Experiment set9S361 for Enterobacter sp. TBS_079

Compare to:

L-Citrulline carbon source

200 most important genes:

  gene name fitness t score description  
MPMX20_01370 -7.2 -4.8 Peptidoglycan-associated lipoprotein compare
MPMX20_03267 -6.2 -3.9 Phosphohistidine phosphatase SixA compare
MPMX20_03209 -5.4 -3.1 NADH-quinone oxidoreductase subunit K compare
MPMX20_04443 -5.3 -3.1 Sec-independent protein translocase protein TatB compare
MPMX20_02912 -5.3 -1.3 hypothetical protein compare
MPMX20_01354 -5.2 -3.0 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_03285 -5.2 -1.2 hypothetical protein compare
MPMX20_04670 -4.9 -2.3 hypothetical protein compare
MPMX20_01972 -4.7 -1.1 tRNA-Val compare
MPMX20_03018 -4.7 -3.3 hypothetical protein compare
MPMX20_01548 -4.7 -3.2 putative ABC transporter ATP-binding/permease protein compare
MPMX20_04444 -4.3 -1.4 Sec-independent protein translocase protein TatA compare
MPMX20_01549 -4.2 -2.9 ATP-binding/permease protein CydD compare
MPMX20_00873 -3.9 -2.5 Protein rof compare
MPMX20_03218 -3.7 -4.6 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_02477 -3.7 -2.6 Peptide transport system ATP-binding protein SapD compare
MPMX20_02574 -3.7 -3.6 putative intracellular septation protein A compare
MPMX20_03010 -3.7 -2.6 UDP-glucose 4-epimerase compare
MPMX20_03022 -3.6 -2.5 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_00831 -3.6 -5.4 RNA polymerase-binding transcription factor DksA compare
MPMX20_03986 -3.6 -2.9 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_03019 -3.5 -17.9 hypothetical protein compare
MPMX20_03408 -3.5 -2.2 Co-chaperone protein HscB compare
MPMX20_01028 -3.5 -2.4 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_04440 -3.5 -1.7 Transcription antitermination protein RfaH compare
MPMX20_04483 -3.5 -2.4 Lipid III flippase compare
MPMX20_04275 -3.4 -2.3 Ribulose-phosphate 3-epimerase compare
MPMX20_04119 -3.3 -2.1 DNA polymerase III subunit chi compare
MPMX20_04278 -3.3 -5.5 3-dehydroquinate synthase compare
MPMX20_00110 -3.2 -15.7 hypothetical protein compare
MPMX20_01361 -3.1 -6.9 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_03212 -3.1 -6.1 NADH-quinone oxidoreductase subunit H compare
MPMX20_04133 -3.0 -3.8 Stringent starvation protein A compare
MPMX20_01984 -3.0 -2.6 Ribonuclease T compare
MPMX20_02825 -2.9 -3.7 Cold shock-like protein CspB compare
MPMX20_01367 -2.9 -4.7 Tol-Pal system protein TolR compare
MPMX20_02591 -2.9 -5.1 DNA-binding protein H-NS compare
MPMX20_03020 -2.9 -6.5 hypothetical protein compare
MPMX20_04639 -2.8 -1.1 Phosphate-binding protein PstS compare
MPMX20_00746 -2.8 -3.3 Protein ApaG compare
MPMX20_00109 -2.8 -14.2 hypothetical protein compare
MPMX20_00106 -2.8 -7.0 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_01118 -2.8 -0.9 hypothetical protein compare
MPMX20_00514 -2.8 -8.1 Fructose-1,6-bisphosphatase class 1 compare
MPMX20_01366 -2.7 -3.7 Tol-Pal system protein TolQ compare
MPMX20_00693 -2.7 -5.3 Phosphoserine phosphatase compare
MPMX20_04768 -2.6 -14.9 hypothetical protein compare
MPMX20_04626 -2.6 -4.7 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_00102 -2.6 -3.8 hypothetical protein compare
