Experiment set9S318 for Enterobacter sp. TBS_079

Compare to:

Sodium pyruvate carbon source

200 most important genes:

  gene name fitness t score description  
MPMX20_00831 -6.9 -4.8 RNA polymerase-binding transcription factor DksA compare
MPMX20_03338 -6.3 -4.4 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_00544 -6.2 -4.3 Aspartate carbamoyltransferase catalytic subunit compare
MPMX20_04520 -6.0 -5.8 Argininosuccinate lyase compare
MPMX20_00693 -5.9 -11.4 Phosphoserine phosphatase compare
MPMX20_03468 -5.8 -6.9 T-protein compare
MPMX20_00928 -5.8 -12.4 Gamma-glutamyl phosphate reductase compare
MPMX20_04077 -5.7 -11.0 Argininosuccinate synthase compare
MPMX20_01566 -5.5 -14.8 Phosphoserine aminotransferase compare
MPMX20_03354 -5.3 -11.7 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_03771 -5.3 -13.0 D-3-phosphoglycerate dehydrogenase compare
MPMX20_00773 -5.3 -14.4 Catabolite repressor/activator compare
MPMX20_01098 -5.2 -7.1 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_00225 -5.2 -12.1 Phosphoribosylamine--glycine ligase compare
MPMX20_01567 -5.2 -5.1 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_00739 -5.1 -3.5 Carbamoyl-phosphate synthase small chain compare
MPMX20_01349 -5.1 -6.1 Citrate synthase compare
MPMX20_04443 -5.0 -4.9 Sec-independent protein translocase protein TatB compare
MPMX20_03018 -5.0 -3.5 hypothetical protein compare
MPMX20_03426 -5.0 -18.2 Phosphoribosylformylglycinamidine synthase compare
MPMX20_04189 -4.9 -4.8 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_03264 -4.9 -7.4 Chorismate synthase compare
MPMX20_00226 -4.8 -12.0 Bifunctional purine biosynthesis protein PurH compare
MPMX20_01097 -4.7 -9.1 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_01741 -4.7 -6.5 Dihydroorotase compare
MPMX20_00514 -4.7 -5.6 Fructose-1,6-bisphosphatase class 1 compare
MPMX20_04442 -4.7 -7.8 Sec-independent protein translocase protein TatC compare
MPMX20_04523 -4.6 -10.3 Acetylornithine deacetylase compare
MPMX20_01548 -4.6 -5.4 putative ABC transporter ATP-binding/permease protein compare
MPMX20_03007 -4.5 -10.1 Imidazole glycerol phosphate synthase subunit HisF compare
MPMX20_01368 -4.5 -8.1 hypothetical protein compare
MPMX20_03006 -4.5 -9.2 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX20_01596 -4.5 -24.1 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_00712 -4.5 -14.4 Threonine synthase compare
MPMX20_03004 -4.5 -12.6 Histidine biosynthesis bifunctional protein HisB compare
MPMX20_04521 -4.5 -9.6 Acetylglutamate kinase compare
MPMX20_04499 -4.5 -17.5 Dihydroxy-acid dehydratase compare
MPMX20_04162 -4.5 -5.3 3-dehydroquinate dehydratase compare
MPMX20_03247 -4.5 -11.5 Amidophosphoribosyltransferase compare
MPMX20_00093 -4.4 -8.5 Orotate phosphoribosyltransferase compare
MPMX20_01369 -4.4 -13.0 Tol-Pal system protein TolB compare
MPMX20_00927 -4.4 -14.9 Glutamate 5-kinase compare
MPMX20_04444 -4.4 -2.2 Sec-independent protein translocase protein TatA compare
MPMX20_00740 -4.4 -12.4 Carbamoyl-phosphate synthase large chain compare
MPMX20_01362 -4.4 -6.0 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_00711 -4.4 -15.8 Homoserine kinase compare
MPMX20_04522 -4.4 -9.7 N-acetyl-gamma-glutamyl-phosphate reductase compare
MPMX20_01549 -4.3 -4.2 ATP-binding/permease protein CydD compare
