Experiment set9S332 for Enterobacter sp. TBS_079

Compare to:

D,L-Malic Acid carbon source

200 most important genes:

  gene name fitness t score description  
MPMX20_01566 -6.7 -11.2 Phosphoserine aminotransferase compare
MPMX20_00693 -6.6 -4.6 Phosphoserine phosphatase compare
MPMX20_03771 -6.2 -10.4 D-3-phosphoglycerate dehydrogenase compare
MPMX20_01368 -6.1 -4.2 hypothetical protein compare
MPMX20_00544 -5.9 -4.1 Aspartate carbamoyltransferase catalytic subunit compare
MPMX20_04521 -5.8 -4.0 Acetylglutamate kinase compare
MPMX20_03354 -5.7 -11.4 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_04442 -5.7 -4.0 Sec-independent protein translocase protein TatC compare
MPMX20_04077 -5.5 -9.3 Argininosuccinate synthase compare
MPMX20_00225 -5.5 -9.9 Phosphoribosylamine--glycine ligase compare
MPMX20_01097 -5.5 -5.3 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_03002 -5.5 -12.2 Histidinol dehydrogenase compare
MPMX20_01370 -5.5 -6.2 Peptidoglycan-associated lipoprotein compare
MPMX20_01369 -5.4 -9.1 Tol-Pal system protein TolB compare
MPMX20_04443 -5.4 -3.4 Sec-independent protein translocase protein TatB compare
MPMX20_00928 -5.4 -10.4 Gamma-glutamyl phosphate reductase compare
MPMX20_01367 -5.4 -6.4 Tol-Pal system protein TolR compare
MPMX20_03264 -5.3 -5.1 Chorismate synthase compare
MPMX20_04522 -5.3 -5.1 N-acetyl-gamma-glutamyl-phosphate reductase compare
MPMX20_03468 -5.2 -7.2 T-protein compare
MPMX20_01366 -5.2 -5.9 Tol-Pal system protein TolQ compare
MPMX20_01349 -5.2 -3.6 Citrate synthase compare
MPMX20_04523 -5.1 -7.9 Acetylornithine deacetylase compare
MPMX20_00230 -5.1 -8.6 Homoserine O-succinyltransferase compare
MPMX20_03986 -5.0 -4.2 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_00712 -5.0 -12.5 Threonine synthase compare
MPMX20_00773 -4.9 -13.8 Catabolite repressor/activator compare
MPMX20_03426 -4.9 -16.8 Phosphoribosylformylglycinamidine synthase compare
MPMX20_00711 -4.9 -13.3 Homoserine kinase compare
MPMX20_00927 -4.8 -15.5 Glutamate 5-kinase compare
MPMX20_01361 -4.8 -4.7 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_00740 -4.8 -9.2 Carbamoyl-phosphate synthase large chain compare
MPMX20_03006 -4.8 -8.9 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX20_00556 -4.8 -10.3 Ornithine carbamoyltransferase subunit F compare
MPMX20_04162 -4.7 -3.3 3-dehydroquinate dehydratase compare
MPMX20_01596 -4.7 -18.0 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_01548 -4.7 -3.2 putative ABC transporter ATP-binding/permease protein compare
MPMX20_03018 -4.7 -3.2 hypothetical protein compare
MPMX20_00226 -4.7 -11.2 Bifunctional purine biosynthesis protein PurH compare
MPMX20_04520 -4.6 -8.9 Argininosuccinate lyase compare
MPMX20_02494 -4.6 -8.3 Orotidine 5'-phosphate decarboxylase compare
MPMX20_04499 -4.6 -14.8 Dihydroxy-acid dehydratase compare
MPMX20_00831 -4.6 -5.6 RNA polymerase-binding transcription factor DksA compare
MPMX20_00514 -4.5 -3.1 Fructose-1,6-bisphosphatase class 1 compare
MPMX20_01354 -4.5 -3.5 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_03338 -4.5 -7.3 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_00710 -4.4 -16.7 Bifunctional aspartokinase/homoserine dehydrogenase 1 compare
MPMX20_01567 -4.4 -6.7 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_04496 -4.4 -7.9 Ketol-acid reductoisomerase (NADP(+)) compare
