Experiment set9S309 for Enterobacter sp. TBS_079

Compare to:

Potassium acetate carbon source

200 most important genes:

  gene name fitness t score description  
MPMX20_03338 -6.3 -4.4 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_00831 -6.0 -7.1 RNA polymerase-binding transcription factor DksA compare
MPMX20_03354 -5.8 -11.8 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_01366 -5.7 -6.8 Tol-Pal system protein TolQ compare
MPMX20_03214 -5.6 -6.7 NADH-quinone oxidoreductase subunit F compare
MPMX20_00693 -5.6 -11.9 Phosphoserine phosphatase compare
MPMX20_01570 -5.5 -3.8 Integration host factor subunit beta compare
MPMX20_03210 -5.5 -5.4 NADH-quinone oxidoreductase subunit J compare
MPMX20_04520 -5.3 -10.8 Argininosuccinate lyase compare
MPMX20_03213 -5.2 -7.2 NADH-quinone oxidoreductase subunit G compare
MPMX20_04110 -5.2 -5.1 Nitrogen regulatory protein compare
MPMX20_04521 -5.2 -8.6 Acetylglutamate kinase compare
MPMX20_00226 -5.1 -11.4 Bifunctional purine biosynthesis protein PurH compare
MPMX20_03264 -5.1 -7.0 Chorismate synthase compare
MPMX20_01355 -5.0 -1.8 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_03426 -5.0 -18.3 Phosphoribosylformylglycinamidine synthase compare
MPMX20_01548 -5.0 -3.5 putative ABC transporter ATP-binding/permease protein compare
MPMX20_00225 -5.0 -12.9 Phosphoribosylamine--glycine ligase compare
MPMX20_00740 -5.0 -11.6 Carbamoyl-phosphate synthase large chain compare
MPMX20_03209 -5.0 -4.8 NADH-quinone oxidoreductase subunit K compare
MPMX20_04499 -5.0 -17.0 Dihydroxy-acid dehydratase compare
MPMX20_00231 -4.9 -13.5 Malate synthase A conserved
MPMX20_01566 -4.9 -14.3 Phosphoserine aminotransferase compare
MPMX20_03207 -4.9 -4.8 NADH-quinone oxidoreductase subunit M compare
MPMX20_02494 -4.9 -8.7 Orotidine 5'-phosphate decarboxylase compare
MPMX20_00927 -4.8 -18.3 Glutamate 5-kinase compare
MPMX20_00544 -4.8 -10.7 Aspartate carbamoyltransferase catalytic subunit compare
MPMX20_01357 -4.8 -6.8 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_01369 -4.8 -13.4 Tol-Pal system protein TolB compare
MPMX20_03771 -4.8 -13.8 D-3-phosphoglycerate dehydrogenase compare
MPMX20_01950 -4.8 -4.6 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_03216 -4.7 -13.2 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_00773 -4.7 -15.8 Catabolite repressor/activator compare
MPMX20_01596 -4.7 -22.8 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_01567 -4.7 -7.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_00093 -4.6 -8.4 Orotate phosphoribosyltransferase compare
MPMX20_01097 -4.6 -9.4 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_03212 -4.6 -6.3 NADH-quinone oxidoreductase subunit H compare
MPMX20_04443 -4.6 -5.4 Sec-independent protein translocase protein TatB compare
MPMX20_00739 -4.6 -6.3 Carbamoyl-phosphate synthase small chain compare
MPMX20_01352 -4.6 -11.0 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_01549 -4.6 -3.1 ATP-binding/permease protein CydD compare
MPMX20_04444 -4.5 -2.2 Sec-independent protein translocase protein TatA compare
MPMX20_00928 -4.5 -14.8 Gamma-glutamyl phosphate reductase compare
MPMX20_01901 -4.5 -3.1 Integration host factor subunit alpha compare
MPMX20_03211 -4.5 -6.2 NADH-quinone oxidoreductase subunit I compare
MPMX20_03206 -4.5 -10.9 NADH-quinone oxidoreductase subunit N compare
