Experiment set9S314 for Enterobacter sp. TBS_079

Compare to:

Citric Acid carbon source

200 most important genes:

  gene name fitness t score description  
MPMX20_01366 -6.6 -4.6 Tol-Pal system protein TolQ compare
MPMX20_01566 -6.3 -13.5 Phosphoserine aminotransferase compare
MPMX20_03986 -6.2 -5.4 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_04077 -6.2 -6.1 Argininosuccinate synthase compare
MPMX20_03338 -6.2 -4.2 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_00693 -6.1 -10.1 Phosphoserine phosphatase compare
MPMX20_01368 -6.0 -5.9 hypothetical protein compare
MPMX20_03247 -6.0 -7.1 Amidophosphoribosyltransferase compare
MPMX20_03264 -5.9 -4.1 Chorismate synthase compare
MPMX20_01098 -5.8 -5.6 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_00831 -5.8 -6.9 RNA polymerase-binding transcription factor DksA compare
MPMX20_00226 -5.7 -6.8 Bifunctional purine biosynthesis protein PurH compare
MPMX20_03771 -5.7 -12.7 D-3-phosphoglycerate dehydrogenase compare
MPMX20_00544 -5.6 -7.7 Aspartate carbamoyltransferase catalytic subunit compare
MPMX20_03209 -5.6 -3.8 NADH-quinone oxidoreductase subunit K compare
MPMX20_03354 -5.6 -12.7 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_04521 -5.5 -6.6 Acetylglutamate kinase compare
MPMX20_01369 -5.5 -10.5 Tol-Pal system protein TolB compare
MPMX20_04520 -5.5 -7.5 Argininosuccinate lyase compare
MPMX20_00230 -5.5 -8.3 Homoserine O-succinyltransferase compare
MPMX20_00740 -5.4 -6.5 Carbamoyl-phosphate synthase large chain compare
MPMX20_04162 -5.3 -3.7 3-dehydroquinate dehydratase compare
MPMX20_03426 -5.3 -16.7 Phosphoribosylformylglycinamidine synthase compare
MPMX20_02494 -5.3 -6.3 Orotidine 5'-phosphate decarboxylase compare
MPMX20_03005 -5.2 -7.1 Imidazole glycerol phosphate synthase subunit HisH compare
MPMX20_00225 -5.1 -11.9 Phosphoribosylamine--glycine ligase compare
MPMX20_00711 -5.1 -13.5 Homoserine kinase compare
MPMX20_01355 -5.0 -1.5 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_01950 -5.0 -3.5 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_03215 -5.0 -4.9 NADH-quinone oxidoreductase subunit E compare
MPMX20_03007 -5.0 -9.6 Imidazole glycerol phosphate synthase subunit HisF compare
MPMX20_04499 -5.0 -15.0 Dihydroxy-acid dehydratase compare
MPMX20_00773 -5.0 -14.7 Catabolite repressor/activator compare
MPMX20_03006 -5.0 -10.1 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX20_01596 -5.0 -17.1 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_04522 -5.0 -8.3 N-acetyl-gamma-glutamyl-phosphate reductase compare
MPMX20_00927 -5.0 -17.5 Glutamate 5-kinase compare
MPMX20_01567 -4.9 -5.9 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_00928 -4.9 -14.4 Gamma-glutamyl phosphate reductase compare
MPMX20_03004 -4.9 -12.2 Histidine biosynthesis bifunctional protein HisB compare
MPMX20_01548 -4.9 -3.4 putative ABC transporter ATP-binding/permease protein compare
MPMX20_04496 -4.9 -6.7 Ketol-acid reductoisomerase (NADP(+)) compare
MPMX20_01741 -4.9 -4.7 Dihydroorotase compare
MPMX20_03218 -4.8 -5.7 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_03681 -4.8 -15.7 Amino-acid acetyltransferase compare
MPMX20_00739 -4.8 -4.7 Carbamoyl-phosphate synthase small chain compare
MPMX20_00712 -4.7 -13.3 Threonine synthase compare
