Experiment set9S183 for Methanococcus maripaludis JJ

Compare to:

Formate no stress control

200 most important genes:

  gene name fitness t score description  
MMJJ_RS07785 -5.5 -3.8 fumarate reductase subunit A compare
MMJJ_RS05930 -5.4 -3.7 cell division protein SepF compare
MMJJ_RS07950 -5.3 -5.2 4Fe-4S binding protein compare
MMJJ_RS05650 -5.3 -3.7 formylmethanofuran dehydrogenase subunit B compare
MMJJ_RS04200 -5.2 -9.9 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS06625 -5.1 -3.9 pyruvate synthase subunit PorB compare
MMJJ_RS05610 -4.6 -6.3 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS03580 -4.6 -5.4 TIGR00303 family protein compare
MMJJ_RS01750 -4.6 -4.9 ferrous iron transport protein A compare
MMJJ_RS01935 -4.5 -6.7 O-phosphoseryl-tRNA(Sec) selenium transferase compare
MMJJ_RS04975 -4.5 -4.0 glycosyltransferase family 4 protein compare
MMJJ_RS07875 -4.4 -3.1 FAD-dependent oxidoreductase compare
MMJJ_RS00275 -4.4 -4.6 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS07470 -4.3 -2.9 50S ribosome-binding GTPase compare
MMJJ_RS06040 -4.2 -6.1 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS06875 -4.2 -4.7 hypothetical protein compare
MMJJ_RS05070 -4.2 -4.0 DNA primase catalytic subunit PriS compare
MMJJ_RS06860 -4.1 -5.5 hypothetical protein compare
MMJJ_RS05620 -4.0 -6.6 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein compare
MMJJ_RS02090 -4.0 -7.7 tyramine--L-glutamate ligase compare
MMJJ_RS06180 -4.0 -4.7 tryptophan--tRNA ligase compare
MMJJ_RS04970 -3.9 -3.2 DUF655 domain-containing protein compare
MMJJ_RS03820 -3.9 -6.5 hydrogenase formation protein HypD compare
MMJJ_RS07655 -3.8 -14.8 hypothetical protein compare
MMJJ_RS03620 -3.8 -7.7 DUF2097 domain-containing protein compare
MMJJ_RS00355 -3.8 -4.5 ribonuclease P protein component 4 compare
MMJJ_RS01755 -3.7 -4.3 ferrous iron transport protein B compare
MMJJ_RS05490 -3.7 -4.3 imidazole glycerol phosphate synthase subunit HisF compare
MMJJ_RS07350 -3.7 -5.1 4Fe-4S binding protein compare
MMJJ_RS04800 -3.6 -7.5 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS03840 -3.6 -6.4 DHH family phosphoesterase compare
MMJJ_RS07720 -3.6 -4.5 UPF0058 family protein compare
MMJJ_RS06490 -3.5 -5.2 methanogenesis marker 2 protein compare
MMJJ_RS02275 -3.4 -6.9 nucleotidyltransferase domain-containing protein compare
MMJJ_RS05260 -3.4 -7.6 ATP-grasp domain-containing protein compare
MMJJ_RS00125 -3.4 -4.0 KEOPS complex subunit Cgi121 compare
MMJJ_RS03110 -3.4 -5.1 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS08320 -3.4 -3.9 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS03895 -3.3 -4.5 hydrogenase expression/formation protein HypE compare
MMJJ_RS05330 -3.3 -3.8 DNA polymerase II large subunit compare
MMJJ_RS08660 -3.3 -4.9 acetylornithine transaminase compare
MMJJ_RS06510 -3.2 -4.5 LL-diaminopimelate aminotransferase compare
MMJJ_RS06840 -3.2 -5.0 nickel-dependent hydrogenase large subunit compare
MMJJ_RS02045 -3.2 -4.4 molybdenum cofactor guanylyltransferase compare
MMJJ_RS02935 -3.2 -2.9 DNA-directed RNA polymerase subunit E'' compare
MMJJ_RS09175 -3.2 -2.4 anthranilate synthase component I compare
MMJJ_RS01360 -3.1 -3.8 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS07190 -3.1 -5.9 RtcB family protein compare
