Experiment set9S340 for Enterobacter sp. TBS_079

Compare to:

L-Aspartic Acid carbon source

200 most detrimental genes:

  gene name fitness t score description  
MPMX20_03627 +6.2 29.0 RNA polymerase sigma factor RpoS compare
MPMX20_04614 +6.1 35.5 Ribose operon repressor compare
MPMX20_04615 +5.5 34.0 Ribokinase compare
MPMX20_03412 +3.9 12.7 HTH-type transcriptional regulator IscR compare
MPMX20_02729 +3.9 24.3 Cold shock-like protein CspC compare
MPMX20_00908 +3.0 17.3 Glutathione hydrolase-like YwrD proenzyme compare
MPMX20_04112 +2.6 7.7 Phosphocarrier protein NPr compare
MPMX20_02738 +2.6 15.8 RNA chaperone ProQ compare
MPMX20_00223 +2.4 8.7 DNA-binding protein HU-alpha compare
MPMX20_01031 +2.4 4.7 DNA-binding protein HU-beta compare
MPMX20_03417 +2.4 17.9 hypothetical protein compare
MPMX20_00262 +2.4 5.9 Zinc uptake regulation protein compare
MPMX20_02487 +2.3 15.7 Exoribonuclease 2 compare
MPMX20_02697 +2.3 15.8 K(+)/H(+) antiporter NhaP2 compare
MPMX20_03879 +2.2 12.6 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA compare
MPMX20_00925 +2.2 15.0 Sigma factor-binding protein Crl compare
MPMX20_00708 +2.2 8.1 Aerobic respiration control protein ArcA compare
MPMX20_04729 +1.9 14.3 Nucleoid occlusion protein compare
MPMX20_03628 +1.9 6.3 Murein hydrolase activator NlpD compare
MPMX20_00309 +1.4 12.3 HTH-type transcriptional regulator RpiR compare
MPMX20_00494 +1.4 2.3 hypothetical protein compare
MPMX20_01342 +1.4 5.2 hypothetical protein compare
MPMX20_01398 +1.3 7.4 HTH-type transcriptional repressor NagR compare
MPMX20_04066 +1.2 1.6 ATP-dependent RNA helicase DeaD compare
MPMX20_03309 +1.2 1.9 Phosphocarrier protein HPr compare
MPMX20_00902 +1.2 2.8 Glc operon transcriptional activator compare
MPMX20_03655 +1.1 8.7 Signal transduction histidine-protein kinase BarA compare
MPMX20_00555 +1.0 7.6 HTH-type transcriptional regulator XynR compare
MPMX20_02659 +1.0 5.7 Serine/threonine-protein kinase PknD compare
MPMX20_00388 +1.0 1.3 hypothetical protein compare
MPMX20_04492 +1.0 4.3 ATP-dependent RNA helicase RhlB compare
MPMX20_03341 +1.0 5.0 Glycine cleavage system transcriptional repressor compare
MPMX20_00465 +1.0 5.1 hypothetical protein compare
MPMX20_03071 +1.0 5.6 Fructose-bisphosphate aldolase class 1 compare
MPMX20_01266 +1.0 1.9 Acireductone dioxygenase compare
MPMX20_00764 +0.9 1.1 hypothetical protein compare
MPMX20_00213 +0.9 2.2 Thiazole synthase compare
MPMX20_04616 +0.9 1.8 Ribose import binding protein RbsB compare
MPMX20_02665 +0.9 3.4 hypothetical protein compare
MPMX20_03692 +0.9 6.4 Phosphoenolpyruvate-dependent phosphotransferase system compare
MPMX20_03176 +0.9 6.0 Phosphotransferase RcsD compare
MPMX20_03804 +0.9 4.4 Ribosomal RNA small subunit methyltransferase E compare
MPMX20_00091 +0.9 4.5 hypothetical protein compare
MPMX20_00197 +0.9 1.5 tRNA-Tyr compare
MPMX20_02633 +0.9 3.0 hypothetical protein compare
MPMX20_01775 +0.8 3.4 3-oxoacyl-[acyl-carrier-protein] synthase 2 compare
MPMX20_02682 +0.8 4.4 hypothetical protein compare
MPMX20_01665 +0.8 3.5 hypothetical protein compare
