Experiment set9S365 for Enterobacter sp. TBS_079

Compare to:

Putrescine Dihydrochloride carbon source

200 most important genes:

  gene name fitness t score description  
MPMX20_00086 -7.1 -4.4 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_04532 -5.9 -3.1 Met repressor compare
MPMX20_02344 -5.9 -2.4 hypothetical protein compare
MPMX20_03285 -5.3 -1.3 hypothetical protein compare
MPMX20_01286 -5.2 -2.1 Sec-independent protein translocase protein TatE compare
MPMX20_02646 -4.9 -2.3 hypothetical protein compare
MPMX20_01972 -4.8 -1.1 tRNA-Val compare
MPMX20_03018 -4.8 -3.3 hypothetical protein compare
MPMX20_01548 -4.8 -3.3 putative ABC transporter ATP-binding/permease protein compare
MPMX20_03215 -4.6 -4.5 NADH-quinone oxidoreductase subunit E compare
MPMX20_03678 -4.4 -1.0 tRNA-Met compare
MPMX20_01549 -4.3 -3.0 ATP-binding/permease protein CydD compare
MPMX20_00388 -4.3 -1.0 hypothetical protein compare
MPMX20_03217 -4.2 -5.7 NADH-quinone oxidoreductase subunit B compare
MPMX20_02574 -4.2 -2.9 putative intracellular septation protein A compare
MPMX20_00453 -4.1 -2.2 RNA-binding protein Hfq compare
MPMX20_02826 -4.0 -2.5 Cold shock-like protein CspB compare
MPMX20_03090 -3.9 -1.3 Methionine--tRNA ligase compare
MPMX20_04374 -3.8 -3.7 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_01029 -3.8 -2.6 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_03498 -3.8 -3.2 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_03010 -3.8 -2.6 UDP-glucose 4-epimerase compare
MPMX20_04626 -3.7 -2.5 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_01368 -3.7 -4.8 hypothetical protein compare
MPMX20_04272 -3.6 -1.2 hypothetical protein compare
MPMX20_01028 -3.6 -2.5 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_04440 -3.6 -1.7 Transcription antitermination protein RfaH compare
MPMX20_00745 -3.6 -6.5 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_02768 -3.5 -3.5 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_04119 -3.5 -2.2 DNA polymerase III subunit chi compare
MPMX20_04197 -3.5 -4.7 Trk system potassium uptake protein TrkA compare
MPMX20_03267 -3.4 -4.1 Phosphohistidine phosphatase SixA compare
MPMX20_03019 -3.4 -18.1 hypothetical protein compare
MPMX20_01369 -3.3 -6.9 Tol-Pal system protein TolB compare
MPMX20_03490 -3.3 -5.2 SsrA-binding protein compare
MPMX20_03022 -3.2 -5.3 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_03210 -3.2 -6.4 NADH-quinone oxidoreductase subunit J compare
MPMX20_01366 -3.2 -3.5 Tol-Pal system protein TolQ compare
MPMX20_00514 -3.1 -9.2 Fructose-1,6-bisphosphatase class 1 compare
MPMX20_00093 -3.1 -9.0 Orotate phosphoribosyltransferase compare
MPMX20_00106 -3.0 -7.2 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_03382 -3.0 -2.1 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_01361 -3.0 -7.6 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_04443 -3.0 -2.6 Sec-independent protein translocase protein TatB compare
MPMX20_03021 -3.0 -10.0 hypothetical protein compare
MPMX20_03212 -3.0 -4.9 NADH-quinone oxidoreductase subunit H compare
MPMX20_01691 -2.9 -2.1 hypothetical protein compare
MPMX20_04768 -2.9 -16.4 hypothetical protein compare