MPMX20_01361 -4.3 -9.9 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_04496 -4.3 -9.5 Ketol-acid reductoisomerase (NADP(+)) compare
MPMX20_02494 -4.2 -10.5 Orotidine 5'-phosphate decarboxylase compare
MPMX20_01950 -4.2 -5.0 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_04524 -4.2 -18.9 Phosphoenolpyruvate carboxylase compare
MPMX20_04278 -4.1 -4.9 3-dehydroquinate synthase compare
MPMX20_03019 -4.1 -19.5 hypothetical protein compare
MPMX20_04650 -4.1 -4.0 tRNA modification GTPase MnmE compare
MPMX20_03986 -4.1 -5.3 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_03681 -4.0 -15.0 Amino-acid acetyltransferase compare
MPMX20_02574 -4.0 -3.9 putative intracellular septation protein A compare
MPMX20_01028 -4.0 -2.7 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_00102 -3.9 -2.7 hypothetical protein compare
MPMX20_04275 -3.8 -2.6 Ribulose-phosphate 3-epimerase compare
MPMX20_04531 -3.8 -9.7 Cystathionine gamma-synthase compare
MPMX20_01366 -3.8 -8.3 Tol-Pal system protein TolQ compare
MPMX20_04119 -3.8 -2.6 DNA polymerase III subunit chi compare
MPMX20_04497 -3.8 -10.5 HTH-type transcriptional regulator GltC compare
MPMX20_00106 -3.7 -5.6 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_01922 -3.6 -17.5 Phosphoenolpyruvate synthase conserved
MPMX20_03022 -3.6 -4.3 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_04483 -3.6 -3.5 Lipid III flippase compare
MPMX20_00710 -3.5 -16.0 Bifunctional aspartokinase/homoserine dehydrogenase 1 compare
MPMX20_00556 -3.4 -10.4 Ornithine carbamoyltransferase subunit F compare
MPMX20_01367 -3.4 -9.8 Tol-Pal system protein TolR compare
MPMX20_03003 -3.4 -11.0 Histidinol-phosphate aminotransferase compare
MPMX20_03001 -3.4 -13.5 ATP phosphoribosyltransferase compare
MPMX20_04626 -3.4 -5.1 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_03002 -3.3 -12.1 Histidinol dehydrogenase compare
MPMX20_01370 -3.3 -7.9 Peptidoglycan-associated lipoprotein compare
MPMX20_00976 -3.2 -5.1 Pyrroline-5-carboxylate reductase compare
MPMX20_04768 -3.2 -13.9 hypothetical protein compare
MPMX20_03685 -3.2 -3.8 RecBCD enzyme subunit RecC compare
MPMX20_03218 -3.2 -4.6 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_02768 -3.2 -4.1 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_00230 -3.2 -7.3 Homoserine O-succinyltransferase compare
MPMX20_01029 -3.1 -5.2 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_03010 -3.1 -8.6 UDP-glucose 4-epimerase compare
MPMX20_03852 -3.1 -13.4 Cystathionine beta-lyase MetC compare
MPMX20_00110 -3.1 -18.4 hypothetical protein compare
MPMX20_04595 -3.0 -2.9 Glutamine synthetase compare
MPMX20_03382 -3.0 -2.9 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_03005 -3.0 -9.5 Imidazole glycerol phosphate synthase subunit HisH compare
MPMX20_02513 -3.0 -13.4 Tryptophan synthase beta chain compare
MPMX20_00105 -3.0 -14.2 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_03013 -3.0 -13.3 dTDP-glucose 4,6-dehydratase compare
MPMX20_03683 -2.9 -4.9 RecBCD enzyme subunit RecB compare
MPMX20_03021 -2.9 -9.8 hypothetical protein compare
MPMX20_04197 -2.9 -6.8 Trk system potassium uptake protein TrkA compare
MPMX20_01354 -2.9 -4.0 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_00807 -2.9 -2.8 Pyruvate dehydrogenase E1 component compare
