Experiment set9S322 for Enterobacter sp. TBS_079

Compare to:

Xylitol carbon source

200 most detrimental genes:

  gene name fitness t score description  
MPMX20_03591 +6.9 44.2 Glucitol operon repressor compare
MPMX20_00197 +2.1 1.9 tRNA-Tyr compare
MPMX20_02879 +2.1 2.0 hypothetical protein compare
MPMX20_02881 +2.0 2.7 hypothetical protein compare
MPMX20_03254 +1.7 3.6 USG-1 protein compare
MPMX20_02546 +1.6 3.6 hypothetical protein compare
MPMX20_02926 +1.5 3.9 hypothetical protein compare
MPMX20_02919 +1.5 3.8 hypothetical protein compare
MPMX20_02873 +1.3 3.2 hypothetical protein compare
MPMX20_04253 +1.3 0.7 Malonate decarboxylase acyl carrier protein compare
MPMX20_02707 +1.2 2.7 Septum site-determining protein MinC compare
MPMX20_03334 +1.2 1.2 hypothetical protein compare
MPMX20_02924 +1.1 3.5 hypothetical protein compare
MPMX20_02861 +1.1 4.1 hypothetical protein compare
MPMX20_02868 +1.1 3.8 Protein UmuD compare
MPMX20_02902 +1.1 3.6 Serine/threonine-protein phosphatase 1 compare
MPMX20_01967 +1.1 1.9 hypothetical protein compare
MPMX20_02918 +1.1 2.0 hypothetical protein compare
MPMX20_03095 +1.1 1.6 hypothetical protein compare
MPMX20_02893 +1.1 1.6 hypothetical protein compare
MPMX20_04028 +1.0 1.7 hypothetical protein compare
MPMX20_02738 +1.0 3.5 RNA chaperone ProQ compare
MPMX20_00386 +1.0 1.2 hypothetical protein compare
MPMX20_03763 +1.0 2.0 Glycine cleavage system H protein compare
MPMX20_02598 +1.0 1.6 tRNA-Tyr compare
MPMX20_02878 +1.0 3.1 hypothetical protein compare
MPMX20_01837 +1.0 2.7 hypothetical protein compare
MPMX20_02920 +1.0 2.5 hypothetical protein compare
MPMX20_02909 +0.9 3.0 hypothetical protein compare
MPMX20_02882 +0.9 3.0 hypothetical protein compare
MPMX20_02901 +0.9 3.8 hypothetical protein compare
MPMX20_01793 +0.9 2.7 Multiple stress resistance protein BhsA compare
MPMX20_02864 +0.9 1.4 hypothetical protein compare
MPMX20_02917 +0.9 2.3 hypothetical protein compare
MPMX20_03754 +0.9 2.6 Flavodoxin 2 compare
MPMX20_02057 +0.9 2.4 hypothetical protein compare
MPMX20_04344 +0.9 0.9 hypothetical protein compare
MPMX20_02892 +0.9 3.9 hypothetical protein compare
MPMX20_02916 +0.9 1.7 hypothetical protein compare
MPMX20_03234 +0.8 1.8 putative Nudix hydrolase YfcD compare
MPMX20_04558 +0.8 1.7 Protein YiiM compare
MPMX20_02905 +0.8 2.7 hypothetical protein compare
MPMX20_02894 +0.8 1.9 hypothetical protein compare
MPMX20_03122 +0.8 2.5 hypothetical protein compare
MPMX20_02875 +0.8 3.8 hypothetical protein compare
MPMX20_02888 +0.8 2.8 hypothetical protein compare
MPMX20_04167 +0.8 1.8 Ribosomal protein L11 methyltransferase compare
MPMX20_01420 +0.8 3.9 putative multidrug ABC transporter permease YbhR compare
MPMX20_02883 +0.8 2.8 hypothetical protein compare
MPMX20_01427 +0.8 1.5 Protein FimG compare
MPMX20_03631 +0.8 2.0 tRNA pseudouridine synthase D compare
MPMX20_02907 +0.8 2.3 hypothetical protein compare
MPMX20_02877 +0.8 2.6 hypothetical protein compare
