Experiment set9S348 for Enterobacter sp. TBS_079

Compare to:

L-Proline carbon source

200 most important genes:

  gene name fitness t score description  
MPMX20_00831 -7.0 -4.8 RNA polymerase-binding transcription factor DksA compare
MPMX20_01370 -6.8 -6.6 Peptidoglycan-associated lipoprotein compare
MPMX20_01368 -6.7 -4.6 hypothetical protein compare
MPMX20_03267 -6.6 -4.6 Phosphohistidine phosphatase SixA compare
MPMX20_03771 -6.5 -11.7 D-3-phosphoglycerate dehydrogenase compare
MPMX20_03986 -6.5 -6.3 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_00693 -6.4 -9.8 Phosphoserine phosphatase compare
MPMX20_03338 -6.4 -4.4 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_00998 -6.3 -4.4 Sec translocon accessory complex subunit YajC compare
MPMX20_01357 -6.1 -6.0 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_03264 -6.1 -4.2 Chorismate synthase compare
MPMX20_01367 -6.1 -6.0 Tol-Pal system protein TolR compare
MPMX20_03426 -6.1 -12.4 Phosphoribosylformylglycinamidine synthase compare
MPMX20_00712 -6.1 -9.3 Threonine synthase compare
MPMX20_03354 -6.0 -12.2 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_01366 -6.0 -7.1 Tol-Pal system protein TolQ compare
MPMX20_00773 -6.0 -10.8 Catabolite repressor/activator compare
MPMX20_01566 -5.8 -15.0 Phosphoserine aminotransferase compare
MPMX20_03209 -5.8 -4.0 NADH-quinone oxidoreductase subunit K compare
MPMX20_01354 -5.7 -3.9 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_04520 -5.7 -7.8 Argininosuccinate lyase compare
MPMX20_02591 -5.7 -3.9 DNA-binding protein H-NS compare
MPMX20_03006 -5.6 -10.1 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX20_01570 -5.6 -3.8 Integration host factor subunit beta compare
MPMX20_04499 -5.6 -14.0 Dihydroxy-acid dehydratase compare
MPMX20_01098 -5.6 -6.6 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_03211 -5.5 -3.8 NADH-quinone oxidoreductase subunit I compare
MPMX20_04531 -5.5 -10.6 Cystathionine gamma-synthase compare
MPMX20_01097 -5.5 -7.6 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_01286 -5.5 -3.6 Sec-independent protein translocase protein TatE compare
MPMX20_03468 -5.5 -8.4 T-protein compare
MPMX20_00226 -5.5 -10.5 Bifunctional purine biosynthesis protein PurH compare
MPMX20_01369 -5.4 -12.1 Tol-Pal system protein TolB compare
MPMX20_04077 -5.4 -12.0 Argininosuccinate synthase compare
MPMX20_00225 -5.4 -12.0 Phosphoribosylamine--glycine ligase compare
MPMX20_03019 -5.3 -7.3 hypothetical protein compare
MPMX20_04532 -5.3 -4.8 Met repressor compare
MPMX20_04496 -5.2 -7.2 Ketol-acid reductoisomerase (NADP(+)) compare
MPMX20_04189 -5.2 -3.6 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_01950 -5.2 -3.6 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_01567 -5.2 -5.1 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_04279 -5.2 -3.6 Shikimate kinase 1 compare
MPMX20_01596 -5.2 -17.7 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_04442 -5.2 -7.9 Sec-independent protein translocase protein TatC compare
MPMX20_03003 -5.2 -12.0 Histidinol-phosphate aminotransferase compare
MPMX20_03212 -5.1 -5.0 NADH-quinone oxidoreductase subunit H compare
MPMX20_02494 -5.1 -7.8 Orotidine 5'-phosphate decarboxylase compare
MPMX20_04110 -5.1 -5.0 Nitrogen regulatory protein compare
MPMX20_03681 -5.1 -17.3 Amino-acid acetyltransferase compare
