Experiment set9S330 for Enterobacter sp. TBS_079

Compare to:

Glycerol carbon source

200 most important genes:

  gene name fitness t score description  
MPMX20_03354 -6.4 -7.6 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_01566 -6.3 -10.6 Phosphoserine aminotransferase compare
MPMX20_00831 -6.2 -3.9 RNA polymerase-binding transcription factor DksA compare
MPMX20_03771 -6.2 -8.5 D-3-phosphoglycerate dehydrogenase compare
MPMX20_04499 -5.5 -10.0 Dihydroxy-acid dehydratase compare
MPMX20_04077 -5.5 -7.5 Argininosuccinate synthase compare
MPMX20_01370 -5.5 -4.5 Peptidoglycan-associated lipoprotein compare
MPMX20_03004 -5.4 -7.4 Histidine biosynthesis bifunctional protein HisB compare
MPMX20_03002 -5.4 -10.9 Histidinol dehydrogenase compare
MPMX20_01098 -5.4 -4.9 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_04520 -5.4 -5.2 Argininosuccinate lyase compare
MPMX20_00928 -5.4 -8.9 Gamma-glutamyl phosphate reductase compare
MPMX20_03264 -5.3 -3.7 Chorismate synthase compare
MPMX20_03681 -5.3 -13.8 Amino-acid acetyltransferase compare
MPMX20_03338 -5.3 -5.1 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_04521 -5.2 -6.2 Acetylglutamate kinase compare
MPMX20_00712 -5.2 -9.3 Threonine synthase compare
MPMX20_03247 -5.2 -7.1 Amidophosphoribosyltransferase compare
MPMX20_00226 -5.0 -7.7 Bifunctional purine biosynthesis protein PurH compare
MPMX20_01366 -5.0 -4.5 Tol-Pal system protein TolQ compare
MPMX20_00927 -5.0 -14.5 Glutamate 5-kinase compare
MPMX20_03006 -4.9 -8.2 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX20_03007 -4.9 -7.3 Imidazole glycerol phosphate synthase subunit HisF compare
MPMX20_03001 -4.9 -11.4 ATP phosphoribosyltransferase compare
MPMX20_03468 -4.9 -7.5 T-protein compare
MPMX20_00711 -4.9 -11.8 Homoserine kinase compare
MPMX20_00544 -4.9 -7.4 Aspartate carbamoyltransferase catalytic subunit compare
MPMX20_00740 -4.8 -7.4 Carbamoyl-phosphate synthase large chain compare
MPMX20_03426 -4.8 -15.6 Phosphoribosylformylglycinamidine synthase compare
MPMX20_01368 -4.7 -4.9 hypothetical protein compare
MPMX20_04524 -4.6 -14.6 Phosphoenolpyruvate carboxylase compare
MPMX20_00710 -4.6 -15.1 Bifunctional aspartokinase/homoserine dehydrogenase 1 compare
MPMX20_01369 -4.6 -10.3 Tol-Pal system protein TolB compare
MPMX20_04498 -4.5 -9.7 L-threonine dehydratase biosynthetic IlvA compare
MPMX20_02494 -4.5 -6.2 Orotidine 5'-phosphate decarboxylase compare
MPMX20_01567 -4.5 -4.4 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_04189 -4.5 -3.1 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_03852 -4.5 -14.6 Cystathionine beta-lyase MetC compare
MPMX20_03003 -4.5 -10.8 Histidinol-phosphate aminotransferase compare
MPMX20_04531 -4.5 -10.8 Cystathionine gamma-synthase compare
MPMX20_01596 -4.4 -15.8 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_01950 -4.4 -2.8 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_04497 -4.4 -9.2 HTH-type transcriptional regulator GltC compare
MPMX20_01741 -4.4 -4.3 Dihydroorotase compare
MPMX20_01097 -4.3 -7.2 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_04523 -4.3 -8.7 Acetylornithine deacetylase compare
MPMX20_00230 -4.3 -8.6 Homoserine O-succinyltransferase compare
MPMX20_01548 -4.3 -3.0 putative ABC transporter ATP-binding/permease protein compare
