Experiment set9S320 for Enterobacter sp. TBS_079

Compare to:

Sodium propionate carbon source

200 most important genes:

  gene name fitness t score description  
MPMX20_03986 -6.6 -3.2 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_00831 -6.1 -3.9 RNA polymerase-binding transcription factor DksA compare
MPMX20_01153 -6.1 -3.1 HTH-type transcriptional activator RhaS compare
MPMX20_00086 -5.8 -4.0 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_00998 -5.5 -2.8 Sec translocon accessory complex subunit YajC compare
MPMX20_03215 -5.1 -2.9 NADH-quinone oxidoreductase subunit E compare
MPMX20_04541 -5.0 -2.6 Cell division protein ZapB compare
MPMX20_01286 -4.7 -1.6 Sec-independent protein translocase protein TatE compare
MPMX20_01974 -4.6 -1.3 Riboflavin synthase compare
MPMX20_02646 -4.4 -1.7 hypothetical protein compare
MPMX20_00388 -4.2 -0.8 hypothetical protein compare
MPMX20_01361 -4.2 -7.0 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_01362 -4.2 -2.9 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_03509 -4.1 -1.2 hypothetical protein compare
MPMX20_04427 -4.0 -0.8 5S ribosomal RNA compare
MPMX20_00749 -3.9 -5.0 Chaperone SurA compare
MPMX20_03498 -3.9 -2.0 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_01901 -3.8 -1.7 Integration host factor subunit alpha compare
MPMX20_01549 -3.8 -2.6 ATP-binding/permease protein CydD compare
MPMX20_03409 -3.8 -2.0 Iron-binding protein IscA compare
MPMX20_01548 -3.7 -5.1 putative ABC transporter ATP-binding/permease protein compare
MPMX20_01984 -3.7 -1.8 Ribonuclease T compare
MPMX20_02574 -3.7 -2.5 putative intracellular septation protein A compare
MPMX20_04628 -3.7 -2.1 ATP synthase protein I compare
MPMX20_00453 -3.6 -1.6 RNA-binding protein Hfq compare
MPMX20_01020 -3.6 -1.0 Cytochrome bo(3) ubiquinol oxidase subunit 4 compare
MPMX20_00720 -3.6 -1.2 Chaperone protein DnaK compare
MPMX20_02826 -3.5 -1.9 Cold shock-like protein CspB compare
MPMX20_00764 -3.5 -1.2 hypothetical protein compare
MPMX20_03301 -3.5 -2.1 hypothetical protein compare
MPMX20_01369 -3.4 -7.2 Tol-Pal system protein TolB compare
MPMX20_01446 -3.4 -2.2 Small protein MntS compare
MPMX20_02477 -3.3 -2.3 Peptide transport system ATP-binding protein SapD compare
MPMX20_00176 -3.3 -4.8 Cold shock protein CspA compare
MPMX20_02393 -3.3 -0.9 hypothetical protein compare
MPMX20_01029 -3.3 -2.3 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_00106 -3.2 -2.2 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_00745 -3.2 -4.8 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_03022 -3.2 -2.2 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_03490 -3.2 -4.4 SsrA-binding protein compare
MPMX20_04028 -3.1 -1.9 hypothetical protein compare
MPMX20_03408 -3.1 -1.6 Co-chaperone protein HscB compare
MPMX20_01028 -3.1 -1.9 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_04440 -3.1 -1.2 Transcription antitermination protein RfaH compare
MPMX20_02732 -3.0 -2.4 PhoP/PhoQ regulator MgrB compare
MPMX20_00087 -3.0 -2.5 DNA-directed RNA polymerase subunit omega compare
MPMX20_04119 -2.9 -1.5 DNA polymerase III subunit chi compare
MPMX20_03923 -2.9 -1.9 hypothetical protein compare