MPMX20_02591 -2.9 -7.1 DNA-binding protein H-NS compare
MPMX20_00109 -2.9 -19.9 hypothetical protein compare
MPMX20_03466 -2.8 -7.5 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX20_01355 -2.8 -1.7 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_04140 -2.8 -10.3 Malate dehydrogenase compare
MPMX20_04469 -2.8 -4.8 Adenylate cyclase compare
MPMX20_02512 -2.8 -10.1 Tryptophan biosynthesis protein TrpCF compare
MPMX20_01030 -2.8 -10.1 Lon protease compare
MPMX20_03132 -2.7 -9.0 Tagatose-6-phosphate kinase compare
MPMX20_04110 -2.7 -5.3 Nitrogen regulatory protein compare
MPMX20_02514 -2.6 -7.8 Tryptophan synthase alpha chain compare
MPMX20_04489 -2.6 -14.2 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_02478 -2.5 -9.1 Putrescine export system ATP-binding protein SapF compare
MPMX20_01334 -2.5 -8.4 Phosphoglucomutase compare
MPMX20_00747 -2.5 -5.9 Ribosomal RNA small subunit methyltransferase A compare
MPMX20_01607 -2.4 -4.1 Outer membrane protein A compare
MPMX20_02593 -2.4 -15.5 Regulator of RpoS compare
MPMX20_03212 -2.4 -6.7 NADH-quinone oxidoreductase subunit H compare
MPMX20_04639 -2.4 -2.1 Phosphate-binding protein PstS compare
MPMX20_02734 -2.4 -10.2 Transcriptional regulator KdgR compare
MPMX20_04530 -2.4 -10.7 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_03490 -2.4 -5.9 SsrA-binding protein compare
MPMX20_04440 -2.4 -2.0 Transcription antitermination protein RfaH compare
MPMX20_03012 -2.4 -12.2 Glucose-1-phosphate thymidylyltransferase 1 compare
MPMX20_02510 -2.3 -13.3 Anthranilate synthase component 1 compare
MPMX20_03207 -2.3 -7.1 NADH-quinone oxidoreductase subunit M compare
MPMX20_01356 -2.3 -8.7 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_00767 -2.3 -7.6 3-isopropylmalate dehydratase large subunit 1 compare
MPMX20_00766 -2.3 -8.7 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_03008 -2.3 -5.4 Histidine biosynthesis bifunctional protein HisIE compare
MPMX20_00998 -2.3 -5.0 Sec translocon accessory complex subunit YajC compare
MPMX20_03211 -2.2 -4.7 NADH-quinone oxidoreductase subunit I compare
MPMX20_00812 -2.2 -8.3 Aconitate hydratase B compare
MPMX20_03267 -2.2 -4.2 Phosphohistidine phosphatase SixA compare
MPMX20_03215 -2.2 -4.5 NADH-quinone oxidoreductase subunit E compare
MPMX20_03290 -2.2 -2.3 tRNA-Ala compare
MPMX20_02496 -2.2 -2.3 Lipopolysaccharide assembly protein A compare
MPMX20_03210 -2.2 -7.2 NADH-quinone oxidoreductase subunit J compare
MPMX20_03206 -2.1 -8.9 NADH-quinone oxidoreductase subunit N compare
MPMX20_01552 -2.1 -5.6 hypothetical protein compare
MPMX20_03214 -2.1 -7.9 NADH-quinone oxidoreductase subunit F compare
MPMX20_03208 -2.1 -6.2 NADH-quinone oxidoreductase subunit L compare
MPMX20_03216 -2.1 -11.1 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_01551 -2.0 -6.7 Leucine-responsive regulatory protein compare
MPMX20_04465 -2.0 -5.6 Tyrosine recombinase XerC compare
MPMX20_02475 -2.0 -5.6 Putrescine export system permease protein SapB compare
MPMX20_00768 -2.0 -9.4 3-isopropylmalate dehydrogenase compare
MPMX20_00241 -2.0 -9.1 Glucose-6-phosphate isomerase compare
MPMX20_03407 -1.9 -4.5 Chaperone protein HscA compare
MPMX20_02511 -1.9 -8.9 Bifunctional protein TrpGD compare
MPMX20_02645 -1.9 -7.4 Ribosome-binding ATPase YchF compare
MPMX20_04640 -1.9 -2.8 Phosphate transport system permease protein PstC compare
