Experiment set9S305 for Enterobacter sp. TBS_079

Compare to:

Itaconic Acid carbon source

200 most important genes:

  gene name fitness t score description  
MPMX20_03209 -5.4 -3.1 NADH-quinone oxidoreductase subunit K compare
MPMX20_04443 -5.4 -3.0 Sec-independent protein translocase protein TatB compare
MPMX20_04670 -5.0 -2.3 hypothetical protein compare
MPMX20_04279 -4.7 -3.1 Shikimate kinase 1 compare
MPMX20_01366 -4.6 -6.3 Tol-Pal system protein TolQ compare
MPMX20_03018 -4.2 -6.5 hypothetical protein compare
MPMX20_03386 -4.2 -1.0 putative protein YfgJ compare
MPMX20_02574 -4.1 -2.8 putative intracellular septation protein A compare
MPMX20_01984 -4.1 -2.3 Ribonuclease T compare
MPMX20_03310 -4.1 -2.8 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_03021 -4.1 -2.8 hypothetical protein compare
MPMX20_00453 -4.0 -2.1 RNA-binding protein Hfq compare
MPMX20_03019 -3.9 -19.8 hypothetical protein compare
MPMX20_01367 -3.8 -6.0 Tol-Pal system protein TolR compare
MPMX20_03207 -3.7 -7.5 NADH-quinone oxidoreductase subunit M compare
MPMX20_02476 -3.6 -2.5 Putrescine export system permease protein SapC compare
MPMX20_03408 -3.5 -2.2 Co-chaperone protein HscB compare
MPMX20_01028 -3.5 -2.4 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_04440 -3.5 -1.6 Transcription antitermination protein RfaH compare
MPMX20_02591 -3.5 -6.1 DNA-binding protein H-NS compare
MPMX20_04275 -3.5 -2.4 Ribulose-phosphate 3-epimerase compare
MPMX20_02203 -3.3 -2.7 hypothetical protein compare
MPMX20_01549 -3.3 -5.5 ATP-binding/permease protein CydD compare
MPMX20_00109 -3.3 -17.0 hypothetical protein compare
MPMX20_01362 -3.3 -5.3 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_04626 -3.2 -3.8 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_04642 -3.2 -2.1 Phosphate import ATP-binding protein PstB compare
MPMX20_01030 -3.2 -6.7 Lon protease compare
MPMX20_04768 -3.2 -19.2 hypothetical protein compare
MPMX20_03020 -3.1 -7.3 hypothetical protein compare
MPMX20_01548 -3.1 -5.7 putative ABC transporter ATP-binding/permease protein compare
MPMX20_04641 -3.1 -2.1 Phosphate transport system permease protein PstA compare
MPMX20_03022 -3.1 -5.5 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_02912 -3.1 -1.2 hypothetical protein compare
MPMX20_00105 -3.0 -10.2 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_00110 -3.0 -14.1 hypothetical protein compare
MPMX20_00441 -2.9 -0.9 Phosphatidylserine decarboxylase proenzyme compare
MPMX20_01275 -2.9 -2.5 hypothetical protein compare
MPMX20_01354 -2.8 -3.1 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_01361 -2.8 -7.1 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_04197 -2.8 -6.7 Trk system potassium uptake protein TrkA compare
MPMX20_03010 -2.7 -7.5 UDP-glucose 4-epimerase compare
MPMX20_04469 -2.7 -4.9 Adenylate cyclase compare
MPMX20_02309 -2.7 -5.4 hypothetical protein compare
MPMX20_03217 -2.7 -3.9 NADH-quinone oxidoreductase subunit B compare
MPMX20_00106 -2.6 -7.5 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_04650 -2.6 -5.0 tRNA modification GTPase MnmE compare
MPMX20_01349 -2.6 -5.9 Citrate synthase compare
MPMX20_04253 -2.6 -0.8 Malonate decarboxylase acyl carrier protein compare
