Experiment set9S327 for Enterobacter sp. TBS_079

Compare to:

D-Galacturonic Acid monohydrate carbon source

200 most important genes:

  gene name fitness t score description  
MPMX20_03986 -7.3 -5.0 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_03771 -6.8 -8.2 D-3-phosphoglycerate dehydrogenase compare
MPMX20_00831 -6.8 -4.7 RNA polymerase-binding transcription factor DksA compare
MPMX20_01566 -6.7 -11.3 Phosphoserine aminotransferase compare
MPMX20_00693 -6.7 -6.6 Phosphoserine phosphatase compare
MPMX20_01098 -6.2 -4.3 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_00225 -6.2 -7.4 Phosphoribosylamine--glycine ligase compare
MPMX20_03338 -6.1 -4.2 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_00927 -6.1 -13.0 Glutamate 5-kinase compare
MPMX20_01368 -6.0 -5.9 hypothetical protein compare
MPMX20_04499 -5.9 -11.4 Dihydroxy-acid dehydratase compare
MPMX20_03681 -5.9 -13.6 Amino-acid acetyltransferase compare
MPMX20_04531 -5.8 -8.9 Cystathionine gamma-synthase compare
MPMX20_04522 -5.8 -4.0 N-acetyl-gamma-glutamyl-phosphate reductase compare
MPMX20_00710 -5.8 -13.5 Bifunctional aspartokinase/homoserine dehydrogenase 1 compare
MPMX20_03354 -5.8 -12.9 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_03426 -5.8 -13.9 Phosphoribosylformylglycinamidine synthase compare
MPMX20_00928 -5.7 -10.3 Gamma-glutamyl phosphate reductase compare
MPMX20_03006 -5.6 -8.6 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX20_00226 -5.6 -8.5 Bifunctional purine biosynthesis protein PurH compare
MPMX20_03264 -5.6 -5.4 Chorismate synthase compare
MPMX20_04077 -5.6 -10.0 Argininosuccinate synthase compare
MPMX20_04520 -5.6 -8.5 Argininosuccinate lyase compare
MPMX20_01354 -5.5 -3.8 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_03007 -5.5 -7.5 Imidazole glycerol phosphate synthase subunit HisF compare
MPMX20_01349 -5.5 -3.8 Citrate synthase compare
MPMX20_00711 -5.4 -12.2 Homoserine kinase compare
MPMX20_00740 -5.4 -7.5 Carbamoyl-phosphate synthase large chain compare
MPMX20_00712 -5.4 -11.5 Threonine synthase compare
MPMX20_03004 -5.4 -10.3 Histidine biosynthesis bifunctional protein HisB compare
MPMX20_00544 -5.4 -8.2 Aspartate carbamoyltransferase catalytic subunit compare
MPMX20_02755 -5.3 -5.2 KHG/KDPG aldolase compare
MPMX20_04523 -5.3 -8.9 Acetylornithine deacetylase compare
MPMX20_03247 -5.2 -9.9 Amidophosphoribosyltransferase compare
MPMX20_04497 -5.2 -9.9 HTH-type transcriptional regulator GltC compare
MPMX20_03002 -5.2 -14.1 Histidinol dehydrogenase compare
MPMX20_01596 -5.1 -14.3 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_03001 -5.1 -13.1 ATP phosphoribosyltransferase compare
MPMX20_03468 -5.0 -9.1 T-protein compare
MPMX20_00766 -5.0 -8.3 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_01355 -5.0 -1.6 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_00230 -4.9 -8.9 Homoserine O-succinyltransferase compare
MPMX20_04442 -4.9 -7.5 Sec-independent protein translocase protein TatC compare
MPMX20_04521 -4.9 -8.1 Acetylglutamate kinase compare
MPMX20_01030 -4.8 -8.7 Lon protease compare
MPMX20_01366 -4.8 -6.6 Tol-Pal system protein TolQ compare
MPMX20_03008 -4.8 -9.8 Histidine biosynthesis bifunctional protein HisIE compare
MPMX20_01567 -4.8 -5.7 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_00739 -4.8 -4.7 Carbamoyl-phosphate synthase small chain compare