MPMX20_00109 -2.9 -15.2 hypothetical protein compare
MPMX20_02766 -2.9 -4.8 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_04469 -2.9 -3.8 Adenylate cyclase compare
MPMX20_01901 -2.9 -2.5 Integration host factor subunit alpha compare
MPMX20_00899 -2.8 -1.5 Ribonuclease HI compare
MPMX20_00105 -2.8 -10.1 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_01266 -2.8 -2.9 Acireductone dioxygenase compare
MPMX20_04642 -2.8 -2.5 Phosphate import ATP-binding protein PstB compare
MPMX20_03218 -2.7 -3.8 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_01741 -2.7 -5.6 Dihydroorotase compare
MPMX20_04572 -2.7 -2.7 hypothetical protein compare
MPMX20_03013 -2.7 -10.8 dTDP-glucose 4,6-dehydratase compare
MPMX20_04110 -2.7 -4.2 Nitrogen regulatory protein compare
MPMX20_03409 -2.6 -2.6 Iron-binding protein IscA compare
MPMX20_03209 -2.6 -2.0 NADH-quinone oxidoreductase subunit K compare
MPMX20_03206 -2.6 -8.5 NADH-quinone oxidoreductase subunit N compare
MPMX20_00110 -2.6 -12.0 hypothetical protein compare
MPMX20_03923 -2.6 -3.5 hypothetical protein compare
MPMX20_03207 -2.6 -6.1 NADH-quinone oxidoreductase subunit M compare
MPMX20_00030 -2.6 -1.7 hypothetical protein compare
MPMX20_00102 -2.5 -3.9 hypothetical protein compare
MPMX20_01950 -2.5 -2.9 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_04444 -2.5 -1.7 Sec-independent protein translocase protein TatA compare
MPMX20_02476 -2.5 -3.0 Putrescine export system permease protein SapC compare
MPMX20_04137 -2.5 -3.9 Inner membrane protein YhcB compare
MPMX20_03260 -2.5 -1.9 hypothetical protein compare
MPMX20_00544 -2.4 -4.5 Aspartate carbamoyltransferase catalytic subunit compare
MPMX20_01030 -2.4 -6.1 Lon protease compare
MPMX20_04520 -2.4 -6.7 Argininosuccinate lyase compare
MPMX20_03685 -2.4 -6.7 RecBCD enzyme subunit RecC compare
MPMX20_03017 -2.4 -7.7 hypothetical protein compare
MPMX20_04442 -2.4 -4.7 Sec-independent protein translocase protein TatC compare
MPMX20_04521 -2.4 -5.3 Acetylglutamate kinase compare
MPMX20_01552 -2.3 -5.1 hypothetical protein compare
MPMX20_00556 -2.3 -5.6 Ornithine carbamoyltransferase subunit F compare
MPMX20_02309 -2.3 -5.4 hypothetical protein compare
MPMX20_01648 -2.3 -1.9 hypothetical protein compare
MPMX20_01382 -2.3 -2.9 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
MPMX20_01367 -2.3 -4.1 Tol-Pal system protein TolR compare
MPMX20_03426 -2.3 -8.6 Phosphoribosylformylglycinamidine synthase compare
MPMX20_03047 -2.2 -3.5 dCTP deaminase compare
MPMX20_02591 -2.2 -3.8 DNA-binding protein H-NS compare
MPMX20_04077 -2.2 -6.4 Argininosuccinate synthase compare
MPMX20_03683 -2.2 -5.6 RecBCD enzyme subunit RecB compare
MPMX20_03753 -2.2 -5.0 Tyrosine recombinase XerD compare
MPMX20_03310 -2.2 -3.8 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_02701 -2.2 -2.3 Fatty acid metabolism regulator protein compare
MPMX20_02494 -2.2 -6.2 Orotidine 5'-phosphate decarboxylase compare
MPMX20_04483 -2.2 -3.5 Lipid III flippase compare
MPMX20_04276 -2.2 -5.1 DNA adenine methylase compare
MPMX20_00740 -2.2 -5.5 Carbamoyl-phosphate synthase large chain compare
MPMX20_04278 -2.1 -4.7 3-dehydroquinate synthase compare
