Experiment set9S188 for Methanococcus maripaludis JJ

Compare to:

H2 no stress control

200 most important genes:

  gene name fitness t score description  
MMJJ_RS05445 -5.9 -4.1 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS04200 -5.6 -9.2 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS03670 -5.6 -5.4 precorrin-2 C(20)-methyltransferase compare
MMJJ_RS03270 -5.5 -3.8 ribosome biogenesis/translation initiation ATPase RLI compare
MMJJ_RS00600 -5.4 -5.2 hydroxymethylbilane synthase compare
MMJJ_RS06390 -5.3 -3.7 NADPH-dependent F420 reductase compare
MMJJ_RS00370 -5.3 -3.7 asparagine synthase (glutamine-hydrolyzing) compare
MMJJ_RS06490 -5.2 -3.6 methanogenesis marker 2 protein compare
MMJJ_RS06510 -5.1 -3.5 LL-diaminopimelate aminotransferase compare
MMJJ_RS02090 -5.0 -7.7 tyramine--L-glutamate ligase compare
MMJJ_RS03620 -5.0 -8.3 DUF2097 domain-containing protein compare
MMJJ_RS03200 -4.8 -3.3 uroporphyrinogen-III synthase compare
MMJJ_RS06180 -4.7 -3.3 tryptophan--tRNA ligase compare
MMJJ_RS00570 -4.7 -3.6 ribonuclease P compare
MMJJ_RS03840 -4.6 -4.5 DHH family phosphoesterase compare
MMJJ_RS05650 -4.6 -4.5 formylmethanofuran dehydrogenase subunit B compare
MMJJ_RS03820 -4.6 -5.4 hydrogenase formation protein HypD compare
MMJJ_RS02920 -4.6 -3.7 30S ribosomal protein S27ae compare
MMJJ_RS07360 -4.4 -3.2 TIGR00269 family protein compare
MMJJ_RS07350 -4.3 -4.9 4Fe-4S binding protein compare
MMJJ_RS01750 -4.3 -4.8 ferrous iron transport protein A compare
MMJJ_RS06840 -4.3 -5.0 nickel-dependent hydrogenase large subunit compare
MMJJ_RS07275 -4.2 -4.1 formate--phosphoribosylaminoimidazolecarboxamide ligase compare
MMJJ_RS01810 -4.2 -2.9 methyl coenzyme M reductase system, component A2 compare
MMJJ_RS04970 -4.1 -3.7 DUF655 domain-containing protein compare
MMJJ_RS05590 -4.1 -4.0 homoserine dehydrogenase compare
MMJJ_RS08625 -4.1 -7.9 magnesium/cobalt transporter CorA compare
MMJJ_RS01880 -4.1 -4.9 RlmE family RNA methyltransferase compare
MMJJ_RS06155 -4.1 -7.1 phosphatidylglycerophosphatase A compare
MMJJ_RS05415 -4.1 -4.0 hypothetical protein compare
MMJJ_RS00355 -4.1 -5.5 ribonuclease P protein component 4 compare
MMJJ_RS05225 -4.1 -2.1 Gar1/Naf1 family protein compare
MMJJ_RS08095 -4.0 -6.7 cobyric acid synthase CobQ compare
MMJJ_RS00275 -4.0 -4.3 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS01755 -4.0 -3.9 ferrous iron transport protein B compare
MMJJ_RS03785 -4.0 -3.9 hypothetical protein compare
MMJJ_RS07000 -3.9 -3.4 TrkH family potassium uptake protein compare
MMJJ_RS03760 -3.9 -5.4 hydrogenase maturation nickel metallochaperone HypA compare
MMJJ_RS05070 -3.9 -3.7 DNA primase catalytic subunit PriS compare
MMJJ_RS07785 -3.9 -4.6 fumarate reductase subunit A compare
MMJJ_RS06750 -3.9 -4.5 homoaconitase large subunit compare
MMJJ_RS03005 -3.9 -5.3 Ni-sirohydrochlorin a,c-diamide reductive cyclase catalytic subunit compare
MMJJ_RS06040 -3.9 -5.5 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS04730 -3.9 -4.6 tyrosine decarboxylase MfnA compare
MMJJ_RS05950 -3.8 -5.2 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
MMJJ_RS03615 -3.8 -5.2 cobalt-precorrin-8 methylmutase compare
MMJJ_RS06930 -3.8 -3.4 type II methionyl aminopeptidase compare
MMJJ_RS05575 -3.8 -5.6 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS01350 -3.7 -8.3 sodium:proton antiporter compare