MPMX20_01367 -4.7 -9.0 Tol-Pal system protein TolR compare
MPMX20_04523 -4.7 -11.3 Acetylornithine deacetylase compare
MPMX20_04189 -4.6 -5.5 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_00093 -4.6 -6.4 Orotate phosphoribosyltransferase compare
MPMX20_04442 -4.6 -8.3 Sec-independent protein translocase protein TatC compare
MPMX20_03018 -4.6 -4.5 hypothetical protein compare
MPMX20_03468 -4.6 -9.8 T-protein compare
MPMX20_00514 -4.6 -5.5 Fructose-1,6-bisphosphatase class 1 compare
MPMX20_04443 -4.6 -4.0 Sec-independent protein translocase protein TatB compare
MPMX20_01097 -4.5 -8.7 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_04531 -4.4 -11.9 Cystathionine gamma-synthase compare
MPMX20_00105 -4.4 -17.7 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_04444 -4.4 -1.8 Sec-independent protein translocase protein TatA compare
MPMX20_03019 -4.3 -23.8 hypothetical protein compare
MPMX20_03001 -4.3 -14.2 ATP phosphoribosyltransferase compare
MPMX20_02574 -4.2 -2.9 putative intracellular septation protein A compare
MPMX20_01361 -4.2 -8.9 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_01334 -4.2 -11.6 Phosphoglucomutase compare
MPMX20_00710 -4.1 -16.6 Bifunctional aspartokinase/homoserine dehydrogenase 1 compare
MPMX20_04497 -4.1 -10.3 HTH-type transcriptional regulator GltC compare
MPMX20_00976 -4.1 -5.6 Pyrroline-5-carboxylate reductase compare
MPMX20_01549 -4.1 -4.0 ATP-binding/permease protein CydD compare
MPMX20_00745 -4.1 -6.2 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_01354 -4.1 -4.2 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_04469 -4.0 -3.9 Adenylate cyclase compare
MPMX20_03002 -4.0 -15.0 Histidinol dehydrogenase compare
MPMX20_01362 -4.0 -6.6 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_01370 -4.0 -5.2 Peptidoglycan-associated lipoprotein compare
MPMX20_04278 -4.0 -4.7 3-dehydroquinate synthase compare
MPMX20_00109 -4.0 -22.5 hypothetical protein compare
MPMX20_00106 -3.9 -2.7 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_04650 -3.9 -3.8 tRNA modification GTPase MnmE compare
MPMX20_04110 -3.9 -7.4 Nitrogen regulatory protein compare
MPMX20_03003 -3.9 -12.3 Histidinol-phosphate aminotransferase compare
MPMX20_00241 -3.9 -12.1 Glucose-6-phosphate isomerase compare
MPMX20_03008 -3.9 -7.7 Histidine biosynthesis bifunctional protein HisIE compare
MPMX20_01030 -3.8 -11.5 Lon protease compare
MPMX20_01349 -3.8 -7.7 Citrate synthase compare
MPMX20_01028 -3.8 -2.6 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_01356 -3.8 -12.8 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_04440 -3.8 -2.1 Transcription antitermination protein RfaH compare
MPMX20_04483 -3.7 -2.6 Lipid III flippase compare
MPMX20_03010 -3.7 -3.6 UDP-glucose 4-epimerase compare
MPMX20_03210 -3.7 -7.4 NADH-quinone oxidoreductase subunit J compare
MPMX20_03217 -3.6 -6.5 NADH-quinone oxidoreductase subunit B compare
MPMX20_04626 -3.6 -3.5 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_03021 -3.6 -8.6 hypothetical protein compare
MPMX20_04197 -3.6 -4.9 Trk system potassium uptake protein TrkA compare
MPMX20_02475 -3.6 -4.8 Putrescine export system permease protein SapB compare
MPMX20_00812 -3.6 -6.4 Aconitate hydratase B compare
MPMX20_00767 -3.6 -11.7 3-isopropylmalate dehydratase large subunit 1 compare
