Experiment set9S297 for Enterobacter sp. TBS_079

Compare to:

D-Galactose carbon source

200 most important genes:

  gene name fitness t score description  
MPMX20_01566 -6.9 -11.5 Phosphoserine aminotransferase compare
MPMX20_03006 -6.5 -4.5 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX20_03771 -6.5 -10.8 D-3-phosphoglycerate dehydrogenase compare
MPMX20_00693 -6.5 -8.8 Phosphoserine phosphatase compare
MPMX20_01098 -6.3 -4.4 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_00831 -6.3 -6.2 RNA polymerase-binding transcription factor DksA compare
MPMX20_00928 -6.2 -8.5 Gamma-glutamyl phosphate reductase compare
MPMX20_00927 -6.2 -13.2 Glutamate 5-kinase compare
MPMX20_04077 -6.1 -7.3 Argininosuccinate synthase compare
MPMX20_04499 -6.1 -11.0 Dihydroxy-acid dehydratase compare
MPMX20_04531 -6.1 -8.3 Cystathionine gamma-synthase compare
MPMX20_03354 -5.8 -12.9 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_03468 -5.7 -6.8 T-protein compare
MPMX20_04521 -5.7 -6.8 Acetylglutamate kinase compare
MPMX20_03681 -5.7 -15.2 Amino-acid acetyltransferase compare
MPMX20_03007 -5.7 -7.7 Imidazole glycerol phosphate synthase subunit HisF compare
MPMX20_03004 -5.6 -9.4 Histidine biosynthesis bifunctional protein HisB compare
MPMX20_03264 -5.6 -5.5 Chorismate synthase compare
MPMX20_03338 -5.6 -6.6 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_04520 -5.6 -8.5 Argininosuccinate lyase compare
MPMX20_01385 -5.5 -6.6 Galactose-1-phosphate uridylyltransferase conserved
MPMX20_03003 -5.5 -10.0 Histidinol-phosphate aminotransferase compare
MPMX20_00226 -5.5 -9.3 Bifunctional purine biosynthesis protein PurH compare
MPMX20_01367 -5.5 -6.5 Tol-Pal system protein TolR compare
MPMX20_00712 -5.5 -12.2 Threonine synthase compare
MPMX20_04162 -5.4 -3.7 3-dehydroquinate dehydratase compare
MPMX20_04524 -5.4 -15.2 Phosphoenolpyruvate carboxylase compare
MPMX20_00230 -5.4 -9.0 Homoserine O-succinyltransferase compare
MPMX20_03426 -5.3 -16.5 Phosphoribosylformylglycinamidine synthase compare
MPMX20_03001 -5.3 -13.3 ATP phosphoribosyltransferase compare
MPMX20_03002 -5.2 -15.1 Histidinol dehydrogenase compare
MPMX20_00740 -5.2 -9.4 Carbamoyl-phosphate synthase large chain compare
MPMX20_01368 -5.2 -6.2 hypothetical protein compare
MPMX20_04523 -5.2 -9.3 Acetylornithine deacetylase compare
MPMX20_01386 -5.1 -6.1 UDP-glucose 4-epimerase compare
MPMX20_01567 -5.1 -5.0 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_01355 -5.0 -2.0 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_01369 -5.0 -12.1 Tol-Pal system protein TolB compare
MPMX20_04522 -5.0 -8.3 N-acetyl-gamma-glutamyl-phosphate reductase compare
MPMX20_00711 -4.9 -13.9 Homoserine kinase compare
MPMX20_01384 -4.9 -9.4 Galactokinase conserved
MPMX20_04189 -4.9 -4.8 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_00225 -4.9 -12.6 Phosphoribosylamine--glycine ligase compare
MPMX20_04498 -4.8 -11.7 L-threonine dehydratase biosynthetic IlvA compare
MPMX20_01349 -4.8 -7.3 Citrate synthase compare
MPMX20_01097 -4.8 -8.5 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_01950 -4.7 -4.6 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_00710 -4.7 -18.1 Bifunctional aspartokinase/homoserine dehydrogenase 1 compare
MPMX20_00544 -4.7 -10.5 Aspartate carbamoyltransferase catalytic subunit compare