MPMX20_01369 -4.8 -12.3 Tol-Pal system protein TolB compare
MPMX20_01741 -4.8 -4.6 Dihydroorotase compare
MPMX20_04496 -4.7 -7.3 Ketol-acid reductoisomerase (NADP(+)) compare
MPMX20_03003 -4.7 -12.2 Histidinol-phosphate aminotransferase compare
MPMX20_03005 -4.7 -9.5 Imidazole glycerol phosphate synthase subunit HisH compare
MPMX20_00093 -4.7 -7.2 Orotate phosphoribosyltransferase compare
MPMX20_01097 -4.7 -8.9 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_04278 -4.6 -3.2 3-dehydroquinate synthase compare
MPMX20_04443 -4.5 -5.3 Sec-independent protein translocase protein TatB compare
MPMX20_01367 -4.5 -9.0 Tol-Pal system protein TolR compare
MPMX20_02494 -4.5 -9.0 Orotidine 5'-phosphate decarboxylase compare
MPMX20_00773 -4.4 -15.7 Catabolite repressor/activator compare
MPMX20_04768 -4.4 -12.8 hypothetical protein compare
MPMX20_03019 -4.4 -16.7 hypothetical protein compare
MPMX20_04189 -4.4 -6.0 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_03852 -4.4 -15.7 Cystathionine beta-lyase MetC compare
MPMX20_00514 -4.4 -6.7 Fructose-1,6-bisphosphatase class 1 compare
MPMX20_00976 -4.4 -5.2 Pyrroline-5-carboxylate reductase compare
MPMX20_01950 -4.4 -5.1 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_00768 -4.3 -14.7 3-isopropylmalate dehydrogenase compare
MPMX20_00556 -4.3 -10.2 Ornithine carbamoyltransferase subunit F compare
MPMX20_04650 -4.3 -2.9 tRNA modification GTPase MnmE compare
MPMX20_01548 -4.2 -5.8 putative ABC transporter ATP-binding/permease protein compare
MPMX20_04469 -4.2 -4.1 Adenylate cyclase compare
MPMX20_01362 -4.2 -5.7 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_02574 -4.2 -2.9 putative intracellular septation protein A compare
MPMX20_04162 -4.2 -5.7 3-dehydroquinate dehydratase compare
MPMX20_01334 -4.2 -11.3 Phosphoglucomutase compare
MPMX20_02513 -4.1 -14.1 Tryptophan synthase beta chain compare
MPMX20_01370 -4.0 -6.1 Peptidoglycan-associated lipoprotein compare
MPMX20_01361 -4.0 -9.6 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_01549 -4.0 -3.9 ATP-binding/permease protein CydD compare
MPMX20_04498 -4.0 -12.2 L-threonine dehydratase biosynthetic IlvA compare
MPMX20_00767 -3.9 -13.3 3-isopropylmalate dehydratase large subunit 1 compare
MPMX20_02514 -3.9 -7.5 Tryptophan synthase alpha chain compare
MPMX20_00109 -3.9 -23.3 hypothetical protein compare
MPMX20_04440 -3.9 -2.5 Transcription antitermination protein RfaH compare
MPMX20_00102 -3.9 -2.7 hypothetical protein compare
MPMX20_00106 -3.8 -3.7 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_04483 -3.8 -2.6 Lipid III flippase compare
MPMX20_01028 -3.8 -2.6 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_03022 -3.8 -2.6 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_00110 -3.8 -20.6 hypothetical protein compare
MPMX20_03010 -3.7 -3.6 UDP-glucose 4-epimerase compare
MPMX20_01353 -3.6 -7.2 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_03013 -3.5 -11.7 dTDP-glucose 4,6-dehydratase compare
MPMX20_03018 -3.5 -7.5 hypothetical protein compare
MPMX20_04595 -3.5 -2.4 Glutamine synthetase compare
MPMX20_03218 -3.5 -5.5 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_02512 -3.4 -13.3 Tryptophan biosynthesis protein TrpCF compare
MPMX20_04524 -3.3 -15.5 Phosphoenolpyruvate carboxylase compare