MPMX20_03212 -3.5 -7.4 NADH-quinone oxidoreductase subunit H compare
MPMX20_00110 -3.5 -18.7 hypothetical protein compare
MPMX20_00768 -3.5 -15.1 3-isopropylmalate dehydrogenase compare
MPMX20_01570 -3.5 -3.1 Integration host factor subunit beta compare
MPMX20_01357 -3.5 -6.6 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_00102 -3.5 -3.4 hypothetical protein compare
MPMX20_02672 -3.5 -23.4 hypothetical protein compare
MPMX20_03213 -3.4 -12.2 NADH-quinone oxidoreductase subunit G compare
MPMX20_04768 -3.4 -8.3 hypothetical protein compare
MPMX20_03852 -3.4 -13.2 Cystathionine beta-lyase MetC compare
MPMX20_00766 -3.4 -8.0 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_01029 -3.4 -4.6 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_03013 -3.4 -11.8 dTDP-glucose 4,6-dehydratase compare
MPMX20_03216 -3.4 -13.0 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_04489 -3.4 -16.6 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_04595 -3.4 -2.3 Glutamine synthetase compare
MPMX20_03022 -3.3 -4.6 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_03466 -3.3 -9.6 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX20_02591 -3.3 -7.6 DNA-binding protein H-NS compare
MPMX20_03310 -3.3 -6.3 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_02476 -3.2 -3.1 Putrescine export system permease protein SapC compare
MPMX20_03407 -3.2 -4.3 Chaperone protein HscA compare
MPMX20_02593 -3.2 -18.6 Regulator of RpoS compare
MPMX20_03214 -3.2 -11.5 NADH-quinone oxidoreductase subunit F compare
MPMX20_00086 -3.2 -4.2 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_03382 -3.1 -2.2 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_04279 -3.1 -3.8 Shikimate kinase 1 compare
MPMX20_02513 -3.1 -11.5 Tryptophan synthase beta chain compare
MPMX20_03132 -3.1 -10.1 Tagatose-6-phosphate kinase compare
MPMX20_00556 -3.1 -9.6 Ornithine carbamoyltransferase subunit F compare
MPMX20_02510 -3.1 -13.0 Anthranilate synthase component 1 compare
MPMX20_03012 -3.1 -13.3 Glucose-1-phosphate thymidylyltransferase 1 compare
MPMX20_04668 -3.0 -3.1 hypothetical protein compare
MPMX20_03683 -3.0 -3.6 RecBCD enzyme subunit RecB compare
MPMX20_02512 -3.0 -10.6 Tryptophan biosynthesis protein TrpCF compare
MPMX20_03208 -3.0 -9.1 NADH-quinone oxidoreductase subunit L compare
MPMX20_03206 -3.0 -9.7 NADH-quinone oxidoreductase subunit N compare
MPMX20_02766 -2.9 -5.2 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_03490 -2.9 -6.0 SsrA-binding protein compare
MPMX20_03685 -2.9 -4.5 RecBCD enzyme subunit RecC compare
MPMX20_03211 -2.9 -4.4 NADH-quinone oxidoreductase subunit I compare
MPMX20_04532 -2.9 -3.7 Met repressor compare
MPMX20_00108 -2.9 -14.1 hypothetical protein compare
MPMX20_00998 -2.8 -3.8 Sec translocon accessory complex subunit YajC compare
MPMX20_02511 -2.8 -11.2 Bifunctional protein TrpGD compare
MPMX20_03308 -2.8 -8.0 Cysteine synthase A compare
MPMX20_03207 -2.8 -8.6 NADH-quinone oxidoreductase subunit M compare
MPMX20_03409 -2.8 -3.1 Iron-binding protein IscA compare
MPMX20_02514 -2.8 -7.1 Tryptophan synthase alpha chain compare
MPMX20_04467 -2.7 -7.7 Diaminopimelate epimerase compare
MPMX20_01156 -2.7 -5.1 hypothetical protein compare
MPMX20_04276 -2.7 -7.2 DNA adenine methylase compare
MPMX20_03408 -2.7 -3.1 Co-chaperone protein HscB compare