MPMX20_04443 -2.9 -2.8 Sec-independent protein translocase protein TatB compare
MPMX20_00747 -2.9 -5.5 Ribosomal RNA small subunit methyltransferase A compare
MPMX20_01607 -2.9 -3.6 Outer membrane protein A compare
MPMX20_03213 -2.9 -8.8 NADH-quinone oxidoreductase subunit G compare
MPMX20_00639 -2.9 -2.4 5-carboxymethyl-2-hydroxymuconate Delta-isomerase compare
MPMX20_03267 -2.8 -2.7 Phosphohistidine phosphatase SixA compare
MPMX20_00105 -2.8 -8.7 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_03435 -2.8 -2.0 Pyridoxine 5'-phosphate synthase compare
MPMX20_04316 -2.8 -4.2 hypothetical protein compare
MPMX20_04469 -2.7 -3.4 Adenylate cyclase compare
MPMX20_00110 -2.6 -12.1 hypothetical protein compare
MPMX20_02204 -2.6 -6.1 hypothetical protein compare
MPMX20_03018 -2.6 -4.9 hypothetical protein compare
MPMX20_03017 -2.5 -6.8 hypothetical protein compare
MPMX20_03382 -2.5 -1.7 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_04253 -2.5 -0.7 Malonate decarboxylase acyl carrier protein compare
MPMX20_02827 -2.5 -5.0 hypothetical protein compare
MPMX20_04768 -2.5 -13.7 hypothetical protein compare
MPMX20_02591 -2.4 -3.9 DNA-binding protein H-NS compare
MPMX20_00107 -2.4 -5.5 Lipopolysaccharide core heptosyltransferase RfaQ compare
MPMX20_03019 -2.4 -11.5 hypothetical protein compare
MPMX20_04639 -2.4 -0.8 Phosphate-binding protein PstS compare
MPMX20_03208 -2.4 -4.8 NADH-quinone oxidoreductase subunit L compare
MPMX20_04110 -2.3 -3.7 Nitrogen regulatory protein compare
MPMX20_00093 -2.3 -5.3 Orotate phosphoribosyltransferase compare
MPMX20_04375 -2.3 -4.5 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_00109 -2.3 -11.4 hypothetical protein compare
MPMX20_03010 -2.2 -6.0 UDP-glucose 4-epimerase compare
MPMX20_04197 -2.2 -5.6 Trk system potassium uptake protein TrkA compare
MPMX20_02549 -2.2 -2.8 hypothetical protein compare
MPMX20_03012 -2.2 -7.8 Glucose-1-phosphate thymidylyltransferase 1 compare
MPMX20_03013 -2.2 -8.8 dTDP-glucose 4,6-dehydratase compare
MPMX20_02275 -2.2 -2.5 Acetyltransferase compare
MPMX20_03683 -2.1 -3.8 RecBCD enzyme subunit RecB compare
MPMX20_03440 -2.1 -4.2 Elongation factor 4 compare
MPMX20_03214 -2.1 -4.1 NADH-quinone oxidoreductase subunit F compare
MPMX20_00455 -2.1 -5.0 Modulator of FtsH protease HflK compare
MPMX20_01098 -2.1 -3.3 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_01765 -2.1 -3.1 Ribonuclease E compare
MPMX20_01334 -2.0 -4.8 Phosphoglucomutase compare
MPMX20_01567 -2.0 -4.1 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_04625 -2.0 -1.8 Protein MioC compare
MPMX20_04559 -2.0 -1.9 Superoxide dismutase [Mn] compare
MPMX20_04532 -2.0 -1.6 Met repressor compare
MPMX20_04463 -1.9 -5.0 DNA helicase II compare
MPMX20_03407 -1.9 -3.0 Chaperone protein HscA compare
MPMX20_03209 -1.9 -1.4 NADH-quinone oxidoreductase subunit K compare
MPMX20_04170 -1.9 -1.1 DNA-binding protein Fis compare
MPMX20_01596 -1.9 -10.6 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_02768 -1.9 -1.5 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_04650 -1.9 -3.2 tRNA modification GTPase MnmE compare
MPMX20_01734 -1.9 -4.9 Lipid A biosynthesis lauroyltransferase compare