MPMX20_00747 -2.6 -5.9 Ribosomal RNA small subunit methyltransferase A compare
MPMX20_04489 -2.6 -11.6 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_00226 -2.5 -7.5 Bifunctional purine biosynthesis protein PurH compare
MPMX20_00514 -2.5 -7.2 Fructose-1,6-bisphosphatase class 1 compare
MPMX20_03986 -2.5 -2.2 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_00693 -2.5 -5.0 Phosphoserine phosphatase compare
MPMX20_03685 -2.5 -5.2 RecBCD enzyme subunit RecC compare
MPMX20_03013 -2.4 -9.6 dTDP-glucose 4,6-dehydratase compare
MPMX20_02477 -2.4 -4.4 Peptide transport system ATP-binding protein SapD compare
MPMX20_00740 -2.4 -7.2 Carbamoyl-phosphate synthase large chain compare
MPMX20_03213 -2.4 -5.8 NADH-quinone oxidoreductase subunit G compare
MPMX20_00102 -2.4 -3.5 hypothetical protein compare
MPMX20_04170 -2.4 -1.6 DNA-binding protein Fis compare
MPMX20_02344 -2.4 -1.4 hypothetical protein compare
MPMX20_03409 -2.3 -2.3 Iron-binding protein IscA compare
MPMX20_02707 -2.3 -2.2 Septum site-determining protein MinC compare
MPMX20_03017 -2.3 -7.1 hypothetical protein compare
MPMX20_04077 -2.3 -5.8 Argininosuccinate synthase compare
MPMX20_03210 -2.3 -3.3 NADH-quinone oxidoreductase subunit J compare
MPMX20_03683 -2.3 -5.5 RecBCD enzyme subunit RecB compare
MPMX20_01950 -2.3 -2.5 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_04442 -2.2 -3.2 Sec-independent protein translocase protein TatC compare
MPMX20_02593 -2.2 -10.5 Regulator of RpoS compare
MPMX20_03214 -2.2 -5.1 NADH-quinone oxidoreductase subunit F compare
MPMX20_03479 -2.2 -1.3 30S ribosomal protein S16 compare
MPMX20_04598 -2.2 -5.1 Oxygen-independent coproporphyrinogen III oxidase compare
MPMX20_02635 -2.2 -2.5 Release factor glutamine methyltransferase compare
MPMX20_00739 -2.2 -4.2 Carbamoyl-phosphate synthase small chain compare
MPMX20_04278 -2.1 -4.3 3-dehydroquinate synthase compare
MPMX20_00831 -2.1 -4.1 RNA polymerase-binding transcription factor DksA compare
MPMX20_04467 -2.1 -4.2 Diaminopimelate epimerase compare
MPMX20_03290 -2.0 -1.3 tRNA-Ala compare
MPMX20_03216 -2.0 -6.4 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_00108 -2.0 -10.3 hypothetical protein compare
MPMX20_04483 -2.0 -3.1 Lipid III flippase compare
MPMX20_04111 -2.0 -2.3 RNase adapter protein RapZ compare
MPMX20_03208 -1.9 -3.9 NADH-quinone oxidoreductase subunit L compare
MPMX20_02102 -1.9 -1.5 hypothetical protein compare
MPMX20_02701 -1.9 -1.9 Fatty acid metabolism regulator protein compare
MPMX20_04276 -1.9 -4.0 DNA adenine methylase compare
MPMX20_00093 -1.9 -4.9 Orotate phosphoribosyltransferase compare
MPMX20_00556 -1.9 -4.5 Ornithine carbamoyltransferase subunit F compare
MPMX20_03015 -1.9 -11.7 Phosphoglucosamine mutase compare
MPMX20_01029 -1.9 -2.8 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_03012 -1.8 -7.1 Glucose-1-phosphate thymidylyltransferase 1 compare
MPMX20_03206 -1.8 -5.1 NADH-quinone oxidoreductase subunit N compare
MPMX20_01552 -1.8 -5.0 hypothetical protein compare
MPMX20_04427 -1.8 -0.7 5S ribosomal RNA compare
MPMX20_00998 -1.8 -1.5 Sec translocon accessory complex subunit YajC compare
MPMX20_04189 -1.8 -3.9 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_03390 -1.8 -3.8 Outer membrane protein assembly factor BamB compare
