Experiment set9S359 for Enterobacter sp. TBS_079

Compare to:

Gly-DL-Asp carbon source

200 most important genes:

  gene name fitness t score description  
MPMX20_03218 -5.6 -3.9 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_04442 -5.2 -6.2 Sec-independent protein translocase protein TatC compare
MPMX20_01286 -5.2 -2.9 Sec-independent protein translocase protein TatE compare
MPMX20_04532 -5.0 -4.4 Met repressor compare
MPMX20_01355 -4.9 -1.6 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_03211 -4.8 -4.7 NADH-quinone oxidoreductase subunit I compare
MPMX20_03212 -4.5 -6.2 NADH-quinone oxidoreductase subunit H compare
MPMX20_00453 -4.2 -2.9 RNA-binding protein Hfq compare
MPMX20_01567 -4.2 -8.9 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_04189 -4.2 -5.7 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_01349 -4.2 -7.4 Citrate synthase compare
MPMX20_01362 -4.1 -5.6 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_01548 -4.1 -6.2 putative ABC transporter ATP-binding/permease protein compare
MPMX20_03019 -4.0 -18.8 hypothetical protein compare
MPMX20_02591 -3.9 -7.2 DNA-binding protein H-NS compare
MPMX20_01029 -3.9 -2.7 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_03209 -3.9 -3.5 NADH-quinone oxidoreductase subunit K compare
MPMX20_03338 -3.9 -5.7 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_01549 -3.8 -5.2 ATP-binding/permease protein CydD compare
MPMX20_04521 -3.8 -7.7 Acetylglutamate kinase compare
MPMX20_01366 -3.8 -4.3 Tol-Pal system protein TolQ compare
MPMX20_03018 -3.8 -7.0 hypothetical protein compare
MPMX20_03468 -3.8 -8.1 T-protein compare
MPMX20_03408 -3.7 -2.6 Co-chaperone protein HscB compare
MPMX20_00136 -3.7 -1.7 hypothetical protein compare
MPMX20_02494 -3.7 -8.1 Orotidine 5'-phosphate decarboxylase compare
MPMX20_01361 -3.6 -10.1 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_00831 -3.6 -5.1 RNA polymerase-binding transcription factor DksA compare
MPMX20_03208 -3.6 -8.7 NADH-quinone oxidoreductase subunit L compare
MPMX20_01950 -3.6 -5.4 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_01367 -3.6 -6.8 Tol-Pal system protein TolR compare
MPMX20_01607 -3.6 -5.4 Outer membrane protein A compare
MPMX20_03022 -3.6 -4.2 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_03213 -3.6 -12.1 NADH-quinone oxidoreductase subunit G compare
MPMX20_00110 -3.6 -19.2 hypothetical protein compare
MPMX20_00109 -3.5 -21.8 hypothetical protein compare
MPMX20_04119 -3.5 -2.4 DNA polymerase III subunit chi compare
MPMX20_03010 -3.5 -7.0 UDP-glucose 4-epimerase compare
MPMX20_00740 -3.5 -12.2 Carbamoyl-phosphate synthase large chain compare
MPMX20_03215 -3.4 -4.4 NADH-quinone oxidoreductase subunit E compare
MPMX20_04077 -3.4 -10.9 Argininosuccinate synthase compare
MPMX20_03986 -3.3 -3.3 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_01028 -3.3 -3.2 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_00514 -3.3 -9.7 Fructose-1,6-bisphosphatase class 1 compare
MPMX20_00106 -3.3 -6.3 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_04162 -3.3 -6.1 3-dehydroquinate dehydratase compare
MPMX20_04595 -3.3 -2.3 Glutamine synthetase compare
