Experiment set9S321 for Enterobacter sp. TBS_079

Compare to:

Sodium Formate carbon source

200 most important genes:

  gene name fitness t score description  
MPMX20_04443 -5.4 -3.3 Sec-independent protein translocase protein TatB compare
MPMX20_04162 -5.1 -3.5 3-dehydroquinate dehydratase compare
MPMX20_02646 -4.8 -2.4 hypothetical protein compare
MPMX20_01722 -4.5 -2.3 putative csgAB operon transcriptional regulatory protein compare
MPMX20_01548 -4.3 -5.1 putative ABC transporter ATP-binding/permease protein compare
MPMX20_01549 -4.3 -2.9 ATP-binding/permease protein CydD compare
MPMX20_00388 -4.2 -1.1 hypothetical protein compare
MPMX20_03509 -4.2 -1.5 hypothetical protein compare
MPMX20_01984 -4.1 -2.5 Ribonuclease T compare
MPMX20_02701 -4.0 -2.7 Fatty acid metabolism regulator protein compare
MPMX20_03090 -3.9 -1.4 Methionine--tRNA ligase compare
MPMX20_01029 -3.7 -2.6 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_04768 -3.7 -20.7 hypothetical protein compare
MPMX20_02476 -3.6 -2.5 Putrescine export system permease protein SapC compare
MPMX20_00831 -3.6 -5.2 RNA polymerase-binding transcription factor DksA compare
MPMX20_04626 -3.6 -2.5 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_03022 -3.6 -2.5 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_01028 -3.6 -2.5 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_04440 -3.5 -1.8 Transcription antitermination protein RfaH compare
MPMX20_04483 -3.5 -2.4 Lipid III flippase compare
MPMX20_03018 -3.5 -7.2 hypothetical protein compare
MPMX20_01367 -3.5 -5.9 Tol-Pal system protein TolR compare
MPMX20_04119 -3.4 -2.3 DNA polymerase III subunit chi compare
MPMX20_00998 -3.3 -3.0 Sec translocon accessory complex subunit YajC compare
MPMX20_01361 -3.3 -9.4 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_01362 -3.3 -5.0 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_03019 -3.2 -16.0 hypothetical protein compare
MPMX20_03685 -3.1 -2.2 RecBCD enzyme subunit RecC compare
MPMX20_02766 -3.1 -5.0 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_03683 -3.1 -2.1 RecBCD enzyme subunit RecB compare
MPMX20_01370 -3.1 -2.6 Peptidoglycan-associated lipoprotein compare
MPMX20_03218 -3.0 -3.1 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_04469 -3.0 -4.4 Adenylate cyclase compare
MPMX20_03382 -3.0 -2.0 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_00110 -2.9 -15.6 hypothetical protein compare
MPMX20_03923 -2.9 -3.3 hypothetical protein compare
MPMX20_04189 -2.9 -5.3 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_00514 -2.8 -8.2 Fructose-1,6-bisphosphatase class 1 compare
MPMX20_01118 -2.8 -1.0 hypothetical protein compare
MPMX20_00109 -2.8 -15.6 hypothetical protein compare
MPMX20_01368 -2.8 -3.4 hypothetical protein compare
MPMX20_03010 -2.8 -7.0 UDP-glucose 4-epimerase compare
MPMX20_03310 -2.7 -5.3 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_01366 -2.7 -4.5 Tol-Pal system protein TolQ compare
MPMX20_00106 -2.7 -7.6 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_03264 -2.7 -3.6 Chorismate synthase compare
MPMX20_02635 -2.5 -2.7 Release factor glutamine methyltransferase compare
MPMX20_01369 -2.5 -6.4 Tol-Pal system protein TolB compare