MPMX20_00225 -4.3 -12.0 Phosphoribosylamine--glycine ligase compare
MPMX20_04444 -4.3 -1.2 Sec-independent protein translocase protein TatA compare
MPMX20_01367 -4.2 -8.4 Tol-Pal system protein TolR compare
MPMX20_04522 -4.2 -8.6 N-acetyl-gamma-glutamyl-phosphate reductase compare
MPMX20_04496 -4.2 -6.4 Ketol-acid reductoisomerase (NADP(+)) compare
MPMX20_00976 -4.2 -2.7 Pyrroline-5-carboxylate reductase compare
MPMX20_00514 -4.2 -4.1 Fructose-1,6-bisphosphatase class 1 compare
MPMX20_00766 -4.1 -7.1 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_04162 -4.1 -4.0 3-dehydroquinate dehydratase compare
MPMX20_00739 -4.1 -4.8 Carbamoyl-phosphate synthase small chain compare
MPMX20_00693 -4.0 -6.7 Phosphoserine phosphatase compare
MPMX20_02514 -4.0 -5.6 Tryptophan synthase alpha chain compare
MPMX20_03986 -4.0 -4.0 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_04442 -4.0 -6.1 Sec-independent protein translocase protein TatC compare
MPMX20_00767 -4.0 -11.2 3-isopropylmalate dehydratase large subunit 1 compare
MPMX20_00241 -3.9 -11.1 Glucose-6-phosphate isomerase compare
MPMX20_00768 -3.9 -14.0 3-isopropylmalate dehydrogenase compare
MPMX20_00093 -3.9 -7.5 Orotate phosphoribosyltransferase compare
MPMX20_04278 -3.9 -2.7 3-dehydroquinate synthase compare
MPMX20_02513 -3.9 -12.8 Tryptophan synthase beta chain compare
MPMX20_01030 -3.9 -9.7 Lon protease compare
MPMX20_01349 -3.8 -6.8 Citrate synthase compare
MPMX20_01362 -3.6 -5.0 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_01549 -3.6 -3.5 ATP-binding/permease protein CydD compare
MPMX20_01570 -3.6 -2.3 Integration host factor subunit beta compare
MPMX20_00556 -3.6 -8.9 Ornithine carbamoyltransferase subunit F compare
MPMX20_04309 -3.6 -4.2 Aerobic glycerol-3-phosphate dehydrogenase compare
MPMX20_04443 -3.5 -3.1 Sec-independent protein translocase protein TatB compare
MPMX20_04543 -3.5 -12.3 Glycerol kinase compare
MPMX20_01354 -3.4 -2.5 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_02768 -3.4 -2.5 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_03005 -3.4 -7.1 Imidazole glycerol phosphate synthase subunit HisH compare
MPMX20_04768 -3.4 -7.2 hypothetical protein compare
MPMX20_03008 -3.3 -7.0 Histidine biosynthesis bifunctional protein HisIE compare
MPMX20_00106 -3.3 -3.2 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_00102 -3.3 -2.3 hypothetical protein compare
MPMX20_01355 -3.3 -0.9 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_02512 -3.2 -12.3 Tryptophan biosynthesis protein TrpCF compare
MPMX20_04275 -3.2 -1.8 Ribulose-phosphate 3-epimerase compare
MPMX20_03010 -3.2 -3.1 UDP-glucose 4-epimerase compare
MPMX20_01901 -3.2 -1.7 Integration host factor subunit alpha compare
MPMX20_03022 -3.2 -2.2 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_04483 -3.2 -2.2 Lipid III flippase compare
MPMX20_03490 -3.2 -5.6 SsrA-binding protein compare
MPMX20_02510 -3.2 -12.8 Anthranilate synthase component 1 compare
MPMX20_02511 -3.2 -12.5 Bifunctional protein TrpGD compare
MPMX20_00110 -3.1 -15.3 hypothetical protein compare
MPMX20_04626 -3.1 -3.0 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_02476 -3.1 -1.7 Putrescine export system permease protein SapC compare
MPMX20_04650 -3.0 -4.5 tRNA modification GTPase MnmE compare