MMJJ_RS05620 -3.7 -6.6 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein compare
MMJJ_RS08055 -3.7 -7.8 methanogenesis marker 14 protein compare
MMJJ_RS03150 -3.7 -8.5 2-phospho-L-lactate transferase compare
MMJJ_RS03580 -3.7 -5.1 TIGR00303 family protein compare
MMJJ_RS01600 -3.6 -5.4 radical SAM protein compare
MMJJ_RS00125 -3.6 -4.3 KEOPS complex subunit Cgi121 compare
MMJJ_RS00270 -3.6 -4.9 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS01870 -3.6 -3.5 methanogenesis marker 15 protein compare
MMJJ_RS07725 -3.5 -9.0 DNA primase DnaG compare
MMJJ_RS06600 -3.5 -3.9 DUF555 domain-containing protein compare
MMJJ_RS07950 -3.5 -5.7 4Fe-4S binding protein compare
MMJJ_RS08535 -3.5 -5.3 NOL1/NOP2/sun family putative RNA methylase compare
MMJJ_RS03190 -3.5 -4.7 phosphopyruvate hydratase compare
MMJJ_RS03895 -3.5 -6.1 hydrogenase expression/formation protein HypE compare
MMJJ_RS01935 -3.5 -6.0 O-phosphoseryl-tRNA(Sec) selenium transferase compare
MMJJ_RS03110 -3.4 -5.2 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS09130 -3.4 -3.0 NFYB/HAP3 family transcription factor subunit compare
MMJJ_RS06625 -3.4 -3.3 pyruvate synthase subunit PorB compare
MMJJ_RS05260 -3.3 -6.9 ATP-grasp domain-containing protein compare
MMJJ_RS06240 -3.3 -4.5 dihydropteroate synthase-like protein compare
MMJJ_RS02275 -3.3 -5.2 nucleotidyltransferase domain-containing protein compare
MMJJ_RS04675 -3.3 -8.2 thiamine pyrophosphate-binding protein compare
MMJJ_RS06175 -3.3 -4.0 DUF1743 domain-containing protein compare
MMJJ_RS07170 -3.3 -6.2 pyridoxal phosphate-dependent aminotransferase compare
MMJJ_RS06255 -3.3 -7.8 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS04790 -3.2 -5.1 biotin--[acetyl-CoA-carboxylase] ligase compare
MMJJ_RS04520 -3.2 -5.7 coenzyme F430 synthase compare
MMJJ_RS00475 -3.2 -3.0 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
MMJJ_RS03125 -3.2 -5.5 GMC oxidoreductase compare
MMJJ_RS04685 -3.2 -9.4 carbamoyltransferase HypF compare
MMJJ_RS04155 -3.2 -8.9 hypothetical protein compare
MMJJ_RS04050 -3.2 -2.6 dihydroneopterin aldolase family protein compare
MMJJ_RS07720 -3.2 -2.9 UPF0058 family protein compare
MMJJ_RS08080 -3.2 -11.9 TIGR00300 family protein compare
MMJJ_RS03055 -3.2 -4.5 hypothetical protein compare
MMJJ_RS08795 -3.1 -4.1 phosphoglucosamine mutase compare
MMJJ_RS07190 -3.1 -5.5 RtcB family protein compare
MMJJ_RS01200 -3.1 -4.5 PRC-barrel domain-containing protein compare
MMJJ_RS05655 -3.1 -6.5 HisA/HisF family protein compare
MMJJ_RS03095 -3.1 -4.2 bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase compare
MMJJ_RS08660 -3.1 -4.2 acetylornithine transaminase compare
MMJJ_RS08155 -3.0 -5.0 cobalt-precorrin-5B (C(1))-methyltransferase CbiD compare
MMJJ_RS06220 -3.0 -5.7 polyamine aminopropyltransferase compare
MMJJ_RS08840 -3.0 -6.0 calcium/sodium antiporter compare
MMJJ_RS04145 -3.0 -11.7 glutamate-1-semialdehyde 2,1-aminomutase compare
MMJJ_RS02045 -2.9 -4.8 molybdenum cofactor guanylyltransferase compare
MMJJ_RS06700 -2.9 -6.4 L-seryl-tRNA(Sec) kinase compare
MMJJ_RS05610 -2.9 -5.6 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS09190 -2.9 -2.9 tryptophan synthase subunit beta compare
MMJJ_RS06695 -2.9 -3.7 amidohydrolase compare
MMJJ_RS05490 -2.9 -4.4 imidazole glycerol phosphate synthase subunit HisF compare