MPMX20_04140 -5.1 -9.2 Malate dehydrogenase compare
MPMX20_03001 -5.1 -14.0 ATP phosphoribosyltransferase compare
MPMX20_03018 -5.1 -3.5 hypothetical protein compare
MPMX20_01548 -5.1 -3.5 putative ABC transporter ATP-binding/permease protein compare
MPMX20_03007 -5.1 -9.7 Imidazole glycerol phosphate synthase subunit HisF compare
MPMX20_03002 -5.1 -14.6 Histidinol dehydrogenase compare
MPMX20_00711 -5.1 -14.6 Homoserine kinase compare
MPMX20_04523 -5.1 -9.7 Acetylornithine deacetylase compare
MPMX20_04306 -5.0 -8.4 Glycerol-3-phosphate regulon repressor compare
MPMX20_01351 -5.0 -4.9 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_00514 -5.0 -3.4 Fructose-1,6-bisphosphatase class 1 compare
MPMX20_01030 -5.0 -9.5 Lon protease compare
MPMX20_03207 -4.9 -5.9 NADH-quinone oxidoreductase subunit M compare
MPMX20_04522 -4.9 -9.5 N-acetyl-gamma-glutamyl-phosphate reductase compare
MPMX20_00739 -4.9 -4.8 Carbamoyl-phosphate synthase small chain compare
MPMX20_01607 -4.9 -5.8 Outer membrane protein A compare
MPMX20_03206 -4.9 -8.2 NADH-quinone oxidoreductase subunit N compare
MPMX20_00740 -4.9 -11.8 Carbamoyl-phosphate synthase large chain compare
MPMX20_01361 -4.9 -7.5 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_03216 -4.9 -12.5 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_01741 -4.9 -6.6 Dihydroorotase compare
MPMX20_01352 -4.8 -11.3 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_01703 -4.8 -15.8 Sodium/proline symporter conserved
MPMX20_00745 -4.8 -5.7 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_03208 -4.8 -7.3 NADH-quinone oxidoreductase subunit L compare
MPMX20_01702 -4.8 -22.7 Bifunctional protein PutA conserved
MPMX20_00093 -4.8 -7.4 Orotate phosphoribosyltransferase compare
MPMX20_03154 -4.8 -12.5 Inner membrane protein YejM compare
MPMX20_00110 -4.8 -19.1 hypothetical protein compare
MPMX20_04484 -4.8 -12.7 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
MPMX20_01350 -4.7 -7.2 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_00419 -4.7 -12.5 Aspartate ammonia-lyase compare
MPMX20_03210 -4.7 -7.1 NADH-quinone oxidoreductase subunit J compare
MPMX20_04278 -4.7 -3.2 3-dehydroquinate synthase compare
MPMX20_04489 -4.6 -17.3 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_01549 -4.6 -3.2 ATP-binding/permease protein CydD compare
MPMX20_00556 -4.6 -12.3 Ornithine carbamoyltransferase subunit F compare
MPMX20_03591 -4.6 -9.8 Glucitol operon repressor compare
MPMX20_01901 -4.6 -3.2 Integration host factor subunit alpha compare
MPMX20_03213 -4.6 -11.5 NADH-quinone oxidoreductase subunit G compare
MPMX20_03004 -4.6 -12.8 Histidine biosynthesis bifunctional protein HisB compare
MPMX20_03013 -4.6 -4.4 dTDP-glucose 4,6-dehydratase compare
MPMX20_04162 -4.6 -5.4 3-dehydroquinate dehydratase compare
MPMX20_03020 -4.6 -9.7 hypothetical protein compare
MPMX20_00710 -4.5 -16.8 Bifunctional aspartokinase/homoserine dehydrogenase 1 compare
MPMX20_03742 -4.5 -11.3 HTH-type transcriptional regulator GalR compare
MPMX20_00109 -4.5 -24.2 hypothetical protein compare
MPMX20_04038 -4.5 -8.1 Glucitol operon repressor compare
MPMX20_03218 -4.5 -5.6 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_04521 -4.5 -9.9 Acetylglutamate kinase compare
MPMX20_02574 -4.4 -3.0 putative intracellular septation protein A compare
MPMX20_02063 -4.4 -13.8 Protein mlc compare