MPMX20_03216 -3.3 -12.3 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_03310 -3.3 -6.2 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_04768 -3.3 -17.3 hypothetical protein compare
MPMX20_01030 -3.2 -9.6 Lon protease compare
MPMX20_03020 -3.2 -7.6 hypothetical protein compare
MPMX20_03021 -3.2 -8.7 hypothetical protein compare
MPMX20_03354 -3.2 -8.2 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_04483 -3.2 -3.8 Lipid III flippase compare
MPMX20_04640 -3.2 -3.7 Phosphate transport system permease protein PstC compare
MPMX20_00225 -3.2 -10.2 Phosphoribosylamine--glycine ligase compare
MPMX20_03382 -3.2 -2.2 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_02766 -3.2 -5.1 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_00226 -3.1 -10.4 Bifunctional purine biosynthesis protein PurH compare
MPMX20_03206 -3.1 -9.4 NADH-quinone oxidoreductase subunit N compare
MPMX20_00739 -3.1 -7.1 Carbamoyl-phosphate synthase small chain compare
MPMX20_00721 -3.1 -4.0 Chaperone protein DnaJ compare
MPMX20_01596 -3.1 -20.5 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_01741 -3.1 -7.8 Dihydroorotase compare
MPMX20_03426 -3.0 -12.6 Phosphoribosylformylglycinamidine synthase compare
MPMX20_03685 -3.0 -4.1 RecBCD enzyme subunit RecC compare
MPMX20_00105 -3.0 -11.4 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_04443 -3.0 -3.0 Sec-independent protein translocase protein TatB compare
MPMX20_01098 -2.9 -3.8 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_01370 -2.9 -5.2 Peptidoglycan-associated lipoprotein compare
MPMX20_04650 -2.9 -4.8 tRNA modification GTPase MnmE compare
MPMX20_03013 -2.9 -12.8 dTDP-glucose 4,6-dehydratase compare
MPMX20_03214 -2.9 -8.4 NADH-quinone oxidoreductase subunit F compare
MPMX20_00745 -2.9 -5.8 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_03210 -2.9 -5.1 NADH-quinone oxidoreductase subunit J compare
MPMX20_00556 -2.9 -7.7 Ornithine carbamoyltransferase subunit F compare
MPMX20_04275 -2.9 -3.3 Ribulose-phosphate 3-epimerase compare
MPMX20_01354 -2.8 -3.3 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_04692 -2.8 -1.6 hypothetical protein compare
MPMX20_04110 -2.8 -4.6 Nitrogen regulatory protein compare
MPMX20_04520 -2.8 -8.9 Argininosuccinate lyase compare
MPMX20_04469 -2.8 -4.7 Adenylate cyclase compare
MPMX20_03207 -2.8 -6.3 NADH-quinone oxidoreductase subunit M compare
MPMX20_00197 -2.8 -2.5 tRNA-Tyr compare
MPMX20_04489 -2.8 -13.1 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_00773 -2.7 -9.9 Catabolite repressor/activator compare
MPMX20_04626 -2.7 -5.2 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_00928 -2.7 -11.3 Gamma-glutamyl phosphate reductase compare
MPMX20_03017 -2.7 -9.8 hypothetical protein compare
MPMX20_00108 -2.7 -15.7 hypothetical protein compare
MPMX20_03490 -2.7 -4.3 SsrA-binding protein compare
MPMX20_00102 -2.6 -4.3 hypothetical protein compare
MPMX20_04278 -2.6 -6.5 3-dehydroquinate synthase compare
MPMX20_04231 -2.6 -1.9 Bacterioferritin-associated ferredoxin compare
MPMX20_04197 -2.6 -6.4 Trk system potassium uptake protein TrkA compare
MPMX20_04140 -2.5 -7.8 Malate dehydrogenase compare
MPMX20_03217 -2.5 -4.5 NADH-quinone oxidoreductase subunit B compare
MPMX20_03247 -2.5 -6.6 Amidophosphoribosyltransferase compare
MPMX20_00927 -2.5 -11.1 Glutamate 5-kinase compare