MPMX20_03020 -1.8 -6.4 hypothetical protein compare
MPMX20_03217 -1.8 -6.2 NADH-quinone oxidoreductase subunit B compare
MPMX20_01550 -1.8 -3.2 Thioredoxin reductase compare
MPMX20_00108 -1.8 -12.1 hypothetical protein compare
MPMX20_02476 -1.8 -3.1 Putrescine export system permease protein SapC compare
MPMX20_00745 -1.8 -4.2 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_01972 -1.8 -1.4 tRNA-Val compare
MPMX20_01156 -1.8 -5.1 hypothetical protein compare
MPMX20_04498 -1.8 -6.7 L-threonine dehydratase biosynthetic IlvA compare
MPMX20_02477 -1.7 -4.5 Peptide transport system ATP-binding protein SapD compare
MPMX20_02701 -1.7 -3.1 Fatty acid metabolism regulator protein compare
MPMX20_04557 -1.7 -5.9 Sensor histidine kinase CpxA compare
MPMX20_03469 -1.7 -7.7 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive compare
MPMX20_01586 -1.7 -7.1 Aspartate aminotransferase compare
MPMX20_00769 -1.7 -8.6 2-isopropylmalate synthase compare
MPMX20_02766 -1.7 -4.3 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_03213 -1.7 -8.5 NADH-quinone oxidoreductase subunit G compare
MPMX20_04133 -1.7 -6.0 Stringent starvation protein A compare
MPMX20_03017 -1.6 -7.4 hypothetical protein compare
MPMX20_02767 -1.6 -3.2 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_03641 -1.6 -5.1 Phosphoadenosine phosphosulfate reductase compare
MPMX20_04532 -1.6 -1.9 Met repressor compare
MPMX20_03479 -1.6 -2.4 30S ribosomal protein S16 compare
MPMX20_04642 -1.5 -1.8 Phosphate import ATP-binding protein PstB compare
MPMX20_01901 -1.5 -1.8 Integration host factor subunit alpha compare
MPMX20_02672 -1.5 -11.9 hypothetical protein compare
MPMX20_00708 -1.5 -4.1 Aerobic respiration control protein ArcA compare
MPMX20_00570 -1.5 -9.9 putative BsuMI modification methylase subunit YdiO compare
MPMX20_01351 -1.5 -3.5 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_03642 -1.5 -7.9 Sulfite reductase [NADPH] hemoprotein beta-component compare
MPMX20_01101 -1.5 -3.0 Peptidyl-prolyl cis-trans isomerase B compare
MPMX20_03753 -1.5 -4.4 Tyrosine recombinase XerD compare
MPMX20_02309 -1.5 -4.6 hypothetical protein compare
MPMX20_01722 -1.5 -2.0 putative csgAB operon transcriptional regulatory protein compare
MPMX20_00721 -1.4 -3.0 Chaperone protein DnaJ compare
MPMX20_04585 -1.4 -4.8 HTH-type transcriptional repressor CsqR compare
MPMX20_02307 -1.4 -2.6 hypothetical protein compare
MPMX20_03209 -1.4 -2.9 NADH-quinone oxidoreductase subunit K compare
MPMX20_00453 -1.4 -1.4 RNA-binding protein Hfq compare
MPMX20_01969 -1.3 -4.1 Carbonic anhydrase 1 compare
MPMX20_01734 -1.3 -5.3 Lipid A biosynthesis lauroyltransferase compare
MPMX20_01357 -1.3 -3.7 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_03227 -1.3 -4.8 Phosphate acetyltransferase compare
MPMX20_02635 -1.3 -2.6 Release factor glutamine methyltransferase compare
MPMX20_00086 -1.3 -2.5 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_00258 -1.3 -3.9 Diacylglycerol kinase compare
MPMX20_04692 -1.3 -1.1 hypothetical protein compare
MPMX20_02826 -1.3 -1.6 Cold shock-like protein CspB compare
MPMX20_04141 -1.3 -4.4 Arginine repressor compare


Specific Phenotypes

For 2 genes in this experiment

For carbon source Sodium pyruvate in Enterobacter sp. TBS_079

For carbon source Sodium pyruvate across organisms