Experiment set9S354 for Enterobacter sp. TBS_079

Compare to:

L-Phenylalanine carbon source

200 most important genes:

  gene name fitness t score description  
MPMX20_04442 -5.1 -7.0 Sec-independent protein translocase protein TatC compare
MPMX20_01548 -4.9 -3.4 putative ABC transporter ATP-binding/permease protein compare
MPMX20_01972 -4.8 -1.4 tRNA-Val compare
MPMX20_04278 -4.5 -3.1 3-dehydroquinate synthase compare
MPMX20_04162 -4.5 -5.3 3-dehydroquinate dehydratase compare
MPMX20_04444 -4.4 -1.8 Sec-independent protein translocase protein TatA compare
MPMX20_01361 -4.3 -9.2 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_01370 -4.3 -5.6 Peptidoglycan-associated lipoprotein compare
MPMX20_01549 -4.3 -3.0 ATP-binding/permease protein CydD compare
MPMX20_02574 -4.3 -2.9 putative intracellular septation protein A compare
MPMX20_01984 -4.3 -2.9 Ribonuclease T compare
MPMX20_03986 -4.2 -4.2 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_03018 -4.2 -6.4 hypothetical protein compare
MPMX20_01367 -4.1 -9.0 Tol-Pal system protein TolR compare
MPMX20_00514 -4.0 -8.5 Fructose-1,6-bisphosphatase class 1 compare
MPMX20_00740 -4.0 -13.6 Carbamoyl-phosphate synthase large chain compare
MPMX20_01741 -3.9 -7.8 Dihydroorotase compare
MPMX20_00998 -3.9 -3.1 Sec translocon accessory complex subunit YajC compare
MPMX20_00544 -3.9 -7.5 Aspartate carbamoyltransferase catalytic subunit compare
MPMX20_03010 -3.9 -2.7 UDP-glucose 4-epimerase compare
MPMX20_03468 -3.9 -8.0 T-protein compare
MPMX20_03209 -3.9 -4.1 NADH-quinone oxidoreductase subunit K compare
MPMX20_03019 -3.8 -20.0 hypothetical protein compare
MPMX20_04520 -3.8 -13.1 Argininosuccinate lyase compare
MPMX20_00102 -3.8 -2.6 hypothetical protein compare
MPMX20_00109 -3.8 -22.4 hypothetical protein compare
MPMX20_02476 -3.8 -2.6 Putrescine export system permease protein SapC compare
MPMX20_01028 -3.8 -2.6 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_04440 -3.8 -2.2 Transcription antitermination protein RfaH compare
MPMX20_03408 -3.8 -2.6 Co-chaperone protein HscB compare
MPMX20_00106 -3.7 -4.4 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_04483 -3.7 -2.6 Lipid III flippase compare
MPMX20_01349 -3.7 -7.0 Citrate synthase compare
MPMX20_03214 -3.6 -10.1 NADH-quinone oxidoreductase subunit F compare
MPMX20_04119 -3.6 -2.5 DNA polymerase III subunit chi compare
MPMX20_01596 -3.6 -23.8 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_02475 -3.6 -5.5 Putrescine export system permease protein SapB compare
MPMX20_00226 -3.5 -10.1 Bifunctional purine biosynthesis protein PurH compare
MPMX20_04642 -3.5 -2.4 Phosphate import ATP-binding protein PstB compare
MPMX20_04626 -3.5 -4.1 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_04522 -3.4 -7.8 N-acetyl-gamma-glutamyl-phosphate reductase compare
MPMX20_04595 -3.4 -2.3 Glutamine synthetase compare
MPMX20_03017 -3.4 -11.6 hypothetical protein compare
MPMX20_00105 -3.4 -13.5 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_03211 -3.4 -5.8 NADH-quinone oxidoreductase subunit I compare
MPMX20_01098 -3.3 -4.2 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_00110 -3.3 -19.5 hypothetical protein compare
MPMX20_01950 -3.3 -4.5 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_01030 -3.3 -9.9 Lon protease compare