MMJJ_RS05720 -2.9 -4.4 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS05995 -2.9 -3.7 ATP-binding cassette domain-containing protein compare
MMJJ_RS06725 -2.9 -15.1 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS05065 -2.9 -5.2 (4-{4-[2-(gamma-L- glutamylamino)ethyl]phenoxymethyl}furan-2-yl)methanamine synthase compare
MMJJ_RS07155 -2.8 -9.1 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMJJ_RS01345 -2.8 -4.3 (5-formylfuran-3-yl)methyl phosphate synthase compare
MMJJ_RS01355 -2.8 -5.3 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS00195 -2.8 -3.7 precorrin-3B C(17)-methyltransferase compare
MMJJ_RS05295 -2.7 -10.6 cobyrinic acid a,c-diamide synthase compare
MMJJ_RS08010 -2.7 -7.2 phosphoadenosine phosphosulfate reductase family protein compare
MMJJ_RS07410 -2.7 -4.4 methanogenesis marker protein Mmp4/MtxX compare
MMJJ_RS04985 -2.7 -3.3 glutamyl-tRNA reductase compare
MMJJ_RS04800 -2.7 -6.3 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS05810 -2.7 -8.0 precorrin-4 C(11)-methyltransferase compare
MMJJ_RS07245 -2.7 -5.0 amidohydrolase family protein compare
MMJJ_RS03060 -2.6 -4.0 methanogenesis marker 7 protein compare
MMJJ_RS04650 -2.6 -6.1 nitrogenase iron protein compare
MMJJ_RS03170 -2.6 -10.0 DUF5612 domain-containing protein compare
MMJJ_RS06485 -2.6 -3.8 phosphoglycerate kinase compare
MMJJ_RS06880 -2.6 -2.4 EhaG family protein compare
MMJJ_RS00210 -2.6 -3.2 DUF530 family protein compare
MMJJ_RS03660 -2.6 -3.8 DUF447 family protein compare
MMJJ_RS00580 -2.6 -3.8 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG compare
MMJJ_RS08250 -2.5 -7.4 hydrogenase maturation peptidase HycI compare
MMJJ_RS01360 -2.5 -3.8 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS08850 -2.5 -3.9 succinate dehydrogenase/fumarate reductase iron-sulfur subunit compare
MMJJ_RS09135 -2.5 -8.8 archaeosine biosynthesis radical SAM protein RaSEA compare
MMJJ_RS04980 -2.5 -6.3 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase compare
MMJJ_RS08330 -2.5 -4.4 SufD family Fe-S cluster assembly protein compare
MMJJ_RS08340 -2.5 -5.5 archaeoflavoprotein AfpA compare
MMJJ_RS00205 -2.4 -7.1 adenosylcobinamide-phosphate synthase CbiB compare
MMJJ_RS01415 -2.4 -3.8 beta-CASP ribonuclease aCPSF1 compare
MMJJ_RS07430 -2.4 -3.7 ribonuclease VapC compare
MMJJ_RS06760 -2.4 -5.9 Ni-sirohydrochlorin a,c-diamide synthase compare
MMJJ_RS07945 -2.4 -4.1 4Fe-4S binding protein compare
MMJJ_RS03865 -2.4 -1.5 phosphoribosyl-AMP cyclohydrolase compare
MMJJ_RS06865 -2.4 -2.8 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS04670 -2.4 -3.5 DUF2117 domain-containing protein compare
MMJJ_RS01690 -2.4 -3.3 methanogenesis marker 12 protein compare
MMJJ_RS07705 -2.3 -3.5 GTP-binding protein EngB compare
MMJJ_RS04700 -2.3 -6.8 deoxyhypusine synthase compare
MMJJ_RS06185 -2.3 -4.6 cobalamin biosynthesis protein compare
MMJJ_RS05935 -2.3 -3.1 Era-like GTP-binding protein compare
MMJJ_RS00550 -2.3 -7.6 AIR synthase-related protein compare
MMJJ_RS06875 -2.3 -3.8 hypothetical protein compare
MMJJ_RS06215 -2.3 -4.8 agmatinase compare
MMJJ_RS04110 -2.3 -5.6 hypothetical protein compare
MMJJ_RS04565 -2.3 -4.3 sirohydrochlorin nickelochelatase compare
MMJJ_RS07875 -2.3 -2.9 FAD-dependent oxidoreductase compare