MPMX20_03683 -2.4 -5.1 RecBCD enzyme subunit RecB compare
MPMX20_03264 -2.4 -4.0 Chorismate synthase compare
MPMX20_01368 -2.4 -2.8 hypothetical protein compare
MPMX20_03012 -2.4 -11.3 Glucose-1-phosphate thymidylyltransferase 1 compare
MPMX20_03681 -2.4 -8.4 Amino-acid acetyltransferase compare
MPMX20_02574 -2.4 -4.2 putative intracellular septation protein A compare
MPMX20_01156 -2.3 -3.7 hypothetical protein compare
MPMX20_01369 -2.3 -6.8 Tol-Pal system protein TolB compare
MPMX20_01334 -2.3 -6.4 Phosphoglucomutase compare
MPMX20_03267 -2.3 -2.5 Phosphohistidine phosphatase SixA compare
MPMX20_04642 -2.3 -2.8 Phosphate import ATP-binding protein PstB compare
MPMX20_02768 -2.2 -3.3 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_03007 -2.2 -5.6 Imidazole glycerol phosphate synthase subunit HisF compare
MPMX20_03591 -2.2 -5.4 Glucitol operon repressor compare
MPMX20_01901 -2.2 -2.7 Integration host factor subunit alpha compare
MPMX20_00441 -2.2 -1.3 Phosphatidylserine decarboxylase proenzyme compare
MPMX20_03006 -2.2 -7.4 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX20_01097 -2.2 -5.7 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_04499 -2.2 -7.8 Dihydroxy-acid dehydratase compare
MPMX20_01765 -2.2 -3.2 Ribonuclease E compare
MPMX20_03015 -2.2 -15.3 Phosphoglucosamine mutase compare
MPMX20_01570 -2.1 -2.6 Integration host factor subunit beta compare
MPMX20_04628 -2.1 -2.1 ATP synthase protein I compare
MPMX20_04496 -2.1 -7.7 Ketol-acid reductoisomerase (NADP(+)) compare
MPMX20_01357 -2.1 -4.7 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_02826 -2.1 -2.8 Cold shock-like protein CspB compare
MPMX20_03008 -2.1 -4.7 Histidine biosynthesis bifunctional protein HisIE compare
MPMX20_01552 -2.1 -5.0 hypothetical protein compare
MPMX20_02593 -2.1 -12.5 Regulator of RpoS compare
MPMX20_00093 -2.1 -6.5 Orotate phosphoribosyltransferase compare
MPMX20_04522 -2.0 -5.7 N-acetyl-gamma-glutamyl-phosphate reductase compare
MPMX20_04530 -2.0 -8.5 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_03004 -2.0 -6.1 Histidine biosynthesis bifunctional protein HisB compare
MPMX20_03407 -1.9 -3.4 Chaperone protein HscA compare
MPMX20_03036 -1.9 -5.4 Putative acetyltransferase compare
MPMX20_01972 -1.9 -1.2 tRNA-Val compare
MPMX20_03090 -1.9 -1.5 Methionine--tRNA ligase compare
MPMX20_02646 -1.9 -1.8 hypothetical protein compare
MPMX20_03882 -1.9 -7.5 Outer membrane protein TolC compare
MPMX20_00998 -1.8 -2.4 Sec translocon accessory complex subunit YajC compare
MPMX20_04279 -1.8 -2.1 Shikimate kinase 1 compare
MPMX20_03440 -1.8 -4.9 Elongation factor 4 compare
MPMX20_00419 -1.8 -7.2 Aspartate ammonia-lyase compare
MPMX20_03466 -1.8 -7.6 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX20_00976 -1.7 -3.0 Pyrroline-5-carboxylate reductase compare
MPMX20_04465 -1.7 -3.9 Tyrosine recombinase XerC compare
MPMX20_02693 -1.7 -2.0 hypothetical protein compare
MPMX20_02635 -1.7 -2.6 Release factor glutamine methyltransferase compare
MPMX20_04276 -1.7 -4.5 DNA adenine methylase compare
MPMX20_03742 -1.7 -5.8 HTH-type transcriptional regulator GalR compare
MPMX20_03390 -1.6 -5.4 Outer membrane protein assembly factor BamB compare
MPMX20_04523 -1.6 -5.3 Acetylornithine deacetylase compare