MPMX20_03310 -2.6 -5.0 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_03923 -2.6 -3.0 hypothetical protein compare
MPMX20_04650 -2.6 -4.8 tRNA modification GTPase MnmE compare
MPMX20_00108 -2.6 -11.7 hypothetical protein compare
MPMX20_03468 -2.5 -5.0 T-protein compare
MPMX20_00773 -2.5 -8.0 Catabolite repressor/activator compare
MPMX20_03685 -2.5 -5.7 RecBCD enzyme subunit RecC compare
MPMX20_02475 -2.5 -4.9 Putrescine export system permease protein SapB compare
MPMX20_01362 -2.5 -4.2 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_01768 -2.5 -2.8 Large ribosomal RNA subunit accumulation protein YceD compare
MPMX20_03498 -2.5 -2.3 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_04276 -2.4 -5.2 DNA adenine methylase compare
MPMX20_00105 -2.4 -8.3 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_04279 -2.4 -2.6 Shikimate kinase 1 compare
MPMX20_01030 -2.4 -6.4 Lon protease compare
MPMX20_01741 -2.4 -4.7 Dihydroorotase compare
MPMX20_03021 -2.4 -8.7 hypothetical protein compare
MPMX20_03211 -2.4 -3.6 NADH-quinone oxidoreductase subunit I compare
MPMX20_04197 -2.3 -6.3 Trk system potassium uptake protein TrkA compare
MPMX20_04489 -2.3 -10.1 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_01369 -2.3 -5.7 Tol-Pal system protein TolB compare
MPMX20_03683 -2.3 -4.9 RecBCD enzyme subunit RecB compare
MPMX20_02635 -2.3 -2.2 Release factor glutamine methyltransferase compare
MPMX20_04079 -2.3 -2.0 Protein-export membrane protein SecG compare
MPMX20_03214 -2.3 -5.3 NADH-quinone oxidoreductase subunit F compare
MPMX20_02307 -2.3 -2.6 hypothetical protein compare
MPMX20_03382 -2.3 -2.9 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_02701 -2.3 -2.3 Fatty acid metabolism regulator protein compare
MPMX20_03013 -2.3 -8.8 dTDP-glucose 4,6-dehydratase compare
MPMX20_03354 -2.2 -4.4 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_04140 -2.2 -5.6 Malate dehydrogenase compare
MPMX20_01098 -2.2 -3.6 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_00807 -2.2 -3.2 Pyruvate dehydrogenase E1 component compare
MPMX20_01005 -2.1 -2.6 Transcriptional repressor NrdR compare
MPMX20_02707 -2.1 -2.0 Septum site-determining protein MinC compare
MPMX20_03208 -2.1 -4.2 NADH-quinone oxidoreductase subunit L compare
MPMX20_01256 -2.1 -2.4 hypothetical protein compare
MPMX20_00721 -2.1 -2.1 Chaperone protein DnaJ compare
MPMX20_01156 -2.0 -3.3 hypothetical protein compare
MPMX20_00976 -2.0 -3.7 Pyrroline-5-carboxylate reductase compare
MPMX20_03217 -2.0 -3.0 NADH-quinone oxidoreductase subunit B compare
MPMX20_04520 -2.0 -5.6 Argininosuccinate lyase compare
MPMX20_01901 -1.9 -2.0 Integration host factor subunit alpha compare
MPMX20_00226 -1.9 -5.1 Bifunctional purine biosynthesis protein PurH compare
MPMX20_01552 -1.9 -4.7 hypothetical protein compare
MPMX20_01596 -1.9 -11.1 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_03771 -1.9 -6.5 D-3-phosphoglycerate dehydrogenase compare
MPMX20_01543 -1.9 -1.6 ATP-dependent Clp protease adapter protein ClpS compare
MPMX20_03216 -1.9 -6.2 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_03006 -1.9 -4.6 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX20_01566 -1.9 -6.6 Phosphoserine aminotransferase compare