MPMX20_02514 -4.3 -6.3 Tryptophan synthase alpha chain compare
MPMX20_03019 -4.3 -16.2 hypothetical protein compare
MPMX20_00388 -4.2 -1.1 hypothetical protein compare
MPMX20_01901 -4.2 -2.4 Integration host factor subunit alpha compare
MPMX20_03247 -4.2 -7.5 Amidophosphoribosyltransferase compare
MPMX20_03003 -4.2 -12.2 Histidinol-phosphate aminotransferase compare
MPMX20_04189 -4.1 -5.7 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_00976 -4.1 -4.9 Pyrroline-5-carboxylate reductase compare
MPMX20_04279 -4.1 -3.8 Shikimate kinase 1 compare
MPMX20_01950 -4.1 -4.0 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_00739 -4.1 -5.6 Carbamoyl-phosphate synthase small chain compare
MPMX20_03007 -4.1 -8.3 Imidazole glycerol phosphate synthase subunit HisF compare
MPMX20_03004 -4.1 -9.4 Histidine biosynthesis bifunctional protein HisB compare
MPMX20_00093 -4.1 -8.3 Orotate phosphoribosyltransferase compare
MPMX20_01549 -4.1 -2.8 ATP-binding/permease protein CydD compare
MPMX20_03681 -4.0 -13.6 Amino-acid acetyltransferase compare
MPMX20_03001 -4.0 -11.3 ATP phosphoribosyltransferase compare
MPMX20_01741 -4.0 -6.1 Dihydroorotase compare
MPMX20_04278 -4.0 -3.9 3-dehydroquinate synthase compare
MPMX20_01607 -4.0 -6.0 Outer membrane protein A compare
MPMX20_00766 -3.9 -6.8 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_01362 -3.9 -5.9 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_01098 -3.8 -4.4 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_04531 -3.8 -10.8 Cystathionine gamma-synthase compare
MPMX20_03008 -3.8 -6.2 Histidine biosynthesis bifunctional protein HisIE compare
MPMX20_03209 -3.8 -3.2 NADH-quinone oxidoreductase subunit K compare
MPMX20_02513 -3.7 -11.1 Tryptophan synthase beta chain compare
MPMX20_04768 -3.7 -15.3 hypothetical protein compare
MPMX20_01029 -3.7 -2.6 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_01334 -3.7 -9.8 Phosphoglucomutase compare
MPMX20_03211 -3.7 -5.1 NADH-quinone oxidoreductase subunit I compare
MPMX20_03010 -3.6 -2.5 UDP-glucose 4-epimerase compare
MPMX20_04497 -3.6 -8.0 HTH-type transcriptional regulator GltC compare
MPMX20_00102 -3.6 -2.5 hypothetical protein compare
MPMX20_01028 -3.6 -2.5 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_00768 -3.6 -11.6 3-isopropylmalate dehydrogenase compare
MPMX20_04440 -3.6 -1.8 Transcription antitermination protein RfaH compare
MPMX20_03021 -3.5 -7.2 hypothetical protein compare
MPMX20_03022 -3.5 -2.4 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_04483 -3.5 -2.4 Lipid III flippase compare
MPMX20_04275 -3.5 -2.4 Ribulose-phosphate 3-epimerase compare
MPMX20_01030 -3.5 -11.5 Lon protease compare
MPMX20_04119 -3.4 -2.3 DNA polymerase III subunit chi compare
MPMX20_00110 -3.4 -17.8 hypothetical protein compare
MPMX20_00106 -3.4 -5.1 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_03005 -3.3 -6.9 Imidazole glycerol phosphate synthase subunit HisH compare
MPMX20_00109 -3.3 -19.5 hypothetical protein compare
MPMX20_03215 -3.3 -4.3 NADH-quinone oxidoreductase subunit E compare
MPMX20_00197 -3.3 -2.1 tRNA-Tyr compare
MPMX20_00998 -3.2 -3.3 Sec translocon accessory complex subunit YajC compare