MPMX20_03217 -4.4 -6.7 NADH-quinone oxidoreductase subunit B compare
MPMX20_00544 -4.4 -10.6 Aspartate carbamoyltransferase catalytic subunit compare
MPMX20_02593 -4.4 -21.5 Regulator of RpoS compare
MPMX20_04497 -4.3 -8.9 HTH-type transcriptional regulator GltC compare
MPMX20_02098 -4.3 -11.8 HTH-type transcriptional repressor RspR compare
MPMX20_03012 -4.3 -11.1 Glucose-1-phosphate thymidylyltransferase 1 compare
MPMX20_02701 -4.3 -3.0 Fatty acid metabolism regulator protein compare
MPMX20_04469 -4.3 -4.2 Adenylate cyclase compare
MPMX20_03075 -4.3 -9.1 HTH-type transcriptional repressor NagR compare
MPMX20_03466 -4.3 -13.9 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX20_00241 -4.2 -12.5 Glucose-6-phosphate isomerase compare
MPMX20_00106 -4.2 -2.9 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_02672 -4.2 -24.8 hypothetical protein compare
MPMX20_01356 -4.2 -10.7 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_03215 -4.2 -4.8 NADH-quinone oxidoreductase subunit E compare
MPMX20_01322 -4.2 -12.2 N-acetylglucosamine repressor compare
MPMX20_04482 -4.2 -13.3 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase compare
MPMX20_04197 -4.1 -2.8 Trk system potassium uptake protein TrkA compare
MPMX20_03247 -4.1 -11.4 Amidophosphoribosyltransferase compare
MPMX20_00102 -4.1 -2.8 hypothetical protein compare
MPMX20_00230 -4.1 -10.2 Homoserine O-succinyltransferase compare
MPMX20_03010 -4.1 -2.8 UDP-glucose 4-epimerase compare
MPMX20_01353 -4.1 -8.5 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_01334 -4.1 -12.4 Phosphoglucomutase compare
MPMX20_04443 -4.0 -4.2 Sec-independent protein translocase protein TatB compare
MPMX20_01362 -4.0 -7.2 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_02734 -4.0 -13.3 Transcriptional regulator KdgR compare
MPMX20_03852 -4.0 -16.6 Cystathionine beta-lyase MetC compare
MPMX20_04483 -4.0 -2.8 Lipid III flippase compare
MPMX20_01028 -4.0 -2.7 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_02512 -4.0 -13.6 Tryptophan biosynthesis protein TrpCF compare
MPMX20_02475 -4.0 -4.7 Putrescine export system permease protein SapB compare
MPMX20_03022 -4.0 -2.7 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_00105 -4.0 -15.9 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_03310 -3.9 -5.4 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_04119 -3.9 -2.7 DNA polymerase III subunit chi compare
MPMX20_04626 -3.9 -3.8 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_03021 -3.9 -8.3 hypothetical protein compare
MPMX20_01156 -3.9 -6.3 hypothetical protein compare
MPMX20_03214 -3.8 -11.2 NADH-quinone oxidoreductase subunit F compare
MPMX20_00133 -3.8 -8.5 Mannitol operon repressor compare
MPMX20_00767 -3.8 -11.8 3-isopropylmalate dehydratase large subunit 1 compare
MPMX20_03308 -3.7 -7.8 Cysteine synthase A compare
MPMX20_02477 -3.6 -3.5 Peptide transport system ATP-binding protein SapD compare
MPMX20_04595 -3.6 -2.5 Glutamine synthetase compare
MPMX20_01029 -3.6 -5.0 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_02511 -3.6 -14.4 Bifunctional protein TrpGD compare
MPMX20_02478 -3.6 -7.9 Putrescine export system ATP-binding protein SapF compare
MPMX20_02476 -3.6 -3.4 Putrescine export system permease protein SapC compare
MPMX20_01355 -3.6 -1.9 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_04275 -3.6 -3.4 Ribulose-phosphate 3-epimerase compare