MPMX20_01596 -4.7 -21.8 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_01548 -4.6 -5.5 putative ABC transporter ATP-binding/permease protein compare
MPMX20_03247 -4.6 -10.7 Amidophosphoribosyltransferase compare
MPMX20_02514 -4.6 -6.2 Tryptophan synthase alpha chain compare
MPMX20_00767 -4.6 -12.8 3-isopropylmalate dehydratase large subunit 1 compare
MPMX20_04496 -4.6 -9.3 Ketol-acid reductoisomerase (NADP(+)) compare
MPMX20_00739 -4.5 -5.4 Carbamoyl-phosphate synthase small chain compare
MPMX20_01370 -4.5 -5.8 Peptidoglycan-associated lipoprotein compare
MPMX20_00093 -4.4 -8.5 Orotate phosphoribosyltransferase compare
MPMX20_01334 -4.4 -10.7 Phosphoglucomutase compare
MPMX20_03008 -4.4 -7.3 Histidine biosynthesis bifunctional protein HisIE compare
MPMX20_02494 -4.4 -10.1 Orotidine 5'-phosphate decarboxylase compare
MPMX20_01362 -4.3 -5.9 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_04278 -4.3 -4.2 3-dehydroquinate synthase compare
MPMX20_01741 -4.3 -6.6 Dihydroorotase compare
MPMX20_00976 -4.2 -5.0 Pyrroline-5-carboxylate reductase compare
MPMX20_00768 -4.2 -15.0 3-isopropylmalate dehydrogenase compare
MPMX20_02591 -4.1 -8.6 DNA-binding protein H-NS compare
MPMX20_01549 -4.1 -4.8 ATP-binding/permease protein CydD compare
MPMX20_00766 -4.0 -9.2 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_01028 -3.9 -2.7 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_04497 -3.8 -11.0 HTH-type transcriptional regulator GltC compare
MPMX20_01366 -3.8 -5.8 Tol-Pal system protein TolQ compare
MPMX20_02513 -3.7 -13.6 Tryptophan synthase beta chain compare
MPMX20_01029 -3.7 -4.3 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_04444 -3.7 -2.9 Sec-independent protein translocase protein TatA compare
MPMX20_02512 -3.6 -12.2 Tryptophan biosynthesis protein TrpCF compare
MPMX20_03005 -3.6 -10.4 Imidazole glycerol phosphate synthase subunit HisH compare
MPMX20_00556 -3.6 -9.3 Ornithine carbamoyltransferase subunit F compare
MPMX20_04595 -3.5 -2.4 Glutamine synthetase compare
MPMX20_04768 -3.5 -9.4 hypothetical protein compare
MPMX20_04650 -3.4 -5.1 tRNA modification GTPase MnmE compare
MPMX20_01354 -3.4 -5.1 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_03685 -3.4 -3.3 RecBCD enzyme subunit RecC compare
MPMX20_03683 -3.4 -2.3 RecBCD enzyme subunit RecB compare
MPMX20_03466 -3.3 -8.0 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX20_03382 -3.3 -2.3 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_02574 -3.3 -4.9 putative intracellular septation protein A compare
MPMX20_04119 -3.2 -3.1 DNA polymerase III subunit chi compare
MPMX20_02511 -3.2 -11.2 Bifunctional protein TrpGD compare
MPMX20_04483 -3.2 -4.4 Lipid III flippase compare
MPMX20_03018 -3.2 -7.1 hypothetical protein compare
MPMX20_03022 -3.1 -6.2 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_04440 -3.1 -2.9 Transcription antitermination protein RfaH compare
MPMX20_02768 -3.0 -4.1 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_03212 -3.0 -7.6 NADH-quinone oxidoreductase subunit H compare
MPMX20_04442 -3.0 -6.6 Sec-independent protein translocase protein TatC compare
MPMX20_03490 -3.0 -7.1 SsrA-binding protein compare
MPMX20_04443 -3.0 -4.4 Sec-independent protein translocase protein TatB compare