MPMX20_04768 -3.3 -19.2 hypothetical protein compare
MPMX20_03218 -3.3 -4.6 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_01567 -3.2 -7.1 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_01334 -3.2 -9.1 Phosphoglucomutase compare
MPMX20_04140 -3.2 -8.1 Malate dehydrogenase compare
MPMX20_01101 -3.1 -2.8 Peptidyl-prolyl cis-trans isomerase B compare
MPMX20_03021 -3.1 -8.6 hypothetical protein compare
MPMX20_04489 -3.1 -15.9 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_00831 -3.1 -4.4 RNA polymerase-binding transcription factor DksA compare
MPMX20_03338 -3.1 -4.3 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_01362 -3.1 -5.8 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_00453 -3.0 -2.4 RNA-binding protein Hfq compare
MPMX20_01156 -3.0 -4.6 hypothetical protein compare
MPMX20_03683 -3.0 -3.6 RecBCD enzyme subunit RecB compare
MPMX20_04639 -3.0 -1.7 Phosphate-binding protein PstS compare
MPMX20_03210 -3.0 -6.4 NADH-quinone oxidoreductase subunit J compare
MPMX20_03207 -3.0 -6.8 NADH-quinone oxidoreductase subunit M compare
MPMX20_03022 -2.9 -6.5 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_02494 -2.9 -7.8 Orotidine 5'-phosphate decarboxylase compare
MPMX20_01366 -2.9 -6.1 Tol-Pal system protein TolQ compare
MPMX20_01020 -2.9 -1.6 Cytochrome bo(3) ubiquinol oxidase subunit 4 compare
MPMX20_03685 -2.9 -4.8 RecBCD enzyme subunit RecC compare
MPMX20_00773 -2.8 -11.2 Catabolite repressor/activator compare
MPMX20_00739 -2.8 -6.4 Carbamoyl-phosphate synthase small chain compare
MPMX20_02769 -2.8 -2.8 putative transcriptional regulatory protein YebC compare
MPMX20_01355 -2.8 -1.4 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_00231 -2.7 -8.4 Malate synthase A compare
MPMX20_00927 -2.7 -9.0 Glutamate 5-kinase compare
MPMX20_00087 -2.7 -3.5 DNA-directed RNA polymerase subunit omega compare
MPMX20_03216 -2.7 -8.6 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_04532 -2.7 -3.3 Met repressor compare
MPMX20_01354 -2.7 -3.7 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_03681 -2.7 -10.2 Amino-acid acetyltransferase compare
MPMX20_02646 -2.7 -2.7 hypothetical protein compare
MPMX20_03426 -2.7 -11.6 Phosphoribosylformylglycinamidine synthase compare
MPMX20_03206 -2.7 -7.8 NADH-quinone oxidoreductase subunit N compare
MPMX20_01566 -2.7 -8.5 Phosphoserine aminotransferase compare
MPMX20_00693 -2.7 -6.1 Phosphoserine phosphatase compare
MPMX20_04189 -2.7 -6.0 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_03382 -2.6 -3.5 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_03354 -2.6 -7.1 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_00928 -2.6 -9.4 Gamma-glutamyl phosphate reductase compare
MPMX20_03013 -2.6 -10.6 dTDP-glucose 4,6-dehydratase compare
MPMX20_04443 -2.5 -2.7 Sec-independent protein translocase protein TatB compare
MPMX20_03213 -2.5 -7.2 NADH-quinone oxidoreductase subunit G compare
MPMX20_04523 -2.5 -7.3 Acetylornithine deacetylase compare
MPMX20_03310 -2.5 -5.0 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_01369 -2.5 -6.4 Tol-Pal system protein TolB compare
MPMX20_03212 -2.5 -6.0 NADH-quinone oxidoreductase subunit H compare
MPMX20_03267 -2.5 -4.4 Phosphohistidine phosphatase SixA compare
MPMX20_04521 -2.4 -5.7 Acetylglutamate kinase compare