MPMX20_03163 +0.8 1.1 hypothetical protein compare
MPMX20_04287 +0.8 3.2 GMP/IMP nucleotidase YrfG compare
MPMX20_04699 +0.8 2.9 hypothetical protein compare
MPMX20_02880 +0.8 3.9 hypothetical protein compare
MPMX20_01533 +0.8 1.6 hypothetical protein compare
MPMX20_03134 +0.8 2.9 Sugar efflux transporter B compare
MPMX20_02748 +0.8 2.3 Protein YobA compare
MPMX20_02162 +0.8 1.9 hypothetical protein compare
MPMX20_03261 +0.8 2.4 Elongation factor P hydroxylase compare
MPMX20_04363 +0.8 1.5 hypothetical protein compare
MPMX20_00816 +0.8 1.4 hypothetical protein compare
MPMX20_00545 +0.7 1.9 Arginine repressor compare
MPMX20_03465 +0.7 1.6 Ribosome-associated inhibitor A compare
MPMX20_03627 +0.7 2.3 RNA polymerase sigma factor RpoS compare
MPMX20_04191 +0.7 2.2 DNA topoisomerase 1 compare
MPMX20_03804 +0.7 2.7 Ribosomal RNA small subunit methyltransferase E compare
MPMX20_01775 +0.7 2.2 3-oxoacyl-[acyl-carrier-protein] synthase 2 compare
MPMX20_04094 +0.7 2.1 hypothetical protein compare
MPMX20_01855 +0.7 1.9 hypothetical protein compare
MPMX20_01276 +0.7 2.4 Regulator of nucleoside diphosphate kinase compare
MPMX20_01210 +0.7 1.8 hypothetical protein compare
MPMX20_02710 +0.7 2.6 Ribonuclease D compare
MPMX20_01073 +0.7 1.0 Nucleoid-associated protein YbaB compare
MPMX20_03678 +0.7 0.6 tRNA-Met compare
MPMX20_02925 +0.7 4.1 hypothetical protein compare
MPMX20_04765 +0.7 2.4 ISNCY family transposase ISRor2 compare
MPMX20_03433 +0.7 1.3 Ferredoxin YfhL compare
MPMX20_04079 +0.7 1.4 Protein-export membrane protein SecG compare
MPMX20_03184 +0.7 2.3 Glycerophosphodiester phosphodiesterase, periplasmic compare
MPMX20_02095 +0.7 3.1 Polyol:NADP oxidoreductase compare
MPMX20_04151 +0.7 2.9 Metalloprotease TldD compare
MPMX20_01531 +0.7 1.9 Low specificity L-threonine aldolase compare
MPMX20_04702 +0.7 3.1 hypothetical protein compare
MPMX20_00255 +0.7 1.8 Chorismate pyruvate-lyase compare
MPMX20_03610 +0.7 2.8 Formate hydrogenlyase regulatory protein HycA compare
MPMX20_02005 +0.7 2.1 Endonuclease III compare
MPMX20_02871 +0.7 2.4 hypothetical protein compare
MPMX20_04241 +0.7 1.1 Protein SlyX compare
MPMX20_03379 +0.7 2.8 Putative NADP-dependent oxidoreductase YfmJ compare
MPMX20_01031 +0.7 1.2 DNA-binding protein HU-beta compare
MPMX20_04572 +0.7 2.1 hypothetical protein compare
MPMX20_02908 +0.7 1.7 hypothetical protein compare
MPMX20_04360 +0.7 2.7 Acyl carrier protein compare
MPMX20_03266 +0.7 2.7 Endonuclease MutS2 compare
MPMX20_01857 +0.7 2.5 hypothetical protein compare
MPMX20_03376 +0.7 1.9 HTH-type transcriptional regulator MurR compare
MPMX20_02906 +0.7 1.4 hypothetical protein compare
MPMX20_02243 +0.7 1.9 HTH-type transcriptional regulator SutR compare
MPMX20_01303 +0.7 2.1 Glutamine transport ATP-binding protein GlnQ compare
MPMX20_00515 +0.7 2.8 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase compare
MPMX20_01096 +0.7 2.3 tRNA 2-selenouridine synthase compare