MPMX20_01361 -2.9 -10.2 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_03705 -2.9 -10.2 Diaminopimelate decarboxylase compare
MPMX20_03852 -2.8 -13.6 Cystathionine beta-lyase MetC compare
MPMX20_03218 -2.8 -5.3 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_04279 -2.7 -4.2 Shikimate kinase 1 compare
MPMX20_03986 -2.7 -4.7 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_04276 -2.7 -8.2 DNA adenine methylase compare
MPMX20_02635 -2.7 -3.9 Release factor glutamine methyltransferase compare
MPMX20_01607 -2.7 -6.3 Outer membrane protein A compare
MPMX20_00745 -2.7 -6.6 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_02672 -2.7 -20.5 hypothetical protein compare
MPMX20_03206 -2.7 -10.8 NADH-quinone oxidoreductase subunit N compare
MPMX20_04626 -2.7 -5.3 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_03214 -2.5 -10.4 NADH-quinone oxidoreductase subunit F compare
MPMX20_03216 -2.5 -13.3 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_03207 -2.5 -7.7 NADH-quinone oxidoreductase subunit M compare
MPMX20_04552 -2.5 -6.9 ATP-dependent 6-phosphofructokinase isozyme 1 compare
MPMX20_02826 -2.5 -3.5 Cold shock-like protein CspB compare
MPMX20_03019 -2.5 -14.4 hypothetical protein compare
MPMX20_02766 -2.4 -4.5 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_04530 -2.4 -8.5 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_01552 -2.4 -5.6 hypothetical protein compare
MPMX20_03213 -2.4 -11.1 NADH-quinone oxidoreductase subunit G compare
MPMX20_03010 -2.3 -6.9 UDP-glucose 4-epimerase compare
MPMX20_00769 -2.3 -7.3 2-isopropylmalate synthase compare
MPMX20_00807 -2.2 -3.7 Pyruvate dehydrogenase E1 component compare
MPMX20_00086 -2.2 -5.7 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_03208 -2.2 -7.6 NADH-quinone oxidoreductase subunit L compare
MPMX20_00197 -2.2 -2.8 tRNA-Tyr compare
MPMX20_01030 -2.2 -6.4 Lon protease compare
MPMX20_00721 -2.2 -4.1 Chaperone protein DnaJ compare
MPMX20_03210 -2.2 -6.9 NADH-quinone oxidoreductase subunit J compare
MPMX20_00899 -2.2 -2.5 Ribonuclease HI compare
MPMX20_02510 -2.2 -13.0 Anthranilate synthase component 1 compare
MPMX20_00708 -2.1 -6.6 Aerobic respiration control protein ArcA compare
MPMX20_03215 -2.1 -3.7 NADH-quinone oxidoreductase subunit E compare
MPMX20_02646 -2.1 -2.7 hypothetical protein compare
MPMX20_01984 -2.1 -3.0 Ribonuclease T compare
MPMX20_04140 -2.1 -8.4 Malate dehydrogenase compare
MPMX20_00241 -2.0 -10.1 Glucose-6-phosphate isomerase compare
MPMX20_03021 -2.0 -8.9 hypothetical protein compare
MPMX20_00812 -2.0 -7.8 Aconitate hydratase B compare
MPMX20_00102 -1.9 -3.3 hypothetical protein compare
MPMX20_00998 -1.9 -4.0 Sec translocon accessory complex subunit YajC compare
MPMX20_04465 -1.9 -4.2 Tyrosine recombinase XerC compare
MPMX20_00453 -1.8 -1.8 RNA-binding protein Hfq compare
MPMX20_03209 -1.8 -2.7 NADH-quinone oxidoreductase subunit K compare
MPMX20_03211 -1.8 -4.4 NADH-quinone oxidoreductase subunit I compare
MPMX20_03217 -1.7 -4.9 NADH-quinone oxidoreductase subunit B compare
MPMX20_03440 -1.7 -5.4 Elongation factor 4 compare
MPMX20_04393 -1.7 -5.5 Low-affinity inorganic phosphate transporter 1 compare
MPMX20_04489 -1.7 -9.8 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_02701 -1.6 -2.3 Fatty acid metabolism regulator protein compare
MPMX20_03248 -1.6 -3.3 Colicin V production protein compare