MMJJ_RS05720 -3.1 -4.7 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS04685 -3.1 -12.1 carbamoyltransferase HypF compare
MMJJ_RS08095 -3.1 -6.2 cobyric acid synthase CobQ compare
MMJJ_RS06485 -3.0 -4.6 phosphoglycerate kinase compare
MMJJ_RS01475 -3.0 -3.2 signal recognition particle-docking protein FtsY compare
MMJJ_RS07705 -3.0 -4.6 GTP-binding protein EngB compare
MMJJ_RS01355 -3.0 -5.0 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS03005 -3.0 -5.4 Ni-sirohydrochlorin a,c-diamide reductive cyclase catalytic subunit compare
MMJJ_RS07360 -3.0 -2.1 TIGR00269 family protein compare
MMJJ_RS06390 -3.0 -3.2 NADPH-dependent F420 reductase compare
MMJJ_RS03760 -3.0 -5.6 hydrogenase maturation nickel metallochaperone HypA compare
MMJJ_RS07810 -3.0 -17.0 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMJJ_RS07815 -3.0 -16.2 2-oxoacid:acceptor oxidoreductase family protein compare
MMJJ_RS03150 -2.9 -9.0 2-phospho-L-lactate transferase compare
MMJJ_RS03865 -2.9 -1.9 phosphoribosyl-AMP cyclohydrolase compare
MMJJ_RS03270 -2.9 -1.9 ribosome biogenesis/translation initiation ATPase RLI compare
MMJJ_RS04790 -2.9 -5.8 biotin--[acetyl-CoA-carboxylase] ligase compare
MMJJ_RS09190 -2.9 -2.9 tryptophan synthase subunit beta compare
MMJJ_RS08330 -2.8 -5.0 SufD family Fe-S cluster assembly protein compare
MMJJ_RS05950 -2.8 -5.2 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
MMJJ_RS05065 -2.8 -5.5 (4-{4-[2-(gamma-L- glutamylamino)ethyl]phenoxymethyl}furan-2-yl)methanamine synthase compare
MMJJ_RS08055 -2.8 -7.4 methanogenesis marker 14 protein compare
MMJJ_RS07725 -2.8 -6.3 DNA primase DnaG compare
MMJJ_RS08625 -2.7 -9.2 magnesium/cobalt transporter CorA compare
MMJJ_RS05590 -2.7 -2.9 homoserine dehydrogenase compare
MMJJ_RS01600 -2.7 -2.6 radical SAM protein compare
MMJJ_RS01345 -2.7 -4.8 (5-formylfuran-3-yl)methyl phosphate synthase compare
MMJJ_RS01350 -2.6 -6.1 sodium:proton antiporter compare
MMJJ_RS08080 -2.6 -9.4 TIGR00300 family protein compare
MMJJ_RS04995 -2.6 -7.1 Tfx family DNA-binding protein compare
MMJJ_RS04155 -2.6 -8.8 hypothetical protein compare
MMJJ_RS07805 -2.6 -11.8 ferredoxin family protein compare
MMJJ_RS03190 -2.6 -4.5 phosphopyruvate hydratase compare
MMJJ_RS04700 -2.6 -8.0 deoxyhypusine synthase compare
MMJJ_RS06255 -2.5 -7.5 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS04675 -2.5 -6.6 thiamine pyrophosphate-binding protein compare
MMJJ_RS05995 -2.5 -4.5 ATP-binding cassette domain-containing protein compare
MMJJ_RS00270 -2.5 -4.8 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS06155 -2.5 -7.1 phosphatidylglycerophosphatase A compare
MMJJ_RS05655 -2.5 -6.6 HisA/HisF family protein compare
MMJJ_RS03125 -2.5 -5.4 GMC oxidoreductase compare
MMJJ_RS06215 -2.5 -4.9 agmatinase compare
MMJJ_RS05190 -2.5 -9.6 gamma carbonic anhydrase family protein compare
MMJJ_RS07410 -2.5 -6.5 methanogenesis marker protein Mmp4/MtxX compare
MMJJ_RS03875 -2.4 -5.3 CBS domain-containing protein compare
MMJJ_RS08795 -2.4 -3.7 phosphoglucosamine mutase compare
MMJJ_RS03615 -2.4 -3.7 cobalt-precorrin-8 methylmutase compare
MMJJ_RS04655 -2.4 -6.0 FAD-dependent oxidoreductase compare
MMJJ_RS00600 -2.4 -4.4 hydroxymethylbilane synthase compare
MMJJ_RS06110 -2.3 -3.2 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC compare
MMJJ_RS07345 -2.3 -6.2 homocysteine biosynthesis protein compare