MPMX20_04598 -1.6 -5.5 Oxygen-independent coproporphyrinogen III oxidase compare
MPMX20_00193 -1.6 -5.8 Dipeptide transport ATP-binding protein DppD compare
MPMX20_01352 -1.6 -5.0 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_00086 -1.6 -2.7 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_00544 -1.6 -4.0 Aspartate carbamoyltransferase catalytic subunit compare
MPMX20_01020 -1.6 -1.2 Cytochrome bo(3) ubiquinol oxidase subunit 4 compare
MPMX20_03003 -1.6 -5.5 Histidinol-phosphate aminotransferase compare
MPMX20_03016 -1.6 -10.8 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_02701 -1.6 -1.8 Fatty acid metabolism regulator protein compare
MPMX20_00241 -1.6 -6.1 Glucose-6-phosphate isomerase compare
MPMX20_02309 -1.5 -3.8 hypothetical protein compare
MPMX20_02478 -1.5 -5.7 Putrescine export system ATP-binding protein SapF compare
MPMX20_02475 -1.5 -3.8 Putrescine export system permease protein SapB compare
MPMX20_04687 -1.5 -6.2 hypothetical protein compare
MPMX20_01616 -1.5 -1.1 Heat shock protein HspQ compare
MPMX20_04444 -1.5 -1.4 Sec-independent protein translocase protein TatA compare
MPMX20_03409 -1.5 -2.0 Iron-binding protein IscA compare
MPMX20_02305 -1.5 -1.8 hypothetical protein compare
MPMX20_03154 -1.5 -6.7 Inner membrane protein YejM compare
MPMX20_01550 -1.5 -2.6 Thioredoxin reductase compare
MPMX20_01350 -1.5 -2.3 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_04344 -1.4 -1.3 hypothetical protein compare
MPMX20_00711 -1.4 -6.9 Homoserine kinase compare
MPMX20_02825 -1.4 -2.1 Cold shock-like protein CspB compare
MPMX20_03356 -1.4 -8.3 Polyphosphate kinase compare
MPMX20_02476 -1.4 -2.2 Putrescine export system permease protein SapC compare
MPMX20_00749 -1.4 -3.9 Chaperone SurA compare
MPMX20_03005 -1.4 -3.9 Imidazole glycerol phosphate synthase subunit HisH compare
MPMX20_04374 -1.4 -1.6 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_04466 -1.4 -3.4 hypothetical protein compare
MPMX20_02102 -1.3 -1.3 hypothetical protein compare
MPMX20_03469 -1.3 -5.1 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive compare
MPMX20_01722 -1.3 -1.3 putative csgAB operon transcriptional regulatory protein compare
MPMX20_02757 -1.3 -3.0 Glucose-6-phosphate 1-dehydrogenase compare
MPMX20_00873 -1.3 -2.0 Protein rof compare
MPMX20_03770 -1.3 -2.4 5-formyltetrahydrofolate cyclo-ligase compare
MPMX20_03002 -1.3 -6.0 Histidinol dehydrogenase compare
MPMX20_01734 -1.3 -4.2 Lipid A biosynthesis lauroyltransferase compare
MPMX20_03396 -1.3 -3.7 Nucleoside diphosphate kinase compare
MPMX20_03132 -1.3 -4.1 Tagatose-6-phosphate kinase compare
MPMX20_02549 -1.3 -3.0 hypothetical protein compare
MPMX20_03763 -1.3 -2.7 Glycine cleavage system H protein compare
MPMX20_02827 -1.3 -4.0 hypothetical protein compare
MPMX20_03850 -1.2 -2.5 Biopolymer transport protein ExbD compare
MPMX20_01356 -1.2 -4.2 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_00712 -1.2 -5.2 Threonine synthase compare
MPMX20_00812 -1.2 -4.3 Aconitate hydratase B compare
MPMX20_02645 -1.2 -4.4 Ribosome-binding ATPase YchF compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source Gly-DL-Asp in Enterobacter sp. TBS_079

For carbon source Gly-DL-Asp across organisms