MPMX20_01368 -1.8 -2.3 hypothetical protein compare
MPMX20_01364 -1.8 -1.8 hypothetical protein compare
MPMX20_03685 -1.8 -4.9 RecBCD enzyme subunit RecC compare
MPMX20_01101 -1.8 -2.0 Peptidyl-prolyl cis-trans isomerase B compare
MPMX20_00666 -1.8 -1.2 tRNA-Leu compare
MPMX20_00807 -1.8 -2.7 Pyruvate dehydrogenase E1 component compare
MPMX20_01021 -1.8 -2.3 Cytochrome bo(3) ubiquinol oxidase subunit 3 compare
MPMX20_04483 -1.8 -2.7 Lipid III flippase compare
MPMX20_02749 -1.8 -2.7 DNA polymerase III subunit theta compare
MPMX20_01950 -1.8 -2.5 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_02766 -1.8 -2.4 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_01030 -1.8 -4.2 Lon protease compare
MPMX20_02635 -1.7 -1.6 Release factor glutamine methyltransferase compare
MPMX20_00055 -1.7 -2.2 hypothetical protein compare
MPMX20_01005 -1.7 -1.4 Transcriptional repressor NrdR compare
MPMX20_01394 -1.7 -4.8 6-phosphogluconolactonase compare
MPMX20_02475 -1.7 -3.1 Putrescine export system permease protein SapB compare
MPMX20_02685 -1.7 -3.2 hypothetical protein compare
MPMX20_00801 -1.7 -1.4 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
MPMX20_03882 -1.7 -4.6 Outer membrane protein TolC compare
MPMX20_04546 -1.7 -1.8 hypothetical protein compare
MPMX20_03391 -1.6 -1.2 hypothetical protein compare
MPMX20_03338 -1.6 -2.2 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_04003 -1.6 -2.2 Putative L-lactate dehydrogenase operon regulatory protein compare
MPMX20_02767 -1.6 -2.4 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_03426 -1.6 -5.6 Phosphoribosylformylglycinamidine synthase compare
MPMX20_03216 -1.6 -5.4 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_01566 -1.6 -4.6 Phosphoserine aminotransferase compare
MPMX20_03390 -1.6 -3.1 Outer membrane protein assembly factor BamB compare
MPMX20_02598 -1.6 -1.0 tRNA-Tyr compare
MPMX20_03020 -1.6 -3.5 hypothetical protein compare
MPMX20_02535 -1.6 -1.3 Pyrimidine-specific ribonucleoside hydrolase RihB compare
MPMX20_01967 -1.6 -1.5 hypothetical protein compare
MPMX20_02494 -1.6 -3.2 Orotidine 5'-phosphate decarboxylase compare
MPMX20_00213 -1.6 -1.3 Thiazole synthase compare
MPMX20_02116 -1.6 -1.8 hypothetical protein compare
MPMX20_03253 -1.6 -2.4 tRNA pseudouridine synthase A compare
MPMX20_03310 -1.6 -2.9 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_01322 -1.5 -3.7 N-acetylglucosamine repressor compare
MPMX20_01963 -1.5 -2.2 hypothetical protein compare
MPMX20_04489 -1.5 -6.6 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_03210 -1.5 -2.4 NADH-quinone oxidoreductase subunit J compare
MPMX20_01741 -1.5 -3.1 Dihydroorotase compare
MPMX20_03773 -1.5 -2.2 HTH-type transcriptional regulator ArgP compare
MPMX20_03309 -1.5 -1.6 Phosphocarrier protein HPr compare
MPMX20_04462 -1.5 -2.1 Magnesium transport protein CorA compare
MPMX20_00108 -1.5 -7.4 hypothetical protein compare
MPMX20_01366 -1.5 -2.5 Tol-Pal system protein TolQ compare
MPMX20_01367 -1.5 -3.0 Tol-Pal system protein TolR compare
MPMX20_02593 -1.5 -6.6 Regulator of RpoS compare
MPMX20_03153 -1.5 -1.2 hypothetical protein compare