MPMX20_01367 -4.5 -9.1 Tol-Pal system protein TolR compare
MPMX20_03215 -4.5 -5.3 NADH-quinone oxidoreductase subunit E compare
MPMX20_04077 -4.5 -13.1 Argininosuccinate synthase compare
MPMX20_03217 -4.5 -6.8 NADH-quinone oxidoreductase subunit B compare
MPMX20_01353 -4.5 -8.0 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_01098 -4.4 -6.3 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_00514 -4.4 -8.5 Fructose-1,6-bisphosphatase class 1 compare
MPMX20_03208 -4.4 -8.4 NADH-quinone oxidoreductase subunit L compare
MPMX20_01351 -4.4 -6.0 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_00232 -4.4 -16.5 Isocitrate lyase conserved
MPMX20_03267 -4.4 -4.9 Phosphohistidine phosphatase SixA compare
MPMX20_03218 -4.3 -5.8 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_00976 -4.2 -5.0 Pyrroline-5-carboxylate reductase compare
MPMX20_01349 -4.2 -7.6 Citrate synthase compare
MPMX20_00291 -4.2 -16.1 Acetyl-coenzyme A synthetase compare
MPMX20_04518 -4.2 -7.5 Soluble pyridine nucleotide transhydrogenase compare
MPMX20_03681 -4.2 -15.9 Amino-acid acetyltransferase compare
MPMX20_03468 -4.2 -9.4 T-protein compare
MPMX20_02591 -4.2 -9.2 DNA-binding protein H-NS compare
MPMX20_00230 -4.2 -9.3 Homoserine O-succinyltransferase compare
MPMX20_03007 -4.1 -8.5 Imidazole glycerol phosphate synthase subunit HisF compare
MPMX20_01741 -4.1 -7.4 Dihydroorotase compare
MPMX20_04626 -4.1 -2.9 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_00106 -4.1 -4.0 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_01030 -4.0 -11.6 Lon protease compare
MPMX20_04483 -4.0 -2.8 Lipid III flippase compare
MPMX20_04189 -4.0 -7.6 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_01370 -4.0 -6.7 Peptidoglycan-associated lipoprotein compare
MPMX20_04496 -4.0 -10.8 Ketol-acid reductoisomerase (NADP(+)) compare
MPMX20_04522 -4.0 -11.2 N-acetyl-gamma-glutamyl-phosphate reductase compare
MPMX20_03247 -4.0 -11.0 Amidophosphoribosyltransferase compare
MPMX20_00712 -3.9 -12.2 Threonine synthase compare
MPMX20_00556 -3.9 -11.2 Ornithine carbamoyltransferase subunit F compare
MPMX20_03986 -3.9 -4.3 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_04469 -3.9 -5.3 Adenylate cyclase compare
MPMX20_03006 -3.9 -10.4 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX20_02593 -3.9 -21.4 Regulator of RpoS compare
MPMX20_04442 -3.9 -6.9 Sec-independent protein translocase protein TatC compare
MPMX20_03003 -3.9 -13.5 Histidinol-phosphate aminotransferase compare
MPMX20_01350 -3.8 -6.3 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_03010 -3.8 -4.5 UDP-glucose 4-epimerase compare
MPMX20_00711 -3.8 -13.5 Homoserine kinase compare
MPMX20_04642 -3.8 -2.6 Phosphate import ATP-binding protein PstB compare
MPMX20_01362 -3.8 -7.2 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_04523 -3.7 -10.1 Acetylornithine deacetylase compare
MPMX20_00102 -3.7 -3.6 hypothetical protein compare
MPMX20_04595 -3.7 -2.5 Glutamine synthetase compare
MPMX20_04140 -3.7 -11.2 Malate dehydrogenase compare
MPMX20_01029 -3.7 -4.3 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_01607 -3.7 -6.9 Outer membrane protein A compare
MPMX20_04162 -3.6 -6.9 3-dehydroquinate dehydratase compare