MPMX20_01567 -1.9 -3.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_03407 -1.9 -3.0 Chaperone protein HscA compare
MPMX20_03213 -1.9 -5.8 NADH-quinone oxidoreductase subunit G compare
MPMX20_03338 -1.8 -2.6 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_03490 -1.8 -2.5 SsrA-binding protein compare
MPMX20_01380 -1.8 -1.8 hypothetical protein compare
MPMX20_01334 -1.8 -5.0 Phosphoglucomutase compare
MPMX20_04469 -1.8 -2.5 Adenylate cyclase compare
MPMX20_03210 -1.8 -3.7 NADH-quinone oxidoreductase subunit J compare
MPMX20_00093 -1.8 -4.8 Orotate phosphoribosyltransferase compare
MPMX20_02769 -1.8 -2.0 putative transcriptional regulatory protein YebC compare
MPMX20_03206 -1.8 -5.2 NADH-quinone oxidoreductase subunit N compare
MPMX20_01950 -1.7 -2.1 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_04641 -1.7 -2.2 Phosphate transport system permease protein PstA compare
MPMX20_01734 -1.7 -4.1 Lipid A biosynthesis lauroyltransferase compare
MPMX20_03488 -1.7 -2.4 Persistence and stress-resistance antitoxin PasI compare
MPMX20_00739 -1.7 -2.8 Carbamoyl-phosphate synthase small chain compare
MPMX20_04374 -1.7 -1.5 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_03207 -1.7 -3.4 NADH-quinone oxidoreductase subunit M compare
MPMX20_03687 -1.7 -1.5 hypothetical protein compare
MPMX20_03409 -1.7 -1.8 Iron-binding protein IscA compare
MPMX20_02593 -1.7 -8.7 Regulator of RpoS compare
MPMX20_02732 -1.7 -2.0 PhoP/PhoQ regulator MgrB compare
MPMX20_01350 -1.7 -3.2 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_03012 -1.6 -6.2 Glucose-1-phosphate thymidylyltransferase 1 compare
MPMX20_01620 -1.6 -2.6 Acylphosphatase compare
MPMX20_00225 -1.6 -5.8 Phosphoribosylamine--glycine ligase compare
MPMX20_04272 -1.6 -1.0 hypothetical protein compare
MPMX20_04465 -1.6 -3.1 Tyrosine recombinase XerC compare
MPMX20_03753 -1.6 -3.7 Tyrosine recombinase XerD compare
MPMX20_01097 -1.6 -3.6 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_03017 -1.6 -5.5 hypothetical protein compare
MPMX20_02767 -1.6 -1.6 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_03390 -1.6 -3.2 Outer membrane protein assembly factor BamB compare
MPMX20_00745 -1.6 -2.5 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_03264 -1.6 -3.2 Chorismate synthase compare
MPMX20_02204 -1.6 -4.0 hypothetical protein compare
MPMX20_04442 -1.6 -2.7 Sec-independent protein translocase protein TatC compare
MPMX20_01637 -1.5 -3.9 hypothetical protein compare
MPMX20_04137 -1.5 -2.1 Inner membrane protein YhcB compare
MPMX20_04595 -1.5 -1.4 Glutamine synthetase compare
MPMX20_01382 -1.5 -2.4 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
MPMX20_00537 -1.5 -6.2 Trehalose-6-phosphate hydrolase compare
MPMX20_03334 -1.5 -0.8 hypothetical protein compare
MPMX20_01607 -1.5 -2.1 Outer membrane protein A compare
MPMX20_03426 -1.5 -6.3 Phosphoribosylformylglycinamidine synthase compare
MPMX20_02704 -1.5 -1.5 hypothetical protein compare
MPMX20_00747 -1.5 -3.1 Ribosomal RNA small subunit methyltransferase A compare
MPMX20_04188 -1.5 -1.8 hypothetical protein compare
MPMX20_03405 -1.4 -1.1 Protein IscX compare
MPMX20_01616 -1.4 -1.0 Heat shock protein HspQ compare