MPMX20_00745 -1.8 -2.8 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_00428 -1.7 -2.8 hypothetical protein compare
MPMX20_03215 -1.7 -1.6 NADH-quinone oxidoreductase subunit E compare
MPMX20_02769 -1.7 -2.0 putative transcriptional regulatory protein YebC compare
MPMX20_03122 -1.7 -4.6 hypothetical protein compare
MPMX20_01596 -1.7 -10.2 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_04309 -1.7 -3.5 Aerobic glycerol-3-phosphate dehydrogenase compare
MPMX20_01369 -1.6 -4.2 Tol-Pal system protein TolB compare
MPMX20_00773 -1.6 -5.2 Catabolite repressor/activator compare
MPMX20_01097 -1.6 -4.3 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_03356 -1.6 -6.0 Polyphosphate kinase compare
MPMX20_02827 -1.6 -3.5 hypothetical protein compare
MPMX20_04463 -1.6 -4.0 DNA helicase II compare
MPMX20_03016 -1.6 -9.5 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_04585 -1.6 -2.4 HTH-type transcriptional repressor CsqR compare
MPMX20_03382 -1.6 -2.1 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_04385 -1.6 -3.7 hypothetical protein compare
MPMX20_01488 -1.6 -1.5 hypothetical protein compare
MPMX20_00241 -1.6 -4.5 Glucose-6-phosphate isomerase compare
MPMX20_02474 -1.6 -3.9 Peptide transport periplasmic protein SapA compare
MPMX20_03037 -1.6 -4.0 hypothetical protein compare
MPMX20_04628 -1.6 -1.4 ATP synthase protein I compare
MPMX20_03490 -1.6 -3.0 SsrA-binding protein compare
MPMX20_03951 -1.6 -1.8 hypothetical protein compare
MPMX20_02478 -1.6 -4.4 Putrescine export system ATP-binding protein SapF compare
MPMX20_01156 -1.6 -2.1 hypothetical protein compare
MPMX20_03407 -1.6 -2.4 Chaperone protein HscA compare
MPMX20_04119 -1.6 -1.4 DNA polymerase III subunit chi compare
MPMX20_01098 -1.5 -2.3 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_02494 -1.5 -4.0 Orotidine 5'-phosphate decarboxylase compare
MPMX20_03469 -1.5 -4.4 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive compare
MPMX20_04522 -1.5 -3.2 N-acetyl-gamma-glutamyl-phosphate reductase compare
MPMX20_02295 -1.5 -1.2 hypothetical protein compare
MPMX20_03770 -1.5 -2.0 5-formyltetrahydrofolate cyclo-ligase compare
MPMX20_03354 -1.5 -4.4 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_01566 -1.5 -5.2 Phosphoserine aminotransferase compare
MPMX20_01334 -1.5 -3.7 Phosphoglucomutase compare
MPMX20_02645 -1.5 -3.8 Ribosome-binding ATPase YchF compare
MPMX20_00225 -1.5 -4.9 Phosphoribosylamine--glycine ligase compare
MPMX20_02162 -1.5 -2.4 hypothetical protein compare
MPMX20_04520 -1.5 -5.8 Argininosuccinate lyase compare
MPMX20_03154 -1.5 -4.6 Inner membrane protein YejM compare
MPMX20_04625 -1.4 -2.1 Protein MioC compare
MPMX20_03629 -1.4 -2.5 Protein-L-isoaspartate O-methyltransferase compare
MPMX20_03426 -1.4 -5.1 Phosphoribosylformylglycinamidine synthase compare
MPMX20_03969 -1.4 -2.6 hypothetical protein compare
MPMX20_02766 -1.4 -2.0 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_03247 -1.4 -3.5 Amidophosphoribosyltransferase compare
MPMX20_04530 -1.4 -5.4 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_02114 -1.4 -2.1 hypothetical protein compare
MPMX20_03681 -1.3 -4.7 Amino-acid acetyltransferase compare