MPMX20_02916 +0.8 1.9 hypothetical protein compare
MPMX20_03177 +0.8 3.1 Transcriptional regulatory protein RcsB compare
MPMX20_04133 +0.8 2.5 Stringent starvation protein A compare
MPMX20_00466 +0.7 4.0 Lipoprotein BsmA compare
MPMX20_01695 +0.7 2.5 putative malonic semialdehyde reductase RutE compare
MPMX20_01795 +0.7 5.8 Transcription-repair-coupling factor compare
MPMX20_03323 +0.7 2.2 Oxygen-dependent coproporphyrinogen-III oxidase compare
MPMX20_02926 +0.7 1.6 hypothetical protein compare
MPMX20_02928 +0.7 1.4 hypothetical protein compare
MPMX20_02839 +0.7 5.0 Response regulator UvrY compare
MPMX20_01230 +0.7 3.1 HTH-type transcriptional regulator BetI compare
MPMX20_04394 +0.7 2.4 Universal stress protein B compare
MPMX20_02879 +0.7 1.8 hypothetical protein compare
MPMX20_01288 +0.7 6.2 putative HTH-type transcriptional regulator YbdO compare
MPMX20_00825 +0.7 0.8 Aspartate 1-decarboxylase compare
MPMX20_02765 +0.7 2.4 High-affinity zinc uptake system membrane protein ZnuB compare
MPMX20_02919 +0.7 2.5 hypothetical protein compare
MPMX20_04422 +0.7 2.9 hypothetical protein compare
MPMX20_00218 +0.7 4.7 Regulator of sigma D compare
MPMX20_00695 +0.7 4.5 Trifunctional NAD biosynthesis/regulator protein NadR compare
MPMX20_03985 +0.7 2.9 4-hydroxy-tetrahydrodipicolinate synthase compare
MPMX20_01998 +0.6 4.2 Anhydro-N-acetylmuramic acid kinase compare
MPMX20_00849 +0.6 3.4 hypothetical protein compare
MPMX20_01253 +0.6 2.3 Inner membrane protein YjiG compare
MPMX20_04455 +0.6 3.2 Lysophospholipase L2 compare
MPMX20_02518 +0.6 1.9 hypothetical protein compare
MPMX20_01284 +0.6 3.5 Putative fluoride ion transporter CrcB compare
MPMX20_01983 +0.6 3.0 Glutaredoxin 4 compare
MPMX20_03422 +0.6 1.4 Nitrogen regulatory protein P-II compare
MPMX20_04376 +0.6 3.8 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase compare
MPMX20_01434 +0.6 1.0 putative protein YbiI compare
MPMX20_03762 +0.6 4.1 Glycine dehydrogenase (decarboxylating) compare
MPMX20_00965 +0.6 4.5 Peptide antibiotic transporter SbmA compare
MPMX20_00829 +0.6 2.5 Poly(A) polymerase I compare
MPMX20_03826 +0.6 2.5 Citrate lyase acyl carrier protein compare
MPMX20_03278 +0.6 1.2 hypothetical protein compare
MPMX20_04517 +0.6 2.7 HTH-type transcriptional repressor FabR compare
MPMX20_00266 +0.6 1.8 Phage shock protein G compare
MPMX20_02875 +0.6 3.1 hypothetical protein compare
MPMX20_03653 +0.6 3.5 GTP pyrophosphokinase compare
MPMX20_00675 +0.6 2.0 hypothetical protein compare
MPMX20_00880 +0.6 2.6 Outer membrane lipoprotein RcsF compare
MPMX20_02840 +0.6 3.9 hypothetical protein compare
MPMX20_04170 +0.5 1.1 DNA-binding protein Fis compare
MPMX20_04300 +0.5 1.9 Putative ribose-phosphate pyrophosphokinase compare
MPMX20_00022 +0.5 2.2 Inner membrane protein YidG compare
MPMX20_04418 +0.5 3.4 Cellulose synthase catalytic subunit [UDP-forming] compare
MPMX20_03442 +0.5 1.6 Sigma-E factor regulatory protein RseB compare
MPMX20_00972 +0.5 4.2 Anti-adapter protein IraP compare
MPMX20_02950 +0.5 2.5 hypothetical protein compare