MMJJ_RS06930 -2.3 -3.0 type II methionyl aminopeptidase compare
MMJJ_RS05155 -2.3 -8.1 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMJJ_RS04110 -2.3 -5.3 hypothetical protein compare
MMJJ_RS06885 -2.2 -2.3 EhaF family protein compare
MMJJ_RS07945 -2.2 -2.9 4Fe-4S binding protein compare
MMJJ_RS02920 -2.2 -2.9 30S ribosomal protein S27ae compare
MMJJ_RS04520 -2.2 -4.5 coenzyme F430 synthase compare
MMJJ_RS04145 -2.2 -9.5 glutamate-1-semialdehyde 2,1-aminomutase compare
MMJJ_RS08155 -2.2 -4.7 cobalt-precorrin-5B (C(1))-methyltransferase CbiD compare
MMJJ_RS07245 -2.2 -5.6 amidohydrolase family protein compare
MMJJ_RS01415 -2.2 -3.8 beta-CASP ribonuclease aCPSF1 compare
MMJJ_RS03055 -2.2 -4.5 hypothetical protein compare
MMJJ_RS00550 -2.2 -8.1 AIR synthase-related protein compare
MMJJ_RS06240 -2.2 -3.6 dihydropteroate synthase-like protein compare
MMJJ_RS07035 -2.2 -2.1 glycosyl transferase compare
MMJJ_RS06760 -2.1 -5.4 Ni-sirohydrochlorin a,c-diamide synthase compare
MMJJ_RS08620 -2.1 -3.6 DUF373 family protein compare
MMJJ_RS07665 -2.1 -18.0 formate dehydrogenase subunit alpha compare
MMJJ_RS08250 -2.1 -6.2 hydrogenase maturation peptidase HycI compare
MMJJ_RS06910 -2.1 -3.1 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS00205 -2.1 -5.3 adenosylcobinamide-phosphate synthase CbiB compare
MMJJ_RS01690 -2.1 -4.0 methanogenesis marker 12 protein compare
MMJJ_RS03845 -2.1 -3.6 translation initiation factor IF-2 compare
MMJJ_RS03670 -2.1 -5.4 precorrin-2 C(20)-methyltransferase compare
MMJJ_RS03295 -2.1 -13.8 PHP domain-containing protein compare
MMJJ_RS06000 -2.1 -7.7 cation:proton antiporter subunit C compare
MMJJ_RS00560 -2.1 -4.3 homoisocitrate dehydrogenase compare
MMJJ_RS07670 -2.1 -16.2 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain compare
MMJJ_RS07170 -2.1 -4.2 pyridoxal phosphate-dependent aminotransferase compare
MMJJ_RS05225 -2.0 -1.2 Gar1/Naf1 family protein compare
MMJJ_RS08340 -2.0 -4.8 archaeoflavoprotein AfpA compare
MMJJ_RS05415 -2.0 -2.8 hypothetical protein compare
MMJJ_RS00570 -2.0 -2.2 ribonuclease P compare
MMJJ_RS05445 -2.0 -3.3 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS09375 -2.0 -1.9 hypothetical protein compare
MMJJ_RS08840 -2.0 -5.3 calcium/sodium antiporter compare
MMJJ_RS00580 -2.0 -2.1 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG compare
MMJJ_RS06225 -2.0 -2.7 adenosylmethionine decarboxylase compare
MMJJ_RS04730 -2.0 -2.3 tyrosine decarboxylase MfnA compare
MMJJ_RS08020 -2.0 -10.8 nucleotidyltransferase domain-containing protein compare
MMJJ_RS06855 -2.0 -1.9 DUF2104 domain-containing protein compare
MMJJ_RS06695 -2.0 -3.3 amidohydrolase compare
MMJJ_RS07155 -1.9 -8.5 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMJJ_RS06185 -1.9 -4.0 cobalamin biosynthesis protein compare
MMJJ_RS00370 -1.9 -2.4 asparagine synthase (glutamine-hydrolyzing) compare
MMJJ_RS08480 -1.9 -8.3 hydroxyethylthiazole kinase compare
MMJJ_RS06785 -1.9 -7.4 RNA ligase partner protein compare
MMJJ_RS04485 -1.9 -9.2 riboflavin synthase compare
MMJJ_RS06725 -1.9 -12.1 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS04595 -1.9 -4.3 hypothetical protein compare
MMJJ_RS03170 -1.9 -6.9 DUF5612 domain-containing protein compare
MMJJ_RS04615 -1.9 -3.7 methanogenesis marker 3 protein compare
MMJJ_RS06010 -1.9 -7.3 hypothetical protein compare