MPMX20_00908 +0.6 3.1 Glutathione hydrolase-like YwrD proenzyme compare
MPMX20_01240 +0.6 1.7 Enterobactin biosynthesis protein YbdZ compare
MPMX20_04464 +0.6 1.8 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB compare
MPMX20_02862 +0.6 2.9 hypothetical protein compare
MPMX20_04615 +0.6 2.6 Ribokinase compare
MPMX20_01026 +0.6 2.1 DNA-binding transcriptional regulator BolA compare
MPMX20_03202 +0.6 2.0 Protein ElaB compare
MPMX20_04137 +0.6 1.3 Inner membrane protein YhcB compare
MPMX20_02208 +0.6 1.6 Transcriptional repressor FrmR compare
MPMX20_02904 +0.6 2.2 hypothetical protein compare
MPMX20_03974 +0.6 0.9 hypothetical protein compare
MPMX20_01413 +0.6 1.4 Molybdopterin synthase sulfur carrier subunit compare
MPMX20_03773 +0.6 1.4 HTH-type transcriptional regulator ArgP compare
MPMX20_00317 +0.6 2.1 Putative phosphonates utilization ATP-binding protein PhnK compare
MPMX20_02368 +0.6 1.4 Stationary-phase-induced ribosome-associated protein compare
MPMX20_01615 +0.6 2.1 putative protein YccU compare
MPMX20_00969 +0.6 2.5 D-alanine--D-alanine ligase A compare
MPMX20_00441 +0.6 0.7 Phosphatidylserine decarboxylase proenzyme compare
MPMX20_02929 +0.6 1.3 hypothetical protein compare
MPMX20_04272 +0.6 0.7 hypothetical protein compare
MPMX20_02251 +0.6 2.5 hypothetical protein compare
MPMX20_00902 +0.6 1.6 Glc operon transcriptional activator compare
MPMX20_01379 +0.6 1.9 Zinc transporter ZitB compare
MPMX20_00876 +0.6 1.4 Peptidyl-tRNA hydrolase ArfB compare
MPMX20_02682 +0.6 2.5 hypothetical protein compare
MPMX20_00929 +0.6 0.9 tRNA-Thr compare
MPMX20_02884 +0.6 3.8 hypothetical protein compare
MPMX20_02258 +0.6 1.8 hypothetical protein compare
MPMX20_03324 +0.6 2.8 NADP-dependent malic enzyme compare
MPMX20_04097 +0.6 1.4 Intermembrane phospholipid transport system binding protein MlaB compare
MPMX20_00072 +0.6 2.0 5-hydroxyisourate hydrolase compare
MPMX20_02973 +0.6 2.5 hypothetical protein compare
MPMX20_04188 +0.6 1.4 hypothetical protein compare
MPMX20_00282 +0.6 1.9 Redox-sensitive transcriptional activator SoxR compare
MPMX20_01860 +0.6 1.7 Thiamine import ATP-binding protein ThiQ compare
MPMX20_03085 +0.6 1.3 Low molecular weight protein-tyrosine-phosphatase Etp compare
MPMX20_04357 +0.6 2.2 hypothetical protein compare
MPMX20_02860 +0.6 2.2 hypothetical protein compare
MPMX20_03745 +0.6 2.5 hypothetical protein compare
MPMX20_04562 +0.6 2.7 HTH-type transcriptional activator RhaS compare
MPMX20_02870 +0.6 3.4 hypothetical protein compare
MPMX20_00682 +0.6 2.9 Phosphopentomutase compare
MPMX20_00837 +0.6 2.9 Iron(3+)-hydroxamate import ATP-binding protein FhuC compare
MPMX20_02921 +0.6 2.3 hypothetical protein compare
MPMX20_03738 +0.6 1.5 PTS system oligo-beta-mannoside-specific EIIB component compare
MPMX20_02399 +0.6 1.9 hypothetical protein compare
MPMX20_03660 +0.6 1.5 hypothetical protein compare
MPMX20_00909 +0.6 1.5 Omega-amidase YafV compare
MPMX20_01386 +0.6 2.6 UDP-glucose 4-epimerase compare