MPMX20_03016 -1.5 -7.3 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_00241 -1.5 -4.7 Glucose-6-phosphate isomerase compare
MPMX20_04718 -1.5 -7.0 Antirestriction protein KlcA compare
MPMX20_04301 -1.5 -1.6 Fe/S biogenesis protein NfuA compare
MPMX20_01363 -1.5 -3.3 Cytochrome bd-I ubiquinol oxidase subunit X compare
MPMX20_03354 -1.5 -3.1 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_00557 -1.5 -3.3 Regulator of ribonuclease activity B compare
MPMX20_01118 -1.5 -0.7 hypothetical protein compare
MPMX20_03264 -1.5 -2.0 Chorismate synthase compare
MPMX20_03763 -1.4 -2.1 Glycine cleavage system H protein compare
MPMX20_01365 -1.4 -2.0 Acyl-CoA thioester hydrolase YbgC compare
MPMX20_03047 -1.4 -2.5 dCTP deaminase compare
MPMX20_00556 -1.4 -3.1 Ornithine carbamoyltransferase subunit F compare
MPMX20_02716 -1.4 -1.6 hypothetical protein compare
MPMX20_03304 -1.4 -1.7 hypothetical protein compare
MPMX20_03135 -1.4 -2.1 hypothetical protein compare
MPMX20_04484 -1.4 -3.3 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
MPMX20_01380 -1.4 -1.3 hypothetical protein compare
MPMX20_00226 -1.4 -3.6 Bifunctional purine biosynthesis protein PurH compare
MPMX20_00428 -1.4 -1.3 hypothetical protein compare
MPMX20_02344 -1.4 -0.8 hypothetical protein compare
MPMX20_02309 -1.4 -3.0 hypothetical protein compare
MPMX20_03094 -1.4 -1.9 HTH-type transcriptional regulator MlrA compare
MPMX20_03021 -1.4 -4.2 hypothetical protein compare
MPMX20_03211 -1.3 -1.7 NADH-quinone oxidoreductase subunit I compare
MPMX20_00102 -1.3 -1.7 hypothetical protein compare
MPMX20_04442 -1.3 -2.3 Sec-independent protein translocase protein TatC compare
MPMX20_00746 -1.3 -1.5 Protein ApaG compare
MPMX20_04466 -1.3 -2.0 hypothetical protein compare
MPMX20_03479 -1.3 -0.9 30S ribosomal protein S16 compare
MPMX20_03015 -1.3 -7.9 Phosphoglucosamine mutase compare
MPMX20_03212 -1.3 -2.3 NADH-quinone oxidoreductase subunit H compare
MPMX20_02912 -1.3 -0.7 hypothetical protein compare
MPMX20_00514 -1.3 -3.4 Fructose-1,6-bisphosphatase class 1 compare
MPMX20_02822 -1.3 -2.8 hypothetical protein compare
MPMX20_01354 -1.3 -1.2 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_01552 -1.3 -3.3 hypothetical protein compare
MPMX20_01606 -1.3 -2.3 Macrodomain Ter protein compare
MPMX20_04626 -1.3 -2.3 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_04133 -1.3 -1.8 Stringent starvation protein A compare
MPMX20_02478 -1.3 -3.4 Putrescine export system ATP-binding protein SapF compare
MPMX20_04189 -1.3 -2.6 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_00633 -1.3 -3.8 4-hydroxyphenylacetate 3-monooxygenase reductase component compare
MPMX20_04077 -1.3 -3.6 Argininosuccinate synthase compare
MPMX20_01695 -1.3 -1.2 putative malonic semialdehyde reductase RutE compare
MPMX20_03770 -1.3 -1.8 5-formyltetrahydrofolate cyclo-ligase compare
MPMX20_02542 -1.3 -2.1 HTH-type transcriptional activator RhaR compare
MPMX20_04598 -1.2 -2.9 Oxygen-independent coproporphyrinogen III oxidase compare
MPMX20_02312 -1.2 -1.9 hypothetical protein compare


Specific Phenotypes

For 2 genes in this experiment

For carbon source Sodium propionate in Enterobacter sp. TBS_079

For carbon source Sodium propionate across organisms