MPMX20_04626 -3.2 -3.8 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_02574 -3.2 -4.5 putative intracellular septation protein A compare
MPMX20_04498 -3.2 -7.3 L-threonine dehydratase biosynthetic IlvA compare
MPMX20_00767 -3.1 -9.4 3-isopropylmalate dehydratase large subunit 1 compare
MPMX20_04197 -3.1 -4.8 Trk system potassium uptake protein TrkA compare
MPMX20_04595 -3.1 -2.1 Glutamine synthetase compare
MPMX20_03218 -3.1 -3.9 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_03382 -3.1 -2.1 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_03163 -3.1 -1.6 hypothetical protein compare
MPMX20_04469 -3.0 -4.8 Adenylate cyclase compare
MPMX20_03310 -3.0 -6.0 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_02477 -3.0 -4.0 Peptide transport system ATP-binding protein SapD compare
MPMX20_03013 -3.0 -12.0 dTDP-glucose 4,6-dehydratase compare
MPMX20_04140 -3.0 -9.8 Malate dehydrogenase compare
MPMX20_03012 -3.0 -12.7 Glucose-1-phosphate thymidylyltransferase 1 compare
MPMX20_00441 -2.9 -1.0 Phosphatidylserine decarboxylase proenzyme compare
MPMX20_03090 -2.9 -1.5 Methionine--tRNA ligase compare
MPMX20_02512 -2.9 -8.0 Tryptophan biosynthesis protein TrpCF compare
MPMX20_03490 -2.9 -5.4 SsrA-binding protein compare
MPMX20_03685 -2.9 -3.4 RecBCD enzyme subunit RecC compare
MPMX20_02511 -2.9 -9.9 Bifunctional protein TrpGD compare
MPMX20_01552 -2.9 -3.4 hypothetical protein compare
MPMX20_03285 -2.8 -1.3 hypothetical protein compare
MPMX20_00105 -2.8 -10.9 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_02591 -2.8 -6.7 DNA-binding protein H-NS compare
MPMX20_03466 -2.8 -6.4 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX20_03267 -2.7 -4.2 Phosphohistidine phosphatase SixA compare
MPMX20_04639 -2.7 -1.4 Phosphate-binding protein PstS compare
MPMX20_03852 -2.7 -10.1 Cystathionine beta-lyase MetC compare
MPMX20_00708 -2.7 -4.9 Aerobic respiration control protein ArcA compare
MPMX20_03216 -2.7 -10.2 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_03206 -2.7 -9.6 NADH-quinone oxidoreductase subunit N compare
MPMX20_03407 -2.7 -4.4 Chaperone protein HscA compare
MPMX20_00807 -2.7 -1.8 Pyruvate dehydrogenase E1 component compare
MPMX20_04650 -2.7 -5.1 tRNA modification GTPase MnmE compare
MPMX20_04530 -2.7 -9.2 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_03683 -2.7 -5.0 RecBCD enzyme subunit RecB compare
MPMX20_03207 -2.7 -6.9 NADH-quinone oxidoreductase subunit M compare
MPMX20_03214 -2.6 -9.7 NADH-quinone oxidoreductase subunit F compare
MPMX20_02476 -2.6 -3.5 Putrescine export system permease protein SapC compare
MPMX20_02593 -2.6 -14.3 Regulator of RpoS compare
MPMX20_02475 -2.6 -5.9 Putrescine export system permease protein SapB compare
MPMX20_02510 -2.6 -12.2 Anthranilate synthase component 1 compare
MPMX20_02766 -2.6 -3.9 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_00453 -2.6 -2.3 RNA-binding protein Hfq compare
MPMX20_03212 -2.5 -5.2 NADH-quinone oxidoreductase subunit H compare
MPMX20_03408 -2.5 -2.7 Co-chaperone protein HscB compare
MPMX20_02203 -2.5 -1.8 hypothetical protein compare
MPMX20_00086 -2.5 -4.0 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_01768 -2.4 -3.3 Large ribosomal RNA subunit accumulation protein YceD compare
MPMX20_01156 -2.4 -3.8 hypothetical protein compare
MPMX20_02478 -2.4 -8.2 Putrescine export system ATP-binding protein SapF compare