MPMX20_02877 +0.5 2.0 hypothetical protein compare
MPMX20_01605 +0.5 2.2 Lon protease compare
MPMX20_00897 +0.5 1.9 Hydroxyacylglutathione hydrolase GloB compare
MPMX20_03850 +0.5 1.8 Biopolymer transport protein ExbD compare
MPMX20_03136 +0.5 2.5 Elongation factor P-like protein compare
MPMX20_00995 +0.5 2.0 Acyl carrier protein phosphodiesterase compare
MPMX20_03202 +0.5 1.8 Protein ElaB compare
MPMX20_01751 +0.5 2.0 Flagella basal body P-ring formation protein FlgA compare
MPMX20_00476 +0.5 2.6 hypothetical protein compare
MPMX20_02394 +0.5 2.4 Tautomerase PptA compare
MPMX20_02906 +0.5 1.8 hypothetical protein compare
MPMX20_00191 +0.5 1.8 Dipeptide transport system permease protein DppB compare
MPMX20_03195 +0.5 3.0 hypothetical protein compare
MPMX20_04420 +0.5 4.2 Protein YhjR compare
MPMX20_03763 +0.5 1.7 Glycine cleavage system H protein compare
MPMX20_01283 +0.5 1.1 Cold shock-like protein CspE compare
MPMX20_01106 +0.5 1.0 putative protein YbcJ compare
MPMX20_04099 +0.5 2.2 Intermembrane phospholipid transport system binding protein MlaD compare
MPMX20_00810 +0.5 1.6 hypothetical protein compare
MPMX20_04621 +0.5 3.3 ATPase RavA compare
MPMX20_02561 +0.5 3.4 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase LinX compare
MPMX20_02421 +0.5 2.6 Inner membrane ABC transporter permease protein YdcV compare
MPMX20_02888 +0.5 3.4 hypothetical protein compare
MPMX20_04575 +0.5 2.2 Formate dehydrogenase-O major subunit compare
MPMX20_02275 +0.5 1.2 Acetyltransferase compare
MPMX20_01595 +0.5 2.5 FMN reductase (NADPH) compare
MPMX20_04009 +0.5 1.9 hypothetical protein compare
MPMX20_01244 +0.5 2.5 Ferric enterobactin transport system permease protein FepD compare
MPMX20_03131 +0.5 2.8 PTS system fructose-specific EIIB'BC component compare
MPMX20_04740 +0.5 2.4 SOS response-associated protein YedK compare
MPMX20_04558 +0.5 1.0 Protein YiiM compare
MPMX20_00793 +0.5 1.0 DNA gyrase inhibitor YacG compare
MPMX20_02894 +0.5 1.6 hypothetical protein compare
MPMX20_04040 +0.5 1.3 PTS system fructose-specific EIIB component compare
MPMX20_03041 +0.5 2.7 hypothetical protein compare
MPMX20_02871 +0.5 1.8 hypothetical protein compare
MPMX20_00669 +0.5 2.7 Ribosomal RNA small subunit methyltransferase C compare
MPMX20_04516 +0.5 2.3 Inner membrane protein YijD compare
MPMX20_04114 +0.5 1.8 Glyoxalase ElbB compare
MPMX20_01414 +0.5 2.0 Molybdopterin synthase catalytic subunit compare
MPMX20_00681 +0.5 2.7 Thymidine phosphorylase compare
MPMX20_04670 +0.5 0.7 hypothetical protein compare
MPMX20_03774 +0.5 2.0 26 kDa periplasmic immunogenic protein compare
MPMX20_04706 +0.5 1.0 hypothetical protein compare
MPMX20_04739 +0.5 1.8 DNA adenine methyltransferase YhdJ compare
MPMX20_02930 +0.4 1.9 hypothetical protein compare
MPMX20_04622 +0.4 2.8 Protein ViaA compare
MPMX20_00452 +0.4 1.8 tRNA dimethylallyltransferase compare
MPMX20_02878 +0.4 1.7 hypothetical protein compare
MPMX20_01273 +0.4 1.7 Universal stress protein UP12 compare
MPMX20_01034 +0.4 1.7 Long-chain acyl-CoA thioesterase FadM compare
MPMX20_02874 +0.4 3.4 hypothetical protein compare
