8 -6.0 Aerobic respiration control protein ArcA compare
MPMX20_03643 -1.8 -7.8 Sulfite reductase [NADPH] flavoprotein alpha-component compare
MPMX20_00197 -1.8 -1.8 tRNA-Tyr compare
MPMX20_03641 -1.8 -5.0 Phosphoadenosine phosphosulfate reductase compare
MPMX20_01969 -1.8 -4.9 Carbonic anhydrase 1 compare
MPMX20_04028 -1.8 -3.1 hypothetical protein compare
MPMX20_02475 -1.8 -5.3 Putrescine export system permease protein SapB compare
MPMX20_02768 -1.8 -2.4 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_02701 -1.8 -2.8 Fatty acid metabolism regulator protein compare
MPMX20_00825 -1.8 -1.6 Aspartate 1-decarboxylase compare
MPMX20_00812 -1.7 -7.0 Aconitate hydratase B compare
MPMX20_00133 -1.7 -7.1 Mannitol operon repressor compare
MPMX20_04465 -1.7 -5.0 Tyrosine recombinase XerC compare
MPMX20_01005 -1.6 -4.8 Transcriptional repressor NrdR compare
MPMX20_04110 -1.6 -5.4 Nitrogen regulatory protein compare
MPMX20_01570 -1.6 -2.7 Integration host factor subunit beta compare
MPMX20_04489 -1.6 -9.1 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_04276 -1.6 -4.1 DNA adenine methylase compare
MPMX20_03396 -1.6 -5.5 Nucleoside diphosphate kinase compare
MPMX20_00108 -1.6 -10.4 hypothetical protein compare
MPMX20_03440 -1.5 -4.5 Elongation factor 4 compare
MPMX20_03753 -1.5 -5.8 Tyrosine recombinase XerD compare
MPMX20_00899 -1.5 -2.0 Ribonuclease HI compare
MPMX20_03132 -1.5 -6.8 Tagatose-6-phosphate kinase compare
MPMX20_00747 -1.5 -4.3 Ribosomal RNA small subunit methyltransferase A compare
MPMX20_00086 -1.5 -2.6 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_03591 -1.5 -6.3 Glucitol operon repressor compare
MPMX20_00087 -1.5 -2.8 DNA-directed RNA polymerase subunit omega compare
MPMX20_03248 -1.5 -2.2 Colicin V production protein compare
MPMX20_01156 -1.4 -4.2 hypothetical protein compare
MPMX20_00492 -1.4 -7.4 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX20_04670 -1.4 -1.6 hypothetical protein compare
MPMX20_02770 -1.4 -4.6 Dihydroneopterin triphosphate diphosphatase compare
MPMX20_04141 -1.4 -5.0 Arginine repressor compare
MPMX20_02672 -1.4 -11.4 hypothetical protein compare
MPMX20_03207 -1.4 -4.8 NADH-quinone oxidoreductase subunit M compare
MPMX20_04194 -1.4 -2.0 Peptide deformylase compare
MPMX20_03020 -1.4 -3.9 hypothetical protein compare
MPMX20_00998 -1.4 -2.3 Sec translocon accessory complex subunit YajC compare
MPMX20_02913 -1.4 -1.7 hypothetical protein compare
MPMX20_00514 -1.4 -5.2 Fructose-1,6-bisphosphatase class 1 compare
MPMX20_04557 -1.3 -6.5 Sensor histidine kinase CpxA compare


Specific Phenotypes

For 2 genes in this experiment

For carbon source D-Glucosamine Hydrochloride in Enterobacter sp. TBS_079

For carbon source D-Glucosamine Hydrochloride across organisms