MPMX20_01352 -2.4 -8.2 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_03154 -2.4 -7.8 Inner membrane protein YejM compare
MPMX20_00272 -2.4 -9.9 Aromatic-amino-acid aminotransferase compare
MPMX20_03215 -2.4 -3.3 NADH-quinone oxidoreductase subunit E compare
MPMX20_03771 -2.4 -7.4 D-3-phosphoglycerate dehydrogenase compare
MPMX20_02766 -2.4 -3.5 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_03007 -2.3 -4.2 Imidazole glycerol phosphate synthase subunit HisF compare
MPMX20_01552 -2.3 -6.0 hypothetical protein compare
MPMX20_04650 -2.3 -4.5 tRNA modification GTPase MnmE compare
MPMX20_04197 -2.3 -7.0 Trk system potassium uptake protein TrkA compare
MPMX20_03095 -2.3 -2.0 hypothetical protein compare
MPMX20_01901 -2.3 -2.6 Integration host factor subunit alpha compare
MPMX20_04530 -2.3 -9.1 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_00721 -2.3 -3.5 Chaperone protein DnaJ compare
MPMX20_00556 -2.3 -6.8 Ornithine carbamoyltransferase subunit F compare
MPMX20_00108 -2.3 -12.8 hypothetical protein compare
MPMX20_00232 -2.2 -8.0 Isocitrate lyase compare
MPMX20_00386 -2.2 -3.0 hypothetical protein compare
MPMX20_00093 -2.2 -6.2 Orotate phosphoribosyltransferase compare
MPMX20_00745 -2.2 -4.1 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_02826 -2.2 -2.0 Cold shock-like protein CspB compare
MPMX20_00976 -2.2 -3.9 Pyrroline-5-carboxylate reductase compare
MPMX20_04133 -2.2 -4.5 Stringent starvation protein A compare
MPMX20_04499 -2.2 -7.5 Dihydroxy-acid dehydratase compare
MPMX20_03217 -2.2 -4.6 NADH-quinone oxidoreductase subunit B compare
MPMX20_03020 -2.2 -5.2 hypothetical protein compare
MPMX20_01029 -2.1 -4.2 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_04077 -2.1 -6.0 Argininosuccinate synthase compare
MPMX20_02591 -2.1 -4.6 DNA-binding protein H-NS compare
MPMX20_01097 -2.1 -4.9 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_03247 -2.1 -4.6 Amidophosphoribosyltransferase compare
MPMX20_03012 -2.1 -8.8 Glucose-1-phosphate thymidylyltransferase 1 compare
MPMX20_02701 -2.0 -2.3 Fatty acid metabolism regulator protein compare
MPMX20_03006 -2.0 -5.0 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX20_00086 -2.0 -3.9 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_01351 -2.0 -3.3 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_04469 -2.0 -2.8 Adenylate cyclase compare
MPMX20_01368 -2.0 -2.7 hypothetical protein compare
MPMX20_03208 -1.9 -4.7 NADH-quinone oxidoreductase subunit L compare
MPMX20_02635 -1.9 -2.3 Release factor glutamine methyltransferase compare
MPMX20_04111 -1.9 -3.6 RNase adapter protein RapZ compare
MPMX20_04275 -1.9 -2.5 Ribulose-phosphate 3-epimerase compare
MPMX20_02767 -1.9 -2.5 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_02696 -1.8 -5.8 Murein tetrapeptide carboxypeptidase compare
MPMX20_02149 -1.8 -3.9 3-hydroxyadipyl-CoA dehydrogenase compare
MPMX20_00225 -1.8 -5.3 Phosphoribosylamine--glycine ligase compare
MPMX20_02147 -1.8 -4.7 2,3-dehydroadipyl-CoA hydratase compare
MPMX20_02454 -1.8 -8.3 Transcriptional regulatory protein TyrR conserved
MPMX20_02645 -1.8 -6.4 Ribosome-binding ATPase YchF compare
MPMX20_03015 -1.8 -12.5 Phosphoglucosamine mutase compare
MPMX20_04496 -1.7 -5.3 Ketol-acid reductoisomerase (NADP(+)) compare