MMJJ_RS06865 -1.9 -2.2 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS05295 -1.8 -9.2 cobyrinic acid a,c-diamide synthase compare
MMJJ_RS00215 -1.8 -3.0 CCA tRNA nucleotidyltransferase compare
MMJJ_RS03200 -1.8 -2.5 uroporphyrinogen-III synthase compare
MMJJ_RS06015 -1.8 -10.0 Na(+)/H(+) antiporter subunit B compare
MMJJ_RS05810 -1.8 -7.0 precorrin-4 C(11)-methyltransferase compare
MMJJ_RS05540 -1.8 -14.2 LysR family transcriptional regulator compare
MMJJ_RS02200 -1.8 -8.3 chorismate pyruvate-lyase family protein compare
MMJJ_RS06175 -1.8 -2.8 DUF1743 domain-containing protein compare
MMJJ_RS05575 -1.8 -5.1 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS06035 -1.8 -9.6 NADH-quinone oxidoreductase subunit B family protein compare
MMJJ_RS04650 -1.8 -7.1 nitrogenase iron protein compare
MMJJ_RS03785 -1.8 -3.8 hypothetical protein compare
MMJJ_RS06250 -1.7 -2.3 nicotinamide-nucleotide adenylyltransferase compare
MMJJ_RS09055 -1.7 -8.7 NFACT family protein compare
MMJJ_RS01815 -1.7 -4.1 DUF134 domain-containing protein compare
MMJJ_RS06005 -1.7 -8.2 energy conserving hydrogenase EhbF compare
MMJJ_RS07415 -1.7 -3.2 polyprenyl diphosphate synthase compare
MMJJ_RS04150 -1.7 -2.5 DUF5379 domain-containing protein compare
MMJJ_RS04985 -1.7 -2.9 glutamyl-tRNA reductase compare
MMJJ_RS04670 -1.7 -4.6 DUF2117 domain-containing protein compare
MMJJ_RS03160 -1.7 -8.6 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS07430 -1.7 -4.5 ribonuclease VapC compare
MMJJ_RS05380 -1.7 -2.0 hypothetical protein compare
MMJJ_RS07370 -1.7 -3.2 tRNA 4-thiouridine(8) synthase ThiI compare
MMJJ_RS06915 -1.7 -9.9 helix-turn-helix domain-containing protein compare
MMJJ_RS01880 -1.7 -2.7 RlmE family RNA methyltransferase compare
MMJJ_RS08850 -1.7 -3.6 succinate dehydrogenase/fumarate reductase iron-sulfur subunit compare
MMJJ_RS00070 -1.7 -3.1 CooT family nickel-binding protein compare
MMJJ_RS01820 -1.7 -3.6 MJ1244 family protein compare
MMJJ_RS08405 -1.7 -10.4 nickel-dependent hydrogenase large subunit compare
MMJJ_RS06805 -1.7 -2.8 monovalent cation/H+ antiporter subunit E compare
MMJJ_RS00040 -1.7 -8.6 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMJJ_RS09130 -1.7 -1.6 NFYB/HAP3 family transcription factor subunit compare
MMJJ_RS03095 -1.7 -2.8 bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase compare
MMJJ_RS00210 -1.7 -2.7 DUF530 family protein compare
MMJJ_RS03500 -1.7 -11.6 F420-dependent methylenetetrahydromethanopterin dehydrogenase compare
MMJJ_RS01410 -1.7 -4.5 archaeal proteasome endopeptidase complex subunit beta compare
MMJJ_RS08010 -1.7 -6.8 phosphoadenosine phosphosulfate reductase family protein compare
MMJJ_RS01810 -1.6 -2.1 methyl coenzyme M reductase system, component A2 compare
MMJJ_RS01830 -1.6 -2.7 tRNA(Ile)(2)-agmatinylcytidine synthase compare
MMJJ_RS05645 -1.6 -3.1 4Fe-4S binding protein compare
MMJJ_RS06220 -1.6 -3.8 polyamine aminopropyltransferase compare
MMJJ_RS06025 -1.6 -13.7 4Fe-4S binding protein compare
MMJJ_RS00075 -1.6 -9.8 AAA family ATPase compare
MMJJ_RS08535 -1.6 -3.3 NOL1/NOP2/sun family putative RNA methylase compare
MMJJ_RS00045 -1.6 -11.3 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMJJ_RS04770 -1.6 -2.6 formate-dependent phosphoribosylglycinamide formyltransferase compare


Specific Phenotypes

For 2 genes in this experiment