MPMX20_01230 +0.6 2.1 HTH-type transcriptional regulator BetI compare
MPMX20_03043 +0.6 1.5 Low molecular weight protein-tyrosine-phosphatase Wzb compare
MPMX20_02616 +0.6 3.0 Nitrate/nitrite transporter NarK compare
MPMX20_04054 +0.6 1.6 Osmotically-inducible protein Y compare
MPMX20_01886 +0.6 1.9 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase compare
MPMX20_03189 +0.6 2.3 Nicotinamide-nucleotide amidohydrolase PncC compare
MPMX20_03885 +0.6 2.3 4,5-DOPA dioxygenase extradiol compare
MPMX20_03700 +0.6 1.7 hypothetical protein compare
MPMX20_01968 +0.6 1.5 hypothetical protein compare
MPMX20_00252 +0.6 2.3 Maltose/maltodextrin import ATP-binding protein MalK compare
MPMX20_03255 +0.6 3.0 Erythronate-4-phosphate dehydrogenase compare
MPMX20_03761 +0.6 2.2 putative oxidoreductase YgfF compare
MPMX20_04505 +0.6 2.4 HTH-type transcriptional regulator HdfR compare
MPMX20_02889 +0.6 3.1 hypothetical protein compare
MPMX20_02659 +0.6 2.1 Serine/threonine-protein kinase PknD compare
MPMX20_00489 +0.6 2.4 Quinone oxidoreductase 2 compare
MPMX20_03224 +0.6 2.0 hypothetical protein compare
MPMX20_00705 +0.6 2.4 Transcriptional regulatory protein CreB compare
MPMX20_02874 +0.6 3.3 hypothetical protein compare
MPMX20_04453 +0.6 2.4 Biotin transporter compare
MPMX20_03785 +0.5 2.0 L-aspartate dehydrogenase compare
MPMX20_02896 +0.5 2.0 Lysozyme RrrD compare
MPMX20_01619 +0.5 2.9 HTH-type transcriptional activator RhaS compare
MPMX20_02927 +0.5 1.7 hypothetical protein compare
MPMX20_00254 +0.5 2.4 hypothetical protein compare
MPMX20_04052 +0.5 1.6 hypothetical protein compare
MPMX20_01953 +0.5 2.8 Cystathionine beta-lyase compare
MPMX20_01333 +0.5 1.2 Negative modulator of initiation of replication compare
MPMX20_03205 +0.5 2.5 Chemotaxis protein CheV compare
MPMX20_04125 +0.5 2.7 hypothetical protein compare
MPMX20_02267 +0.5 1.5 hypothetical protein compare
MPMX20_02078 +0.5 2.3 hypothetical protein compare
MPMX20_04165 +0.5 0.8 putative membrane protein YhdT compare
MPMX20_02471 +0.5 1.0 Phage shock protein B compare
MPMX20_02872 +0.5 1.3 hypothetical protein compare
MPMX20_04529 +0.5 1.4 5,10-methylenetetrahydrofolate reductase compare
MPMX20_01842 +0.5 1.9 putative oxidoreductase compare
MPMX20_01864 +0.5 1.9 Exodeoxyribonuclease III compare
MPMX20_04526 +0.5 1.9 Fructose-6-phosphate aldolase 2 compare
MPMX20_01391 +0.5 1.4 Molybdenum transport system permease protein ModB compare
MPMX20_03249 +0.5 1.1 Cell division protein DedD compare
MPMX20_02931 +0.5 1.7 hypothetical protein compare
MPMX20_00038 +0.5 1.1 hypothetical protein compare
MPMX20_01339 +0.5 1.9 Potassium-transporting ATPase KdpC subunit compare
MPMX20_00982 +0.5 1.6 Recombination-associated protein RdgC compare
MPMX20_02059 +0.5 2.6 Thermostable carboxypeptidase 1 compare
MPMX20_00823 +0.5 1.4 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Enterobacter sp. TBS_079 in carbon source experiments

For carbon source Xylitol across organisms