MPMX20_00514 -1.6 -6.0 Fructose-1,6-bisphosphatase class 1 compare
MPMX20_00087 -1.6 -2.2 DNA-directed RNA polymerase subunit omega compare
MPMX20_03119 -1.6 -13.8 Galactose/methyl galactoside import ATP-binding protein MglA compare
MPMX20_01286 -1.5 -2.1 Sec-independent protein translocase protein TatE compare
MPMX20_04668 -1.5 -2.1 hypothetical protein compare
MPMX20_01156 -1.5 -4.5 hypothetical protein compare
MPMX20_03742 -1.5 -6.7 HTH-type transcriptional regulator GalR compare
MPMX20_04641 -1.5 -3.2 Phosphate transport system permease protein PstA compare
MPMX20_04463 -1.5 -5.5 DNA helicase II compare
MPMX20_01382 -1.5 -2.8 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
MPMX20_01768 -1.5 -2.7 Large ribosomal RNA subunit accumulation protein YceD compare
MPMX20_01363 -1.4 -5.3 Cytochrome bd-I ubiquinol oxidase subunit X compare
MPMX20_03509 -1.4 -2.0 hypothetical protein compare
MPMX20_00570 -1.4 -9.6 putative BsuMI modification methylase subunit YdiO compare
MPMX20_02767 -1.4 -3.8 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_04639 -1.4 -1.6 Phosphate-binding protein PstS compare
MPMX20_00106 -1.4 -3.3 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_02645 -1.4 -6.3 Ribosome-binding ATPase YchF compare
MPMX20_03801 -1.3 -9.1 Galactose-proton symporter conserved
MPMX20_03641 -1.3 -5.0 Phosphoadenosine phosphosulfate reductase compare
MPMX20_03355 -1.3 -6.1 Phosphoribosylglycinamide formyltransferase compare
MPMX20_03753 -1.3 -4.8 Tyrosine recombinase XerD compare
MPMX20_03706 -1.3 -5.5 Octopine catabolism/uptake operon regulatory protein OccR compare
MPMX20_02997 -1.3 -7.3 Exodeoxyribonuclease I compare
MPMX20_03118 -1.3 -10.0 Galactoside transport system permease protein MglC compare
MPMX20_04601 -1.3 -2.6 DNA polymerase I compare
MPMX20_03285 -1.3 -1.4 hypothetical protein compare
MPMX20_03120 -1.3 -7.9 D-galactose-binding periplasmic protein compare
MPMX20_04385 -1.3 -5.6 hypothetical protein compare
MPMX20_04532 -1.2 -3.4 Met repressor compare
MPMX20_03642 -1.2 -6.4 Sulfite reductase [NADPH] hemoprotein beta-component compare
MPMX20_03090 -1.2 -1.5 Methionine--tRNA ligase compare
MPMX20_01353 -1.2 -4.0 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_00108 -1.2 -9.0 hypothetical protein compare
MPMX20_01351 -1.2 -3.4 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_03037 -1.2 -4.0 hypothetical protein compare
MPMX20_01352 -1.1 -6.2 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_03409 -1.1 -1.4 Iron-binding protein IscA compare
MPMX20_02203 -1.1 -2.4 hypothetical protein compare
MPMX20_01648 -1.1 -1.7 hypothetical protein compare
MPMX20_00452 -1.1 -5.7 tRNA dimethylallyltransferase compare
MPMX20_01447 -1.1 -4.7 Transcriptional regulator MntR compare
MPMX20_03177 -1.1 -4.7 Transcriptional regulatory protein RcsB compare
MPMX20_04598 -1.1 -6.5 Oxygen-independent coproporphyrinogen III oxidase compare
MPMX20_04685 -1.1 -4.4 hypothetical protein compare
MPMX20_02481 -1.1 -4.2 Right origin-binding protein compare
MPMX20_02696 -1.1 -5.3 Murein tetrapeptide carboxypeptidase compare
MPMX20_04275 -1.1 -1.9 Ribulose-phosphate 3-epimerase compare


Specific Phenotypes

For 11 genes in this experiment

For carbon source D-Galactose in Enterobacter sp. TBS_079

For carbon source D-Galactose across organisms