MPMX20_04489 -2.5 -11.8 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_03209 -2.5 -2.0 NADH-quinone oxidoreductase subunit K compare
MPMX20_04670 -2.5 -2.4 hypothetical protein compare
MPMX20_03021 -2.4 -8.4 hypothetical protein compare
MPMX20_00740 -2.4 -7.1 Carbamoyl-phosphate synthase large chain compare
MPMX20_04197 -2.4 -6.5 Trk system potassium uptake protein TrkA compare
MPMX20_00105 -2.4 -8.3 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_03686 -2.3 -1.3 hypothetical protein compare
MPMX20_01741 -2.3 -4.8 Dihydroorotase compare
MPMX20_00108 -2.3 -11.4 hypothetical protein compare
MPMX20_03986 -2.3 -2.7 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_04278 -2.3 -3.8 3-dehydroquinate synthase compare
MPMX20_03017 -2.3 -7.9 hypothetical protein compare
MPMX20_03210 -2.3 -4.1 NADH-quinone oxidoreductase subunit J compare
MPMX20_00739 -2.3 -3.5 Carbamoyl-phosphate synthase small chain compare
MPMX20_03490 -2.2 -3.7 SsrA-binding protein compare
MPMX20_00899 -2.2 -1.6 Ribonuclease HI compare
MPMX20_01334 -2.2 -5.8 Phosphoglucomutase compare
MPMX20_00136 -2.2 -1.2 hypothetical protein compare
MPMX20_04442 -2.2 -4.0 Sec-independent protein translocase protein TatC compare
MPMX20_04642 -2.2 -2.4 Phosphate import ATP-binding protein PstB compare
MPMX20_01552 -2.2 -5.6 hypothetical protein compare
MPMX20_01596 -2.2 -12.7 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_00226 -2.2 -5.8 Bifunctional purine biosynthesis protein PurH compare
MPMX20_04530 -2.1 -8.2 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_00721 -2.1 -2.7 Chaperone protein DnaJ compare
MPMX20_00453 -2.1 -1.8 RNA-binding protein Hfq compare
MPMX20_02203 -2.1 -1.7 hypothetical protein compare
MPMX20_01286 -2.0 -1.3 Sec-independent protein translocase protein TatE compare
MPMX20_01816 -2.0 -1.3 High frequency lysogenization protein HflD compare
MPMX20_02475 -2.0 -5.1 Putrescine export system permease protein SapB compare
MPMX20_02767 -2.0 -2.8 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_01181 -2.0 -3.9 Putative transferase YhbX compare
MPMX20_00087 -2.0 -2.4 DNA-directed RNA polymerase subunit omega compare
MPMX20_04194 -2.0 -1.6 Peptide deformylase compare
MPMX20_03217 -2.0 -3.6 NADH-quinone oxidoreductase subunit B compare
MPMX20_03681 -2.0 -6.3 Amino-acid acetyltransferase compare
MPMX20_01030 -2.0 -5.3 Lon protease compare
MPMX20_04077 -2.0 -5.5 Argininosuccinate synthase compare
MPMX20_03338 -1.9 -2.7 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_04520 -1.9 -5.1 Argininosuccinate lyase compare
MPMX20_02307 -1.9 -1.9 hypothetical protein compare
MPMX20_04491 -1.9 -3.7 Thioredoxin 1 compare
MPMX20_01567 -1.9 -5.4 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_01355 -1.8 -1.0 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_01950 -1.8 -2.3 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_03020 -1.8 -4.8 hypothetical protein compare
MPMX20_04153 -1.8 -4.5 Ribonuclease G compare
MPMX20_03468 -1.8 -3.6 T-protein compare
MPMX20_01637 -1.8 -4.7 hypothetical protein compare
MPMX20_04625 -1.8 -1.8 Protein MioC compare
MPMX20_00873 -1.7 -1.8 Protein rof compare
MPMX20_00225 -1.7 -4.4 Phosphoribosylamine--glycine ligase compare