MPMX20_01256 -2.1 -2.3 hypothetical protein compare
MPMX20_00226 -2.1 -5.1 Bifunctional purine biosynthesis protein PurH compare
MPMX20_04189 -2.1 -4.5 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_03213 -2.1 -6.3 NADH-quinone oxidoreductase subunit G compare
MPMX20_04275 -2.1 -2.1 Ribulose-phosphate 3-epimerase compare
MPMX20_04522 -2.1 -5.7 N-acetyl-gamma-glutamyl-phosphate reductase compare
MPMX20_04029 -2.1 -2.6 Cyclic dipyrimidine nucleotide synthase compare
MPMX20_01156 -2.1 -2.3 hypothetical protein compare
MPMX20_02275 -2.0 -3.0 Acetyltransferase compare
MPMX20_03208 -2.0 -4.0 NADH-quinone oxidoreductase subunit L compare
MPMX20_03687 -2.0 -1.7 hypothetical protein compare
MPMX20_01596 -2.0 -11.6 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_01097 -2.0 -3.8 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_03247 -2.0 -4.4 Amidophosphoribosyltransferase compare
MPMX20_03354 -2.0 -4.1 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_03407 -2.0 -2.8 Chaperone protein HscA compare
MPMX20_01334 -2.0 -5.1 Phosphoglucomutase compare
MPMX20_04489 -2.0 -8.9 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_02203 -2.0 -1.6 hypothetical protein compare
MPMX20_00108 -1.9 -10.4 hypothetical protein compare
MPMX20_02707 -1.9 -2.0 Septum site-determining protein MinC compare
MPMX20_01355 -1.9 -1.0 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_04595 -1.9 -2.0 Glutamine synthetase compare
MPMX20_01354 -1.9 -2.0 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_01566 -1.9 -6.0 Phosphoserine aminotransferase compare
MPMX20_03986 -1.9 -2.6 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_00831 -1.8 -2.7 RNA polymerase-binding transcription factor DksA compare
MPMX20_02549 -1.8 -2.4 hypothetical protein compare
MPMX20_02593 -1.8 -9.0 Regulator of RpoS compare
MPMX20_01567 -1.8 -4.0 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_00693 -1.8 -4.3 Phosphoserine phosphatase compare
MPMX20_03264 -1.8 -2.6 Chorismate synthase compare
MPMX20_04465 -1.8 -4.3 Tyrosine recombinase XerC compare
MPMX20_04598 -1.7 -4.7 Oxygen-independent coproporphyrinogen III oxidase compare
MPMX20_03681 -1.7 -6.0 Amino-acid acetyltransferase compare
MPMX20_01607 -1.7 -2.2 Outer membrane protein A compare
MPMX20_02477 -1.7 -2.4 Peptide transport system ATP-binding protein SapD compare
MPMX20_02767 -1.7 -2.8 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_03216 -1.7 -5.0 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_03771 -1.7 -4.4 D-3-phosphoglycerate dehydrogenase compare
MPMX20_00773 -1.7 -5.1 Catabolite repressor/activator compare
MPMX20_04279 -1.6 -1.6 Shikimate kinase 1 compare
MPMX20_03214 -1.6 -4.4 NADH-quinone oxidoreductase subunit F compare
MPMX20_01362 -1.6 -2.8 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_03440 -1.6 -3.4 Elongation factor 4 compare
MPMX20_03338 -1.6 -2.3 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_02732 -1.6 -2.8 PhoP/PhoQ regulator MgrB compare
MPMX20_00928 -1.6 -5.8 Gamma-glutamyl phosphate reductase compare
MPMX20_02929 -1.6 -1.6 hypothetical protein compare
MPMX20_01765 -1.6 -2.6 Ribonuclease E compare