MPMX20_03466 -3.3 -8.4 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX20_03382 -3.3 -2.3 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_04530 -3.3 -12.5 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_04626 -3.3 -5.0 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_04119 -3.2 -3.1 DNA polymerase III subunit chi compare
MPMX20_00775 -3.2 -4.7 Ribosomal RNA small subunit methyltransferase H compare
MPMX20_03685 -3.2 -3.1 RecBCD enzyme subunit RecC compare
MPMX20_02511 -3.2 -12.1 Bifunctional protein TrpGD compare
MPMX20_01607 -3.2 -5.6 Outer membrane protein A compare
MPMX20_01350 -3.2 -4.6 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_00241 -3.1 -12.9 Glucose-6-phosphate isomerase compare
MPMX20_04197 -3.1 -6.3 Trk system potassium uptake protein TrkA compare
MPMX20_04140 -3.1 -10.8 Malate dehydrogenase compare
MPMX20_02203 -3.1 -3.5 hypothetical protein compare
MPMX20_04639 -3.1 -1.9 Phosphate-binding protein PstS compare
MPMX20_03207 -3.0 -8.4 NADH-quinone oxidoreductase subunit M compare
MPMX20_00105 -3.0 -13.4 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_03021 -3.0 -9.5 hypothetical protein compare
MPMX20_04279 -3.0 -3.9 Shikimate kinase 1 compare
MPMX20_04444 -3.0 -2.3 Sec-independent protein translocase protein TatA compare
MPMX20_04557 -3.0 -9.7 Sensor histidine kinase CpxA compare
MPMX20_02510 -2.9 -14.0 Anthranilate synthase component 1 compare
MPMX20_03310 -2.9 -6.4 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_03217 -2.9 -6.2 NADH-quinone oxidoreductase subunit B compare
MPMX20_03212 -2.9 -7.2 NADH-quinone oxidoreductase subunit H compare
MPMX20_00807 -2.9 -2.8 Pyruvate dehydrogenase E1 component compare
MPMX20_03490 -2.8 -5.3 SsrA-binding protein compare
MPMX20_03407 -2.8 -4.7 Chaperone protein HscA compare
MPMX20_03215 -2.8 -4.6 NADH-quinone oxidoreductase subunit E compare
MPMX20_01356 -2.8 -9.9 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_04276 -2.8 -7.5 DNA adenine methylase compare
MPMX20_01984 -2.8 -3.1 Ribonuclease T compare
MPMX20_03683 -2.8 -4.2 RecBCD enzyme subunit RecB compare
MPMX20_00812 -2.8 -8.2 Aconitate hydratase B compare
MPMX20_04467 -2.7 -8.3 Diaminopimelate epimerase compare
MPMX20_02591 -2.7 -6.9 DNA-binding protein H-NS compare
MPMX20_03308 -2.7 -8.4 Cysteine synthase A compare
MPMX20_00769 -2.6 -9.9 2-isopropylmalate synthase compare
MPMX20_04642 -2.6 -3.1 Phosphate import ATP-binding protein PstB compare
MPMX20_03012 -2.6 -13.0 Glucose-1-phosphate thymidylyltransferase 1 compare
MPMX20_04489 -2.6 -14.5 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_03641 -2.6 -7.8 Phosphoadenosine phosphosulfate reductase compare
MPMX20_00899 -2.6 -2.5 Ribonuclease HI compare
MPMX20_01901 -2.6 -2.5 Integration host factor subunit alpha compare
MPMX20_03209 -2.6 -3.3 NADH-quinone oxidoreductase subunit K compare
MPMX20_03408 -2.5 -3.2 Co-chaperone protein HscB compare
MPMX20_03642 -2.5 -11.1 Sulfite reductase [NADPH] hemoprotein beta-component compare
MPMX20_02477 -2.5 -5.5 Peptide transport system ATP-binding protein SapD compare
MPMX20_03208 -2.5 -8.3 NADH-quinone oxidoreductase subunit L compare
MPMX20_02475 -2.5 -6.4 Putrescine export system permease protein SapB compare
MPMX20_01386 -2.5 -5.0 UDP-glucose 4-epimerase compare
MPMX20_03469 -2.4 -10.1 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive compare