MPMX20_03227 -2.7 -6.1 Phosphate acetyltransferase compare
MPMX20_02770 -2.7 -5.4 Dihydroneopterin triphosphate diphosphatase compare
MPMX20_04498 -2.6 -9.2 L-threonine dehydratase biosynthetic IlvA compare
MPMX20_04642 -2.6 -3.0 Phosphate import ATP-binding protein PstB compare
MPMX20_02477 -2.6 -4.5 Peptide transport system ATP-binding protein SapD compare
MPMX20_02646 -2.6 -2.2 hypothetical protein compare
MPMX20_00453 -2.6 -2.3 RNA-binding protein Hfq compare
MPMX20_03267 -2.6 -4.7 Phosphohistidine phosphatase SixA compare
MPMX20_03641 -2.6 -8.3 Phosphoadenosine phosphosulfate reductase compare
MPMX20_04119 -2.5 -2.6 DNA polymerase III subunit chi compare
MPMX20_00769 -2.5 -9.9 2-isopropylmalate synthase compare
MPMX20_03469 -2.4 -8.6 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive compare
MPMX20_01352 -2.4 -9.9 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_00721 -2.4 -3.8 Chaperone protein DnaJ compare
MPMX20_02826 -2.4 -2.4 Cold shock-like protein CspB compare
MPMX20_04530 -2.4 -8.7 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_04275 -2.4 -2.6 Ribulose-phosphate 3-epimerase compare
MPMX20_00747 -2.3 -5.5 Ribosomal RNA small subunit methyltransferase A compare
MPMX20_01552 -2.3 -5.4 hypothetical protein compare
MPMX20_01351 -2.3 -4.5 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_02825 -2.2 -3.4 Cold shock-like protein CspB compare
MPMX20_00899 -2.2 -2.3 Ribonuclease HI compare
MPMX20_04557 -2.2 -9.9 Sensor histidine kinase CpxA compare
MPMX20_03017 -2.2 -6.7 hypothetical protein compare
MPMX20_01353 -2.2 -4.3 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_01350 -2.2 -5.2 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_01286 -2.2 -1.6 Sec-independent protein translocase protein TatE compare
MPMX20_01607 -2.1 -4.4 Outer membrane protein A compare
MPMX20_02768 -2.1 -2.7 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_03020 -2.1 -5.3 hypothetical protein compare
MPMX20_01984 -2.1 -2.5 Ribonuclease T compare
MPMX20_03154 -2.1 -9.4 Inner membrane protein YejM compare
MPMX20_03705 -2.1 -9.3 Diaminopimelate decarboxylase compare
MPMX20_04140 -2.0 -7.4 Malate dehydrogenase compare
MPMX20_01901 -2.0 -1.8 Integration host factor subunit alpha compare
MPMX20_02203 -2.0 -2.1 hypothetical protein compare
MPMX20_03756 -2.0 -4.3 FAD assembly factor SdhE compare
MPMX20_03580 -2.0 -6.6 Protein RecA compare
MPMX20_04529 -1.9 -5.7 5,10-methylenetetrahydrofolate reductase compare
MPMX20_00492 -1.9 -6.7 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX20_02645 -1.9 -7.7 Ribosome-binding ATPase YchF compare
MPMX20_03825 -1.9 -5.6 Citrate lyase subunit beta compare
MPMX20_01734 -1.9 -7.5 Lipid A biosynthesis lauroyltransferase compare
MPMX20_04641 -1.9 -3.3 Phosphate transport system permease protein PstA compare
MPMX20_03642 -1.9 -8.8 Sulfite reductase [NADPH] hemoprotein beta-component compare
MPMX20_01551 -1.8 -6.6 Leucine-responsive regulatory protein compare
MPMX20_03636 -1.8 -5.2 Adenylyl-sulfate kinase compare
MPMX20_02478 -1.8 -7.0 Putrescine export system ATP-binding protein SapF compare
MPMX20_04546 -1.8 -3.0 hypothetical protein compare


Specific Phenotypes

For 3 genes in this experiment

For carbon source Citric Acid in Enterobacter sp. TBS_079

For carbon source Citric Acid across organisms