MMJJ_RS05155 -2.3 -5.2 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMJJ_RS03815 -2.3 -3.6 nascent polypeptide-associated complex protein compare
MMJJ_RS05380 -2.3 -2.1 hypothetical protein compare
MMJJ_RS07345 -2.3 -6.3 homocysteine biosynthesis protein compare
MMJJ_RS05330 -2.2 -2.6 DNA polymerase II large subunit compare
MMJJ_RS04150 -2.2 -3.5 DUF5379 domain-containing protein compare
MMJJ_RS02040 -2.2 -2.6 Asp-tRNA(Asn) amidotransferase subunit GatC compare
MMJJ_RS04975 -2.2 -2.3 glycosyltransferase family 4 protein compare
MMJJ_RS08320 -2.2 -3.9 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS04595 -2.2 -6.0 hypothetical protein compare
MMJJ_RS06250 -2.1 -2.7 nicotinamide-nucleotide adenylyltransferase compare
MMJJ_RS04655 -2.1 -5.4 FAD-dependent oxidoreductase compare
MMJJ_RS00450 -2.1 -3.1 DUF126 domain-containing protein compare
MMJJ_RS06225 -2.1 -2.1 adenosylmethionine decarboxylase compare
MMJJ_RS01830 -2.1 -2.9 tRNA(Ile)(2)-agmatinylcytidine synthase compare
MMJJ_RS08020 -2.1 -9.6 nucleotidyltransferase domain-containing protein compare
MMJJ_RS01820 -2.1 -5.7 MJ1244 family protein compare
MMJJ_RS03965 -2.0 -2.8 DNA-directed RNA polymerase subunit L compare
MMJJ_RS06110 -2.0 -2.2 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC compare
MMJJ_RS07455 -2.0 -7.4 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS01860 -2.0 -12.0 tRNA guanosine(15) transglycosylase TgtA compare
MMJJ_RS05535 -2.0 -11.1 hypothetical protein compare
MMJJ_RS06805 -2.0 -3.2 monovalent cation/H+ antiporter subunit E compare
MMJJ_RS00560 -2.0 -5.2 homoisocitrate dehydrogenase compare
MMJJ_RS06705 -1.9 -5.1 bifunctional NADP phosphatase/NAD kinase compare
MMJJ_RS04995 -1.9 -4.2 Tfx family DNA-binding protein compare
MMJJ_RS05930 -1.9 -2.0 cell division protein SepF compare
MMJJ_RS06785 -1.9 -6.5 RNA ligase partner protein compare
MMJJ_RS09375 -1.8 -2.4 hypothetical protein compare
MMJJ_RS06855 -1.8 -2.6 DUF2104 domain-containing protein compare
MMJJ_RS09035 -1.8 -5.0 OB-fold nucleic acid binding domain-containing protein compare
MMJJ_RS00360 -1.8 -2.5 adenosylhomocysteinase compare
MMJJ_RS01410 -1.8 -4.7 archaeal proteasome endopeptidase complex subunit beta compare
MMJJ_RS05595 -1.8 -3.0 hypothetical protein compare
MMJJ_RS08620 -1.7 -3.4 DUF373 family protein compare
MMJJ_RS04680 -1.7 -8.6 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMJJ_RS00385 -1.7 -9.4 TIGR00454 family protein compare
MMJJ_RS08230 -1.7 -2.4 ribose-5-phosphate isomerase RpiA compare
MMJJ_RS06005 -1.7 -7.2 energy conserving hydrogenase EhbF compare
MMJJ_RS04770 -1.7 -2.5 formate-dependent phosphoribosylglycinamide formyltransferase compare
MMJJ_RS03065 -1.7 -12.3 CBS domain-containing protein compare
MMJJ_RS06015 -1.7 -8.8 Na(+)/H(+) antiporter subunit B compare
MMJJ_RS00645 -1.7 -10.6 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMJJ_RS02855 -1.7 -7.6 DEAD/DEAH box helicase compare
MMJJ_RS04615 -1.6 -4.0 methanogenesis marker 3 protein compare
MMJJ_RS00425 -1.6 -4.3 hypothetical protein compare
MMJJ_RS05645 -1.6 -2.1 4Fe-4S binding protein compare
MMJJ_RS07980 -1.6 -9.0 biotin synthase BioB compare
MMJJ_RS03845 -1.6 -3.3 translation initiation factor IF-2 compare
MMJJ_RS07370 -1.6 -3.7 tRNA 4-thiouridine(8) synthase ThiI compare
MMJJ_RS06010 -1.6 -5.1 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in hydrogen no stress control experiments