MPMX20_03407 -1.7 -3.2 Chaperone protein HscA compare
MPMX20_04650 -1.7 -2.9 tRNA modification GTPase MnmE compare
MPMX20_01098 -1.7 -3.1 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_03213 -1.7 -5.6 NADH-quinone oxidoreductase subunit G compare
MPMX20_03207 -1.7 -4.1 NADH-quinone oxidoreductase subunit M compare
MPMX20_03015 -1.7 -10.8 Phosphoglucosamine mutase compare
MPMX20_03047 -1.7 -3.0 dCTP deaminase compare
MPMX20_04170 -1.7 -1.8 DNA-binding protein Fis compare
MPMX20_03426 -1.7 -6.4 Phosphoribosylformylglycinamidine synthase compare
MPMX20_03267 -1.6 -2.1 Phosphohistidine phosphatase SixA compare
MPMX20_00093 -1.6 -3.9 Orotate phosphoribosyltransferase compare
MPMX20_02549 -1.6 -2.8 hypothetical protein compare
MPMX20_00577 -1.6 -6.2 hypothetical protein compare
MPMX20_03013 -1.6 -6.0 dTDP-glucose 4,6-dehydratase compare
MPMX20_00102 -1.6 -2.5 hypothetical protein compare
MPMX20_03012 -1.6 -6.2 Glucose-1-phosphate thymidylyltransferase 1 compare
MPMX20_02591 -1.6 -3.7 DNA-binding protein H-NS compare
MPMX20_04598 -1.6 -3.7 Oxygen-independent coproporphyrinogen III oxidase compare
MPMX20_00030 -1.6 -1.3 hypothetical protein compare
MPMX20_02494 -1.6 -3.7 Orotidine 5'-phosphate decarboxylase compare
MPMX20_03354 -1.6 -4.5 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_01607 -1.6 -2.5 Outer membrane protein A compare
MPMX20_03674 -1.5 -2.3 Sulfur acceptor protein CsdE compare
MPMX20_00927 -1.5 -6.3 Glutamate 5-kinase compare
MPMX20_04521 -1.5 -3.1 Acetylglutamate kinase compare
MPMX20_01101 -1.5 -2.0 Peptidyl-prolyl cis-trans isomerase B compare
MPMX20_02474 -1.5 -4.1 Peptide transport periplasmic protein SapA compare
MPMX20_03408 -1.5 -1.6 Co-chaperone protein HscB compare
MPMX20_01097 -1.5 -4.1 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_00580 -1.5 -4.2 Antirestriction protein KlcA compare
MPMX20_01566 -1.5 -5.8 Phosphoserine aminotransferase compare
MPMX20_00086 -1.5 -1.4 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_01734 -1.4 -4.5 Lipid A biosynthesis lauroyltransferase compare
MPMX20_04641 -1.4 -2.1 Phosphate transport system permease protein PstA compare
MPMX20_04523 -1.4 -4.7 Acetylornithine deacetylase compare
MPMX20_02693 -1.4 -1.2 hypothetical protein compare
MPMX20_00976 -1.4 -2.5 Pyrroline-5-carboxylate reductase compare
MPMX20_03247 -1.4 -3.3 Amidophosphoribosyltransferase compare
MPMX20_02757 -1.4 -2.7 Glucose-6-phosphate 1-dehydrogenase compare
MPMX20_04685 -1.4 -3.7 hypothetical protein compare
MPMX20_01005 -1.4 -1.5 Transcriptional repressor NrdR compare
MPMX20_00928 -1.4 -5.1 Gamma-glutamyl phosphate reductase compare
MPMX20_03005 -1.4 -4.2 Imidazole glycerol phosphate synthase subunit HisH compare
MPMX20_03216 -1.3 -4.5 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_02309 -1.3 -3.4 hypothetical protein compare
MPMX20_04298 -1.3 -1.4 hypothetical protein compare
MPMX20_01543 -1.3 -1.6 ATP-dependent Clp protease adapter protein ClpS compare
MPMX20_01616 -1.3 -1.1 Heat shock protein HspQ compare
MPMX20_04467 -1.3 -3.0 Diaminopimelate epimerase compare
MPMX20_04375 -1.3 -2.7 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_01484 -1.3 -2.4 HTH-type transcriptional regulator RcdA compare