MPMX20_01984 -2.9 -1.9 Ribonuclease T compare
MPMX20_03310 -2.9 -4.8 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_03466 -2.9 -8.0 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX20_03012 -2.9 -11.6 Glucose-1-phosphate thymidylyltransferase 1 compare
MPMX20_03355 -2.9 -8.1 Phosphoribosylglycinamide formyltransferase compare
MPMX20_02475 -2.9 -5.4 Putrescine export system permease protein SapB compare
MPMX20_04595 -2.8 -1.4 Glutamine synthetase compare
MPMX20_01334 -2.8 -7.8 Phosphoglucomutase compare
MPMX20_04119 -2.8 -2.0 DNA polymerase III subunit chi compare
MPMX20_01361 -2.7 -8.0 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_01550 -2.7 -2.0 Thioredoxin reductase compare
MPMX20_01286 -2.7 -1.4 Sec-independent protein translocase protein TatE compare
MPMX20_00721 -2.7 -2.8 Chaperone protein DnaJ compare
MPMX20_02766 -2.7 -3.7 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_02826 -2.7 -1.8 Cold shock-like protein CspB compare
MPMX20_01073 -2.7 -1.9 Nucleoid-associated protein YbaB compare
MPMX20_04197 -2.7 -5.3 Trk system potassium uptake protein TrkA compare
MPMX20_04133 -2.6 -5.2 Stringent starvation protein A compare
MPMX20_03685 -2.6 -2.6 RecBCD enzyme subunit RecC compare
MPMX20_01283 -2.6 -3.5 Cold shock-like protein CspE compare
MPMX20_01028 -2.6 -2.5 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_04028 -2.6 -1.7 hypothetical protein compare
MPMX20_04427 -2.6 -0.7 5S ribosomal RNA compare
MPMX20_03683 -2.6 -2.5 RecBCD enzyme subunit RecB compare
MPMX20_04469 -2.6 -4.2 Adenylate cyclase compare
MPMX20_00109 -2.6 -12.2 hypothetical protein compare
MPMX20_03382 -2.6 -1.6 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_03509 -2.5 -1.2 hypothetical protein compare
MPMX20_00453 -2.5 -1.6 RNA-binding protein Hfq compare
MPMX20_03019 -2.5 -9.9 hypothetical protein compare
MPMX20_01607 -2.5 -3.4 Outer membrane protein A compare
MPMX20_03013 -2.4 -11.3 dTDP-glucose 4,6-dehydratase compare
MPMX20_00708 -2.4 -5.2 Aerobic respiration control protein ArcA compare
MPMX20_04038 -2.4 -4.5 Glucitol operon repressor compare
MPMX20_03309 -2.4 -2.5 Phosphocarrier protein HPr compare
MPMX20_00812 -2.4 -6.6 Aconitate hydratase B compare
MPMX20_00769 -2.4 -8.7 2-isopropylmalate synthase compare
MPMX20_04262 -2.4 -6.1 Acetylornithine/succinyldiaminopimelate aminotransferase compare
MPMX20_00801 -2.4 -2.5 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
MPMX20_02701 -2.3 -2.2 Fatty acid metabolism regulator protein compare
MPMX20_00745 -2.3 -4.1 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_00807 -2.3 -1.6 Pyruvate dehydrogenase E1 component compare
MPMX20_04642 -2.2 -2.0 Phosphate import ATP-binding protein PstB compare
MPMX20_03390 -2.2 -6.1 Outer membrane protein assembly factor BamB compare
MPMX20_03396 -2.1 -5.8 Nucleoside diphosphate kinase compare
MPMX20_00720 -2.1 -1.0 Chaperone protein DnaK compare
MPMX20_02574 -2.1 -3.2 putative intracellular septation protein A compare
MPMX20_02801 -2.1 -8.0 Flagellar transcriptional regulator FlhC compare
MPMX20_01382 -2.1 -2.2 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
MPMX20_00258 -2.1 -5.1 Diacylglycerol kinase compare
MPMX20_02344 -2.1 -1.5 hypothetical protein compare
MPMX20_03705 -2.1 -8.4 Diaminopimelate decarboxylase compare