MPMX20_01550 -2.4 -3.2 Thioredoxin reductase compare
MPMX20_02635 -2.4 -3.8 Release factor glutamine methyltransferase compare
MPMX20_01551 -2.4 -7.5 Leucine-responsive regulatory protein compare
MPMX20_04000 -2.4 -8.8 Altronate dehydratase conserved
MPMX20_03206 -2.4 -9.2 NADH-quinone oxidoreductase subunit N compare
MPMX20_01352 -2.4 -10.1 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_03153 -2.3 -2.6 hypothetical protein compare
MPMX20_02295 -2.3 -2.2 hypothetical protein compare
MPMX20_04137 -2.3 -4.6 Inner membrane protein YhcB compare
MPMX20_03227 -2.3 -6.6 Phosphate acetyltransferase compare
MPMX20_03643 -2.3 -7.8 Sulfite reductase [NADPH] flavoprotein alpha-component compare
MPMX20_03213 -2.3 -9.3 NADH-quinone oxidoreductase subunit G compare
MPMX20_00108 -2.3 -14.0 hypothetical protein compare
MPMX20_03705 -2.3 -9.9 Diaminopimelate decarboxylase compare
MPMX20_02478 -2.2 -7.9 Putrescine export system ATP-binding protein SapF compare
MPMX20_00998 -2.2 -3.8 Sec translocon accessory complex subunit YajC compare
MPMX20_03216 -2.2 -11.3 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_03214 -2.2 -9.5 NADH-quinone oxidoreductase subunit F compare
MPMX20_04110 -2.2 -6.1 Nitrogen regulatory protein compare
MPMX20_01570 -2.1 -2.9 Integration host factor subunit beta compare
MPMX20_04465 -2.1 -5.7 Tyrosine recombinase XerC compare
MPMX20_04028 -2.1 -2.6 hypothetical protein compare
MPMX20_03211 -2.1 -3.0 NADH-quinone oxidoreductase subunit I compare
MPMX20_04529 -2.0 -6.0 5,10-methylenetetrahydrofolate reductase compare
MPMX20_02476 -2.0 -3.2 Putrescine export system permease protein SapC compare
MPMX20_03090 -2.0 -1.6 Methionine--tRNA ligase compare
MPMX20_01029 -2.0 -4.5 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_00745 -2.0 -6.1 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_03210 -1.9 -7.0 NADH-quinone oxidoreductase subunit J compare
MPMX20_04393 -1.9 -6.2 Low-affinity inorganic phosphate transporter 1 compare
MPMX20_04275 -1.9 -2.8 Ribulose-phosphate 3-epimerase compare
MPMX20_03636 -1.9 -4.1 Adenylyl-sulfate kinase compare
MPMX20_02672 -1.9 -15.2 hypothetical protein compare
MPMX20_04385 -1.9 -6.6 hypothetical protein compare
MPMX20_04640 -1.9 -2.9 Phosphate transport system permease protein PstC compare
MPMX20_01357 -1.8 -4.8 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_03020 -1.8 -4.4 hypothetical protein compare
MPMX20_03409 -1.8 -3.0 Iron-binding protein IscA compare
MPMX20_03591 -1.8 -8.3 Glucitol operon repressor compare
MPMX20_00086 -1.8 -3.0 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_02593 -1.8 -10.2 Regulator of RpoS compare
MPMX20_04038 -1.8 -5.0 Glucitol operon repressor compare
MPMX20_03706 -1.8 -7.7 Octopine catabolism/uptake operon regulatory protein OccR compare
MPMX20_03756 -1.8 -3.8 FAD assembly factor SdhE compare
MPMX20_01382 -1.8 -2.9 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
MPMX20_02768 -1.8 -2.8 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_01995 -1.8 -4.7 Transcriptional regulator SlyA compare
MPMX20_04306 -1.8 -5.7 Glycerol-3-phosphate regulon repressor compare


Specific Phenotypes

For 4 genes in this experiment

For carbon source D-Galacturonic Acid monohydrate in Enterobacter sp. TBS_079

For carbon source D-Galacturonic Acid monohydrate across organisms