MPMX20_03323 -1.3 -2.0 Oxygen-dependent coproporphyrinogen-III oxidase compare
MPMX20_02696 -1.3 -3.0 Murein tetrapeptide carboxypeptidase compare
MPMX20_00258 -1.3 -2.1 Diacylglycerol kinase compare
MPMX20_00813 -1.3 -1.7 hypothetical protein compare
MPMX20_01368 -1.3 -2.3 hypothetical protein compare
MPMX20_01186 -1.3 -3.6 Transcriptional activator protein ExaE compare
MPMX20_03443 -1.3 -2.4 Anti-sigma-E factor RseA compare
MPMX20_00557 -1.3 -3.0 Regulator of ribonuclease activity B compare
MPMX20_03440 -1.3 -3.1 Elongation factor 4 compare
MPMX20_01181 -1.3 -2.6 Putative transferase YhbX compare
MPMX20_02768 -1.3 -1.7 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_02529 -1.2 -4.0 Cold shock protein CspA compare
MPMX20_01054 -1.2 -1.6 Transcriptional repressor RcnR compare
MPMX20_03591 -1.2 -3.2 Glucitol operon repressor compare
MPMX20_04109 -1.2 -2.3 Ribosome hibernation promoting factor compare
MPMX20_04480 -1.2 -3.5 UDP-N-acetyl-D-mannosaminuronic acid transferase compare
MPMX20_01465 -1.2 -2.8 Fructose-6-phosphate aldolase 1 compare
MPMX20_02307 -1.2 -1.2 hypothetical protein compare
MPMX20_01153 -1.2 -1.4 HTH-type transcriptional activator RhaS compare
MPMX20_03153 -1.2 -1.2 hypothetical protein compare
MPMX20_04518 -1.2 -2.9 Soluble pyridine nucleotide transhydrogenase compare
MPMX20_00980 -1.2 -3.3 hypothetical protein compare
MPMX20_00812 -1.2 -3.3 Aconitate hydratase B compare
MPMX20_00606 -1.2 -5.4 hypothetical protein compare
MPMX20_03212 -1.2 -2.2 NADH-quinone oxidoreductase subunit H compare
MPMX20_00455 -1.2 -3.5 Modulator of FtsH protease HflK compare
MPMX20_00721 -1.2 -1.6 Chaperone protein DnaJ compare
MPMX20_03756 -1.2 -1.9 FAD assembly factor SdhE compare
MPMX20_00793 -1.2 -1.7 DNA gyrase inhibitor YacG compare
MPMX20_01065 -1.2 -2.7 Multidrug efflux pump subunit AcrA compare
MPMX20_01974 -1.1 -0.7 Riboflavin synthase compare
MPMX20_00544 -1.1 -2.8 Aspartate carbamoyltransferase catalytic subunit compare
MPMX20_03863 -1.1 -2.8 Transcriptional regulatory protein QseB compare
MPMX20_02061 -1.1 -3.4 Inner membrane transport protein YnfM compare
MPMX20_01567 -1.1 -3.1 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_00086 -1.1 -1.4 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_04482 -1.1 -4.4 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase compare
MPMX20_01734 -1.1 -3.1 Lipid A biosynthesis lauroyltransferase compare
MPMX20_03932 -1.1 -2.0 hypothetical protein compare
MPMX20_04098 -1.1 -2.9 Intermembrane phospholipid transport system binding protein MlaC compare
MPMX20_03435 -1.1 -1.0 Pyridoxine 5'-phosphate synthase compare
MPMX20_04552 -1.1 -2.3 ATP-dependent 6-phosphofructokinase isozyme 1 compare
MPMX20_04059 -1.1 -1.6 hypothetical protein compare
MPMX20_03571 -1.1 -1.0 tRNA-Arg compare
MPMX20_00801 -1.1 -1.1 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
MPMX20_02204 -1.1 -2.7 hypothetical protein compare
MPMX20_02672 -1.1 -7.0 hypothetical protein compare
MPMX20_02948 -1.1 -4.9 Transcriptional regulatory protein RcsA compare
MPMX20_01101 -1.1 -0.9 Peptidyl-prolyl cis-trans isomerase B compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source Itaconic Acid in Enterobacter sp. TBS_079

For carbon source Itaconic Acid across organisms