MPMX20_01356 -3.6 -10.5 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_03022 -3.6 -4.3 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_01028 -3.6 -3.5 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_02701 -3.5 -3.4 Fatty acid metabolism regulator protein compare
MPMX20_03019 -3.5 -20.3 hypothetical protein compare
MPMX20_04650 -3.5 -5.4 tRNA modification GTPase MnmE compare
MPMX20_04497 -3.4 -9.0 HTH-type transcriptional regulator GltC compare
MPMX20_01334 -3.4 -12.5 Phosphoglucomutase compare
MPMX20_04639 -3.4 -2.0 Phosphate-binding protein PstS compare
MPMX20_04531 -3.4 -10.2 Cystathionine gamma-synthase compare
MPMX20_00710 -3.4 -15.5 Bifunctional aspartokinase/homoserine dehydrogenase 1 compare
MPMX20_03013 -3.4 -13.0 dTDP-glucose 4,6-dehydratase compare
MPMX20_03382 -3.3 -2.3 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_00110 -3.3 -21.0 hypothetical protein compare
MPMX20_02766 -3.3 -5.4 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_00812 -3.3 -9.2 Aconitate hydratase B compare
MPMX20_04768 -3.3 -10.0 hypothetical protein compare
MPMX20_01361 -3.3 -10.3 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_02768 -3.3 -4.4 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_03004 -3.3 -9.2 Histidine biosynthesis bifunctional protein HisB compare
MPMX20_00086 -3.3 -6.0 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_00109 -3.2 -21.0 hypothetical protein compare
MPMX20_03002 -3.2 -10.4 Histidinol dehydrogenase compare
MPMX20_03683 -3.2 -3.8 RecBCD enzyme subunit RecB compare
MPMX20_04278 -3.2 -6.5 3-dehydroquinate synthase compare
MPMX20_02574 -3.1 -5.1 putative intracellular septation protein A compare
MPMX20_03018 -3.1 -7.4 hypothetical protein compare
MPMX20_02476 -3.1 -3.6 Putrescine export system permease protein SapC compare
MPMX20_03001 -3.1 -12.9 ATP phosphoribosyltransferase compare
MPMX20_04641 -3.1 -3.6 Phosphate transport system permease protein PstA compare
MPMX20_04275 -3.1 -3.6 Ribulose-phosphate 3-epimerase compare
MPMX20_01354 -3.1 -3.9 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_04197 -3.0 -7.2 Trk system potassium uptake protein TrkA compare
MPMX20_04136 -3.0 -13.2 Cell division protein ZapE compare
MPMX20_03685 -3.0 -6.0 RecBCD enzyme subunit RecC compare
MPMX20_00745 -3.0 -6.9 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_04276 -3.0 -7.7 DNA adenine methylase compare
MPMX20_03005 -2.9 -10.0 Imidazole glycerol phosphate synthase subunit HisH compare
MPMX20_02478 -2.9 -9.5 Putrescine export system ATP-binding protein SapF compare
MPMX20_04668 -2.9 -2.9 hypothetical protein compare
MPMX20_01368 -2.9 -5.9 hypothetical protein compare
MPMX20_02826 -2.9 -3.4 Cold shock-like protein CspB compare
MPMX20_03021 -2.9 -9.8 hypothetical protein compare
MPMX20_00767 -2.8 -10.9 3-isopropylmalate dehydratase large subunit 1 compare
MPMX20_04530 -2.8 -10.7 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_02767 -2.8 -4.3 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_04532 -2.8 -3.3 Met repressor compare
MPMX20_00105 -2.8 -12.9 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_01286 -2.7 -2.1 Sec-independent protein translocase protein TatE compare
MPMX20_03490 -2.7 -7.0 SsrA-binding protein compare
MPMX20_03012 -2.7 -13.7 Glucose-1-phosphate thymidylyltransferase 1 compare
MPMX20_03756 -2.7 -4.2 FAD assembly factor SdhE compare
MPMX20_02514 -2.7 -5.8 Tryptophan synthase alpha chain compare