MPMX20_01101 -1.4 -1.9 Peptidyl-prolyl cis-trans isomerase B compare
MPMX20_00577 -1.4 -5.2 hypothetical protein compare
MPMX20_03015 -1.4 -9.5 Phosphoglucosamine mutase compare
MPMX20_03132 -1.4 -3.9 Tagatose-6-phosphate kinase compare
MPMX20_04189 -1.4 -2.6 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_00386 -1.4 -1.6 hypothetical protein compare
MPMX20_02768 -1.4 -1.5 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_02643 -1.4 -3.4 hypothetical protein compare
MPMX20_02881 -1.4 -1.6 hypothetical protein compare
MPMX20_02646 -1.4 -0.9 hypothetical protein compare
MPMX20_04162 -1.3 -1.8 3-dehydroquinate dehydratase compare
MPMX20_00350 -1.3 -3.3 hypothetical protein compare
MPMX20_04029 -1.3 -1.6 Cyclic dipyrimidine nucleotide synthase compare
MPMX20_03580 -1.3 -3.0 Protein RecA compare
MPMX20_04484 -1.3 -2.5 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
MPMX20_02355 -1.3 -1.7 D-alanyl-D-alanine dipeptidase compare
MPMX20_00544 -1.3 -3.8 Aspartate carbamoyltransferase catalytic subunit compare
MPMX20_03007 -1.3 -3.0 Imidazole glycerol phosphate synthase subunit HisF compare
MPMX20_03002 -1.3 -4.4 Histidinol dehydrogenase compare
MPMX20_04598 -1.3 -4.0 Oxygen-independent coproporphyrinogen III oxidase compare
MPMX20_03226 -1.3 -2.3 Acetate kinase compare
MPMX20_02757 -1.3 -2.2 Glucose-6-phosphate 1-dehydrogenase compare
MPMX20_03254 -1.3 -1.8 USG-1 protein compare
MPMX20_03770 -1.3 -2.9 5-formyltetrahydrofolate cyclo-ligase compare
MPMX20_03016 -1.3 -7.8 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_04330 -1.3 -2.9 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX20_04628 -1.3 -1.1 ATP synthase protein I compare
MPMX20_02478 -1.3 -3.9 Putrescine export system ATP-binding protein SapF compare
MPMX20_00740 -1.2 -3.7 Carbamoyl-phosphate synthase large chain compare
MPMX20_01695 -1.2 -1.8 putative malonic semialdehyde reductase RutE compare
MPMX20_00453 -1.2 -1.1 RNA-binding protein Hfq compare
MPMX20_03003 -1.2 -4.2 Histidinol-phosphate aminotransferase compare
MPMX20_00812 -1.2 -3.3 Aconitate hydratase B compare
MPMX20_04640 -1.2 -1.7 Phosphate transport system permease protein PstC compare
MPMX20_04433 -1.2 -5.4 Trk system potassium uptake protein TrkH compare
MPMX20_03004 -1.2 -3.9 Histidine biosynthesis bifunctional protein HisB compare
MPMX20_04110 -1.2 -2.1 Nitrogen regulatory protein compare
MPMX20_01099 -1.2 -1.3 hypothetical protein compare
MPMX20_02833 -1.2 -3.1 hypothetical protein compare
MPMX20_04077 -1.2 -4.4 Argininosuccinate synthase compare
MPMX20_02494 -1.2 -3.0 Orotidine 5'-phosphate decarboxylase compare
MPMX20_01181 -1.2 -2.6 Putative transferase YhbX compare
MPMX20_01114 -1.2 -5.0 Putative transcriptional regulator compare
MPMX20_02826 -1.2 -1.0 Cold shock-like protein CspB compare
MPMX20_04552 -1.2 -2.6 ATP-dependent 6-phosphofructokinase isozyme 1 compare
MPMX20_02128 -1.2 -3.3 hypothetical protein compare
MPMX20_04298 -1.2 -1.5 hypothetical protein compare
MPMX20_03678 -1.2 -0.6 tRNA-Met compare
MPMX20_00785 -1.1 -1.7 D-alanine--D-alanine ligase B compare


Specific Phenotypes

None in this experiment

For Enterobacter sp. TBS_079 in carbon source experiments

For carbon source L-Citrulline across organisms