MPMX20_01021 -1.6 -3.2 Cytochrome bo(3) ubiquinol oxidase subunit 3 compare
MPMX20_04530 -1.6 -6.1 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_00537 -1.6 -6.3 Trehalose-6-phosphate hydrolase compare
MPMX20_01349 -1.6 -4.6 Citrate synthase compare
MPMX20_03020 -1.5 -3.3 hypothetical protein compare
MPMX20_02478 -1.5 -4.6 Putrescine export system ATP-binding protein SapF compare
MPMX20_03408 -1.5 -1.7 Co-chaperone protein HscB compare
MPMX20_02825 -1.5 -1.7 Cold shock-like protein CspB compare
MPMX20_00577 -1.5 -5.3 hypothetical protein compare
MPMX20_04028 -1.4 -1.1 hypothetical protein compare
MPMX20_00055 -1.4 -2.8 hypothetical protein compare
MPMX20_04668 -1.4 -1.4 hypothetical protein compare
MPMX20_03974 -1.4 -2.2 hypothetical protein compare
MPMX20_00721 -1.4 -1.7 Chaperone protein DnaJ compare
MPMX20_02903 -1.4 -1.6 hypothetical protein compare
MPMX20_04664 -1.4 -1.9 hypothetical protein compare
MPMX20_03016 -1.4 -8.1 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_03015 -1.4 -9.2 Phosphoglucosamine mutase compare
MPMX20_00747 -1.4 -2.5 Ribosomal RNA small subunit methyltransferase A compare
MPMX20_03012 -1.4 -5.3 Glucose-1-phosphate thymidylyltransferase 1 compare
MPMX20_03806 -1.4 -2.3 hypothetical protein compare
MPMX20_03443 -1.3 -3.4 Anti-sigma-E factor RseA compare
MPMX20_01370 -1.3 -2.1 Peptidoglycan-associated lipoprotein compare
MPMX20_04523 -1.3 -4.0 Acetylornithine deacetylase compare
MPMX20_00565 -1.3 -4.6 Cardiolipin synthase A compare
MPMX20_01098 -1.3 -2.1 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_03154 -1.3 -4.3 Inner membrane protein YejM compare
MPMX20_04253 -1.3 -0.8 Malonate decarboxylase acyl carrier protein compare
MPMX20_04059 -1.3 -2.1 hypothetical protein compare
MPMX20_02474 -1.3 -2.9 Peptide transport periplasmic protein SapA compare
MPMX20_00927 -1.3 -5.1 Glutamate 5-kinase compare
MPMX20_02645 -1.2 -3.6 Ribosome-binding ATPase YchF compare
MPMX20_00929 -1.2 -1.4 tRNA-Thr compare
MPMX20_03394 -1.2 -1.9 Cytoskeleton protein RodZ compare
MPMX20_03036 -1.2 -2.8 Putative acetyltransferase compare
MPMX20_03211 -1.2 -1.9 NADH-quinone oxidoreductase subunit I compare
MPMX20_01734 -1.2 -3.2 Lipid A biosynthesis lauroyltransferase compare
MPMX20_03970 -1.2 -2.4 hypothetical protein compare
MPMX20_04038 -1.2 -2.8 Glucitol operon repressor compare
MPMX20_01240 -1.2 -2.6 Enterobactin biosynthesis protein YbdZ compare
MPMX20_03571 -1.2 -1.1 tRNA-Arg compare
MPMX20_03356 -1.2 -5.7 Polyphosphate kinase compare
MPMX20_00998 -1.2 -2.3 Sec translocon accessory complex subunit YajC compare
MPMX20_04496 -1.2 -2.5 Ketol-acid reductoisomerase (NADP(+)) compare
MPMX20_00133 -1.2 -2.3 Mannitol operon repressor compare
MPMX20_03390 -1.2 -3.2 Outer membrane protein assembly factor BamB compare
MPMX20_00739 -1.2 -2.1 Carbamoyl-phosphate synthase small chain compare
MPMX20_04491 -1.2 -1.9 Thioredoxin 1 compare
MPMX20_01323 -1.2 -3.7 N-acetylglucosamine-6-phosphate deacetylase compare
MPMX20_02204 -1.2 -2.9 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Enterobacter sp. TBS_079 in carbon source experiments

For carbon source Putrescine Dihydrochloride across organisms