MPMX20_00766 -3.5 -7.7 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_02513 -3.5 -15.0 Tryptophan synthase beta chain compare
MPMX20_03008 -3.5 -7.0 Histidine biosynthesis bifunctional protein HisIE compare
MPMX20_00086 -3.5 -4.2 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_03683 -3.5 -2.4 RecBCD enzyme subunit RecB compare
MPMX20_00768 -3.5 -14.3 3-isopropylmalate dehydrogenase compare
MPMX20_03685 -3.4 -3.3 RecBCD enzyme subunit RecC compare
MPMX20_03233 -3.4 -14.7 HTH-type transcriptional regulator GntR compare
MPMX20_03382 -3.4 -2.3 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_04444 -3.4 -2.1 Sec-independent protein translocase protein TatA compare
MPMX20_04079 -3.4 -3.5 Protein-export membrane protein SecG compare
MPMX20_02510 -3.4 -13.2 Anthranilate synthase component 1 compare
MPMX20_04498 -3.3 -11.8 L-threonine dehydratase biosynthetic IlvA compare
MPMX20_03490 -3.3 -5.6 SsrA-binding protein compare
MPMX20_04480 -3.3 -9.8 UDP-N-acetyl-D-mannosaminuronic acid transferase compare
MPMX20_04642 -3.2 -3.1 Phosphate import ATP-binding protein PstB compare
MPMX20_00455 -3.2 -10.9 Modulator of FtsH protease HflK compare
MPMX20_01550 -3.2 -3.7 Thioredoxin reductase compare
MPMX20_02768 -3.2 -4.5 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_00087 -3.2 -4.5 DNA-directed RNA polymerase subunit omega compare
MPMX20_04640 -3.2 -4.3 Phosphate transport system permease protein PstC compare
MPMX20_04530 -3.1 -11.0 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_04003 -3.1 -7.6 Putative L-lactate dehydrogenase operon regulatory protein compare
MPMX20_04650 -3.1 -5.6 tRNA modification GTPase MnmE compare
MPMX20_02766 -3.1 -5.2 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_02514 -3.0 -4.9 Tryptophan synthase alpha chain compare
MPMX20_03005 -3.0 -9.1 Imidazole glycerol phosphate synthase subunit HisH compare
MPMX20_03017 -3.0 -13.4 hypothetical protein compare
MPMX20_04433 -3.0 -17.3 Trk system potassium uptake protein TrkH compare
MPMX20_01020 -3.0 -2.2 Cytochrome bo(3) ubiquinol oxidase subunit 4 compare
MPMX20_04440 -3.0 -2.6 Transcription antitermination protein RfaH compare
MPMX20_03641 -3.0 -9.9 Phosphoadenosine phosphosulfate reductase compare
MPMX20_01552 -3.0 -4.5 hypothetical protein compare
MPMX20_00181 -3.0 -12.3 HTH-type transcriptional regulator KdgR compare
MPMX20_04768 -3.0 -7.2 hypothetical protein compare
MPMX20_02826 -2.9 -3.2 Cold shock-like protein CspB compare
MPMX20_03090 -2.9 -1.8 Methionine--tRNA ligase compare
MPMX20_01734 -2.9 -10.9 Lipid A biosynthesis lauroyltransferase compare
MPMX20_03705 -2.9 -10.7 Diaminopimelate decarboxylase compare
MPMX20_00722 -2.8 -8.4 Na(+)/H(+) antiporter NhaA compare
MPMX20_00108 -2.8 -17.5 hypothetical protein compare
MPMX20_00453 -2.8 -2.3 RNA-binding protein Hfq compare
MPMX20_04194 -2.8 -2.8 Peptide deformylase compare
MPMX20_00769 -2.8 -12.2 2-isopropylmalate synthase compare
MPMX20_01586 -2.8 -9.8 Aspartate aminotransferase compare
MPMX20_02635 -2.7 -3.9 Release factor glutamine methyltransferase compare
MPMX20_00456 -2.7 -7.7 Modulator of FtsH protease HflC compare
MPMX20_02696 -2.7 -8.7 Murein tetrapeptide carboxypeptidase compare


Specific Phenotypes

For 23 genes in this experiment

For carbon source L-Proline in Enterobacter sp. TBS_079

For carbon source L-Proline across organisms