MPMX20_02661 +0.4 2.4 hypothetical protein compare
MPMX20_02077 +0.4 2.8 hypothetical protein compare
MPMX20_01620 +0.4 1.3 Acylphosphatase compare
MPMX20_04169 +0.4 2.0 tRNA-dihydrouridine synthase B compare
MPMX20_00390 +0.4 1.8 hypothetical protein compare
MPMX20_01745 +0.4 1.2 hypothetical protein compare
MPMX20_02326 +0.4 1.3 hypothetical protein compare
MPMX20_03187 +0.4 2.5 Anaerobic glycerol-3-phosphate dehydrogenase subunit B compare
MPMX20_03819 +0.4 1.9 putative Fe(2+)-trafficking protein compare
MPMX20_01786 +0.4 2.2 Penicillin-binding protein activator LpoB compare
MPMX20_03764 +0.4 2.6 Aminomethyltransferase compare
MPMX20_02411 +0.4 1.3 hypothetical protein compare
MPMX20_03287 +0.4 2.6 Nucleoside permease NupC compare
MPMX20_02882 +0.4 2.4 hypothetical protein compare
MPMX20_03802 +0.4 2.5 Protein SprT compare
MPMX20_03880 +0.4 1.7 hypothetical protein compare
MPMX20_02667 +0.4 2.7 hypothetical protein compare
MPMX20_00728 +0.4 0.3 FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase compare
MPMX20_03779 +0.4 2.2 D-erythrose-4-phosphate dehydrogenase compare
MPMX20_01413 +0.4 1.3 Molybdopterin synthase sulfur carrier subunit compare
MPMX20_03403 +0.4 2.0 hypothetical protein compare
MPMX20_04052 +0.4 1.5 hypothetical protein compare
MPMX20_03768 +0.4 2.1 hypothetical protein compare
MPMX20_03321 +0.4 1.7 Acetyltransferase YpeA compare
MPMX20_02764 +0.4 1.9 Zinc import ATP-binding protein ZnuC compare
MPMX20_04462 +0.4 1.7 Magnesium transport protein CorA compare
MPMX20_02722 +0.4 2.5 PTS system mannose-specific EIIAB component compare
MPMX20_03186 +0.4 2.5 Anaerobic glycerol-3-phosphate dehydrogenase subunit A compare
MPMX20_01069 +0.4 1.7 Primosomal replication protein N'' compare
MPMX20_03237 +0.4 2.0 Disulfide-bond oxidoreductase YfcG compare
MPMX20_04505 +0.4 2.4 HTH-type transcriptional regulator HdfR compare
MPMX20_00343 +0.4 2.3 hypothetical protein compare
MPMX20_02182 +0.4 1.9 hypothetical protein compare
MPMX20_02995 +0.4 1.8 DNA gyrase inhibitor compare
MPMX20_03532 +0.4 1.6 hypothetical protein compare
MPMX20_01149 +0.4 1.9 Potassium binding protein Kbp compare
MPMX20_02253 +0.4 2.0 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX20_02953 +0.4 1.6 hypothetical protein compare
MPMX20_00038 +0.4 1.2 hypothetical protein compare
MPMX20_03290 +0.4 0.3 tRNA-Ala compare
MPMX20_03969 +0.4 1.1 hypothetical protein compare
MPMX20_02927 +0.4 1.4 hypothetical protein compare
MPMX20_00030 +0.4 0.9 hypothetical protein compare
MPMX20_02412 +0.4 2.1 L-amino acid N-acyltransferase MnaT compare
MPMX20_02044 +0.4 2.1 Protein UmuD compare
MPMX20_02038 +0.4 2.1 p-aminobenzoyl-glutamate hydrolase subunit B compare
MPMX20_02469 +0.4 1.5 Phage shock protein D compare
MPMX20_02050 +0.4 1.8 hypothetical protein compare
MPMX20_02132 +0.4 2.1 D-lactate dehydrogenase compare
MPMX20_04449 +0.4 2.2 Uridine phosphorylase compare


Specific Phenotypes

For 10 genes in this experiment

For carbon source L-Aspartic Acid in Enterobacter sp. TBS_079

For carbon source L-Aspartic Acid across organisms