MPMX20_03469 -2.7 -8.3 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive compare
MPMX20_03408 -2.6 -3.5 Co-chaperone protein HscB compare
MPMX20_04489 -2.6 -15.2 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_01156 -2.6 -5.1 hypothetical protein compare
MPMX20_04467 -2.6 -7.0 Diaminopimelate epimerase compare
MPMX20_00768 -2.5 -10.9 3-isopropylmalate dehydrogenase compare
MPMX20_02477 -2.5 -4.9 Peptide transport system ATP-binding protein SapD compare
MPMX20_02513 -2.5 -10.8 Tryptophan synthase beta chain compare
MPMX20_01551 -2.4 -6.1 Leucine-responsive regulatory protein compare
MPMX20_03742 -2.4 -9.6 HTH-type transcriptional regulator GalR compare
MPMX20_04640 -2.4 -4.0 Phosphate transport system permease protein PstC compare
MPMX20_03466 -2.3 -9.0 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX20_03008 -2.3 -5.9 Histidine biosynthesis bifunctional protein HisIE compare
MPMX20_01020 -2.3 -1.8 Cytochrome bo(3) ubiquinol oxidase subunit 4 compare
MPMX20_02512 -2.3 -10.3 Tryptophan biosynthesis protein TrpCF compare
MPMX20_04279 -2.2 -3.2 Shikimate kinase 1 compare
MPMX20_02511 -2.2 -8.7 Bifunctional protein TrpGD compare
MPMX20_03805 -2.2 -10.1 Glutathione synthetase compare
MPMX20_04119 -2.2 -3.2 DNA polymerase III subunit chi compare
MPMX20_01942 -2.2 -9.1 HTH-type transcriptional repressor BluR compare
MPMX20_04529 -2.2 -7.4 5,10-methylenetetrahydrofolate reductase compare
MPMX20_02344 -2.2 -1.5 hypothetical protein compare
MPMX20_03308 -2.2 -8.2 Cysteine synthase A compare
MPMX20_03226 -2.2 -4.7 Acetate kinase compare
MPMX20_03852 -2.1 -11.0 Cystathionine beta-lyase MetC compare
MPMX20_04498 -2.1 -8.6 L-threonine dehydratase biosynthetic IlvA compare
MPMX20_02475 -2.1 -5.0 Putrescine export system permease protein SapB compare
MPMX20_01552 -2.1 -5.5 hypothetical protein compare
MPMX20_03154 -2.1 -10.0 Inner membrane protein YejM compare
MPMX20_02672 -2.1 -16.0 hypothetical protein compare
MPMX20_00108 -2.1 -13.4 hypothetical protein compare
MPMX20_04482 -2.0 -8.6 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase compare
MPMX20_02510 -2.0 -11.3 Anthranilate synthase component 1 compare
MPMX20_00998 -2.0 -5.0 Sec translocon accessory complex subunit YajC compare
MPMX20_03390 -2.0 -7.3 Outer membrane protein assembly factor BamB compare
MPMX20_04557 -2.0 -9.5 Sensor histidine kinase CpxA compare
MPMX20_00980 -2.0 -9.2 hypothetical protein compare
MPMX20_04491 -1.9 -5.4 Thioredoxin 1 compare
MPMX20_00570 -1.9 -11.8 putative BsuMI modification methylase subunit YdiO compare
MPMX20_03509 -1.9 -1.2 hypothetical protein compare
MPMX20_00766 -1.9 -5.2 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_04433 -1.9 -11.3 Trk system potassium uptake protein TrkH compare
MPMX20_03629 -1.9 -3.2 Protein-L-isoaspartate O-methyltransferase compare
MPMX20_01734 -1.8 -8.2 Lipid A biosynthesis lauroyltransferase compare
MPMX20_03017 -1.8 -9.9 hypothetical protein compare
MPMX20_01801 -1.8 -6.3 NAD-dependent protein deacylase conserved
MPMX20_04079 -1.8 -2.8 Protein-export membrane protein SecG compare
MPMX20_02203 -1.8 -2.4 hypothetical protein compare
MPMX20_02549 -1.8 -4.6 hypothetical protein compare


Specific Phenotypes

For 11 genes in this experiment

For carbon source Potassium acetate in Enterobacter sp. TBS_079

For carbon source Potassium acetate across organisms