MPMX20_03407 -1.7 -3.2 Chaperone protein HscA compare
MPMX20_00712 -1.7 -7.5 Threonine synthase compare
MPMX20_01544 -1.7 -6.7 ATP-dependent Clp protease ATP-binding subunit ClpA compare
MPMX20_01356 -1.7 -5.8 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_03264 -1.7 -3.5 Chorismate synthase compare
MPMX20_03469 -1.7 -6.0 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive compare
MPMX20_03016 -1.7 -10.7 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_04276 -1.6 -3.7 DNA adenine methylase compare
MPMX20_01607 -1.6 -4.1 Outer membrane protein A compare
MPMX20_02151 -1.6 -6.0 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase conserved
MPMX20_00441 -1.6 -1.3 Phosphatidylserine decarboxylase proenzyme compare
MPMX20_04110 -1.6 -2.3 Nitrogen regulatory protein compare
MPMX20_01065 -1.6 -4.0 Multidrug efflux pump subunit AcrA compare
MPMX20_03882 -1.6 -6.5 Outer membrane protein TolC compare
MPMX20_04598 -1.6 -5.4 Oxygen-independent coproporphyrinogen III oxidase compare
MPMX20_04670 -1.6 -2.3 hypothetical protein compare
MPMX20_03629 -1.6 -2.8 Protein-L-isoaspartate O-methyltransferase compare
MPMX20_04641 -1.6 -2.6 Phosphate transport system permease protein PstA compare
MPMX20_00456 -1.6 -5.2 Modulator of FtsH protease HflC compare
MPMX20_01019 -1.5 -3.2 Protoheme IX farnesyltransferase compare
MPMX20_02768 -1.5 -2.0 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_02141 -1.5 -4.4 Bifunctional protein PaaZ compare
MPMX20_04141 -1.5 -3.1 Arginine repressor compare
MPMX20_04058 -1.5 -3.5 hypothetical protein compare
MPMX20_02477 -1.5 -3.0 Peptide transport system ATP-binding protein SapD compare
MPMX20_03037 -1.4 -4.1 hypothetical protein compare
MPMX20_03004 -1.4 -6.5 Histidine biosynthesis bifunctional protein HisB compare
MPMX20_00873 -1.4 -2.0 Protein rof compare
MPMX20_00570 -1.4 -8.0 putative BsuMI modification methylase subunit YdiO compare
MPMX20_02593 -1.4 -8.9 Regulator of RpoS compare
MPMX20_03490 -1.4 -3.9 SsrA-binding protein compare
MPMX20_03003 -1.4 -4.7 Histidinol-phosphate aminotransferase compare
MPMX20_03571 -1.4 -1.5 tRNA-Arg compare
MPMX20_03390 -1.4 -4.3 Outer membrane protein assembly factor BamB compare
MPMX20_03002 -1.4 -6.1 Histidinol dehydrogenase compare
MPMX20_01765 -1.4 -2.3 Ribonuclease E compare
MPMX20_04558 -1.4 -1.5 Protein YiiM compare
MPMX20_01722 -1.4 -1.5 putative csgAB operon transcriptional regulatory protein compare
MPMX20_04309 -1.4 -3.8 Aerobic glycerol-3-phosphate dehydrogenase compare
MPMX20_03509 -1.4 -1.1 hypothetical protein compare
MPMX20_03334 -1.4 -1.3 hypothetical protein compare
MPMX20_00233 -1.3 -5.4 Isocitrate dehydrogenase kinase/phosphatase compare
MPMX20_03283 -1.3 -5.9 Indole-3-pyruvate decarboxylase compare
MPMX20_03376 -1.3 -4.2 HTH-type transcriptional regulator MurR compare
MPMX20_00350 -1.3 -2.9 hypothetical protein compare
MPMX20_00747 -1.3 -2.7 Ribosomal RNA small subunit methyltransferase A compare
MPMX20_01350 -1.3 -1.7 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_04306 -1.3 -2.9 Glycerol-3-phosphate regulon repressor compare
MPMX20_03047 -1.3 -2.7 dCTP deaminase compare


Specific Phenotypes

For 6 genes in this experiment

For carbon source L-Phenylalanine in Enterobacter sp. TBS_079

For carbon source L-Phenylalanine across organisms