MPMX20_00241 -2.4 -9.0 Glucose-6-phosphate isomerase compare
MPMX20_01952 -2.4 -1.2 hypothetical protein compare
MPMX20_00108 -2.3 -13.5 hypothetical protein compare
MPMX20_04463 -2.3 -6.8 DNA helicase II compare
MPMX20_02825 -2.3 -3.4 Cold shock-like protein CspB compare
MPMX20_00812 -2.3 -7.8 Aconitate hydratase B compare
MPMX20_00899 -2.2 -1.6 Ribonuclease HI compare
MPMX20_03390 -2.2 -7.5 Outer membrane protein assembly factor BamB compare
MPMX20_04489 -2.2 -11.6 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_01734 -2.2 -7.1 Lipid A biosynthesis lauroyltransferase compare
MPMX20_04413 -2.2 -10.1 Aerobic C4-dicarboxylate transport protein conserved
MPMX20_03213 -2.2 -9.1 NADH-quinone oxidoreductase subunit G compare
MPMX20_04670 -2.2 -2.1 hypothetical protein compare
MPMX20_03469 -2.1 -6.2 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive compare
MPMX20_00213 -2.1 -2.4 Thiazole synthase compare
MPMX20_02646 -2.1 -2.0 hypothetical protein compare
MPMX20_04585 -2.1 -5.3 HTH-type transcriptional repressor CsqR compare
MPMX20_02549 -2.1 -4.0 hypothetical protein compare
MPMX20_02768 -2.0 -2.9 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_01286 -2.0 -1.3 Sec-independent protein translocase protein TatE compare
MPMX20_04276 -2.0 -5.2 DNA adenine methylase compare
MPMX20_03208 -2.0 -5.6 NADH-quinone oxidoreductase subunit L compare
MPMX20_02770 -2.0 -4.0 Dihydroneopterin triphosphate diphosphatase compare
MPMX20_01972 -1.9 -1.0 tRNA-Val compare
MPMX20_02946 -1.9 -3.3 Flagellar biosynthetic protein FliQ compare
MPMX20_00769 -1.9 -5.9 2-isopropylmalate synthase compare
MPMX20_01283 -1.9 -3.3 Cold shock-like protein CspE compare
MPMX20_01551 -1.9 -4.6 Leucine-responsive regulatory protein compare
MPMX20_00801 -1.9 -2.9 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
MPMX20_01942 -1.9 -5.2 HTH-type transcriptional repressor BluR compare
MPMX20_04385 -1.8 -5.9 hypothetical protein compare
MPMX20_01570 -1.8 -2.0 Integration host factor subunit beta compare
MPMX20_00721 -1.8 -2.6 Chaperone protein DnaJ compare
MPMX20_00537 -1.8 -7.6 Trehalose-6-phosphate hydrolase compare
MPMX20_04642 -1.7 -1.9 Phosphate import ATP-binding protein PstB compare
MPMX20_01757 -1.7 -5.8 Flagellar basal-body rod protein FlgG compare
MPMX20_03017 -1.7 -5.9 hypothetical protein compare
MPMX20_04003 -1.7 -3.9 Putative L-lactate dehydrogenase operon regulatory protein compare
MPMX20_00747 -1.7 -3.2 Ribosomal RNA small subunit methyltransferase A compare
MPMX20_02701 -1.7 -2.2 Fatty acid metabolism regulator protein compare
MPMX20_04301 -1.7 -1.9 Fe/S biogenesis protein NfuA compare
MPMX20_04170 -1.7 -1.6 DNA-binding protein Fis compare
MPMX20_00087 -1.7 -2.7 DNA-directed RNA polymerase subunit omega compare
MPMX20_02546 -1.7 -2.1 hypothetical protein compare
MPMX20_04038 -1.7 -3.8 Glucitol operon repressor compare
MPMX20_02769 -1.6 -1.7 putative transcriptional regulatory protein YebC compare
MPMX20_02635 -1.6 -2.1 Release factor glutamine methyltransferase compare
MPMX20_04664 -1.6 -3.6 hypothetical protein compare
MPMX20_02732 -1.6 -3.3 PhoP/PhoQ regulator MgrB compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source D,L-Malic Acid in Enterobacter sp. TBS_079

For carbon source D,L-Malic Acid across organisms