MPMX20_02672 -2.1 -16.0 hypothetical protein compare
MPMX20_00388 -2.0 -0.7 hypothetical protein compare
MPMX20_04730 -2.0 -3.5 hypothetical protein compare
MPMX20_01734 -2.0 -7.5 Lipid A biosynthesis lauroyltransferase compare
MPMX20_00086 -2.0 -2.3 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_02757 -2.0 -3.2 Glucose-6-phosphate 1-dehydrogenase compare
MPMX20_00105 -1.9 -4.8 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_01768 -1.9 -2.3 Large ribosomal RNA subunit accumulation protein YceD compare
MPMX20_04640 -1.9 -2.1 Phosphate transport system permease protein PstC compare
MPMX20_04532 -1.9 -2.0 Met repressor compare
MPMX20_00899 -1.9 -1.1 Ribonuclease HI compare
MPMX20_04463 -1.9 -6.0 DNA helicase II compare
MPMX20_04628 -1.9 -1.7 ATP synthase protein I compare
MPMX20_03206 -1.8 -6.7 NADH-quinone oxidoreductase subunit N compare
MPMX20_04530 -1.8 -6.1 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_03267 -1.8 -3.0 Phosphohistidine phosphatase SixA compare
MPMX20_00087 -1.8 -1.9 DNA-directed RNA polymerase subunit omega compare
MPMX20_02943 -1.8 -6.1 Flagellar motor switch protein FliN compare
MPMX20_02477 -1.8 -3.3 Peptide transport system ATP-binding protein SapD compare
MPMX20_02934 -1.8 -4.1 Flagellar hook-basal body complex protein FliE compare
MPMX20_04452 -1.8 -6.7 HTH-type transcriptional regulator MetR compare
MPMX20_00386 -1.8 -2.2 hypothetical protein compare
MPMX20_04141 -1.7 -4.2 Arginine repressor compare
MPMX20_03811 -1.7 -2.0 hypothetical protein compare
MPMX20_01112 -1.7 -10.1 putative fimbrial-like protein SfmH compare
MPMX20_04482 -1.7 -6.1 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase compare
MPMX20_03405 -1.7 -1.2 Protein IscX compare
MPMX20_02937 -1.7 -7.2 Flagellar assembly protein FliH compare
MPMX20_04344 -1.7 -1.1 hypothetical protein compare
MPMX20_01969 -1.7 -3.6 Carbonic anhydrase 1 compare
MPMX20_03218 -1.7 -2.6 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_03270 -1.7 -2.7 hypothetical protein compare
MPMX20_03753 -1.7 -4.1 Tyrosine recombinase XerD compare
MPMX20_00747 -1.7 -4.1 Ribosomal RNA small subunit methyltransferase A compare
MPMX20_04542 -1.7 -6.2 Glycerol uptake facilitator protein compare
MPMX20_03571 -1.6 -1.0 tRNA-Arg compare
MPMX20_02946 -1.6 -2.3 Flagellar biosynthetic protein FliQ compare
MPMX20_02704 -1.6 -1.7 hypothetical protein compare
MPMX20_03376 -1.6 -4.2 HTH-type transcriptional regulator MurR compare
MPMX20_03153 -1.6 -1.3 hypothetical protein compare
MPMX20_03248 -1.6 -2.5 Colicin V production protein compare
MPMX20_04029 -1.6 -2.1 Cyclic dipyrimidine nucleotide synthase compare
MPMX20_00570 -1.6 -9.2 putative BsuMI modification methylase subunit YdiO compare
MPMX20_03021 -1.6 -5.2 hypothetical protein compare
MPMX20_03580 -1.6 -4.3 Protein RecA compare
MPMX20_03706 -1.6 -6.7 Octopine catabolism/uptake operon regulatory protein OccR compare
MPMX20_01552 -1.6 -4.1 hypothetical protein compare
MPMX20_00666 -1.6 -1.6 tRNA-Leu compare
MPMX20_01135 -1.6 -3.1 HTH-type transcriptional regulator BetI compare
MPMX20_01029 -1.6 -3.2 ATP-dependent Clp protease ATP-binding subunit ClpX compare


Specific Phenotypes

For 16 genes in this experiment

For carbon source Glycerol in Enterobacter sp. TBS_079

For carbon source Glycerol across organisms