MPMX20_02114 -1.3 -2.1 hypothetical protein compare
MPMX20_04385 -1.3 -3.2 hypothetical protein compare
MPMX20_04485 -1.3 -3.6 dTDP-fucosamine acetyltransferase compare
MPMX20_03771 -1.3 -5.2 D-3-phosphoglycerate dehydrogenase compare
MPMX20_04465 -1.3 -2.8 Tyrosine recombinase XerC compare
MPMX20_02542 -1.3 -1.7 HTH-type transcriptional activator RhaR compare
MPMX20_00556 -1.2 -3.9 Ornithine carbamoyltransferase subunit F compare
MPMX20_02477 -1.2 -2.4 Peptide transport system ATP-binding protein SapD compare
MPMX20_03208 -1.2 -2.9 NADH-quinone oxidoreductase subunit L compare
MPMX20_03154 -1.2 -4.2 Inner membrane protein YejM compare
MPMX20_00480 -1.2 -2.0 50S ribosomal protein L9 compare
MPMX20_03212 -1.2 -2.8 NADH-quinone oxidoreductase subunit H compare
MPMX20_00747 -1.2 -2.5 Ribosomal RNA small subunit methyltransferase A compare
MPMX20_02481 -1.2 -3.7 Right origin-binding protein compare
MPMX20_02708 -1.2 -4.7 Septum site-determining protein MinD compare
MPMX20_01357 -1.2 -2.7 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_04522 -1.2 -3.0 N-acetyl-gamma-glutamyl-phosphate reductase compare
MPMX20_04687 -1.2 -4.3 hypothetical protein compare
MPMX20_00735 -1.2 -3.2 hypothetical protein compare
MPMX20_03214 -1.2 -3.3 NADH-quinone oxidoreductase subunit F compare
MPMX20_00544 -1.2 -3.0 Aspartate carbamoyltransferase catalytic subunit compare
MPMX20_04595 -1.2 -1.1 Glutamine synthetase compare
MPMX20_01983 -1.2 -2.4 Glutaredoxin 4 compare
MPMX20_00773 -1.2 -4.3 Catabolite repressor/activator compare
MPMX20_03016 -1.2 -7.2 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_00241 -1.2 -3.8 Glucose-6-phosphate isomerase compare
MPMX20_04374 -1.2 -1.0 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_02827 -1.1 -2.8 hypothetical protein compare
MPMX20_03323 -1.1 -1.7 Oxygen-dependent coproporphyrinogen-III oxidase compare
MPMX20_03095 -1.1 -0.8 hypothetical protein compare
MPMX20_04482 -1.1 -4.1 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase compare
MPMX20_03278 -1.1 -2.2 hypothetical protein compare
MPMX20_03694 -1.1 -2.7 DNA mismatch repair protein MutH compare
MPMX20_04276 -1.1 -3.0 DNA adenine methylase compare
MPMX20_01680 -1.1 -3.7 PTS system glucose-specific EIICB component compare
MPMX20_02574 -1.1 -1.7 putative intracellular septation protein A compare
MPMX20_03037 -1.1 -2.9 hypothetical protein compare
MPMX20_02204 -1.1 -2.7 hypothetical protein compare
MPMX20_01349 -1.1 -2.8 Citrate synthase compare
MPMX20_04008 -1.1 -1.9 Inner membrane protein YqjE compare
MPMX20_02593 -1.1 -6.2 Regulator of RpoS compare
MPMX20_03850 -1.1 -2.0 Biopolymer transport protein ExbD compare
MPMX20_00570 -1.1 -5.8 putative BsuMI modification methylase subunit YdiO compare
MPMX20_01106 -1.1 -1.4 putative protein YbcJ compare
MPMX20_01750 -1.0 -2.5 Negative regulator of flagellin synthesis compare
MPMX20_03939 -1.0 -1.0 hypothetical protein compare
MPMX20_04570 -1.0 -3.5 HTH-type transcriptional regulator SutR compare
MPMX20_04577 -1.0 -2.6 Formate dehydrogenase-O iron-sulfur subunit compare


Specific Phenotypes

None in this experiment

For Enterobacter sp. TBS_079 in carbon source experiments

For carbon source Sodium Formate across organisms