Experiment set9S182 for Methanococcus maripaludis JJ

Compare to:

Formate no stress control

200 most important genes:

  gene name fitness t score description  
MMJJ_RS04970 -5.8 -4.0 DUF655 domain-containing protein compare
MMJJ_RS04730 -5.3 -3.7 tyrosine decarboxylase MfnA compare
MMJJ_RS00275 -4.9 -4.7 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS03865 -4.8 -3.0 phosphoribosyl-AMP cyclohydrolase compare
MMJJ_RS03895 -4.8 -6.6 hydrogenase expression/formation protein HypE compare
MMJJ_RS04200 -4.6 -9.4 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS01355 -4.5 -4.4 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS03760 -4.5 -6.1 hydrogenase maturation nickel metallochaperone HypA compare
MMJJ_RS07350 -4.4 -5.5 4Fe-4S binding protein compare
MMJJ_RS00450 -4.4 -4.0 DUF126 domain-containing protein compare
MMJJ_RS05610 -4.3 -6.6 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS01935 -4.2 -6.4 O-phosphoseryl-tRNA(Sec) selenium transferase compare
MMJJ_RS06485 -4.2 -4.9 phosphoglycerate kinase compare
MMJJ_RS06910 -4.2 -5.7 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS03840 -4.0 -6.1 DHH family phosphoesterase compare
MMJJ_RS02920 -4.0 -4.2 30S ribosomal protein S27ae compare
MMJJ_RS07720 -4.0 -3.3 UPF0058 family protein compare
MMJJ_RS09175 -4.0 -2.1 anthranilate synthase component I compare
MMJJ_RS06110 -3.9 -3.8 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC compare
MMJJ_RS00355 -3.9 -4.6 ribonuclease P protein component 4 compare
MMJJ_RS05620 -3.8 -6.8 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein compare
MMJJ_RS00600 -3.8 -4.5 hydroxymethylbilane synthase compare
MMJJ_RS05330 -3.8 -3.6 DNA polymerase II large subunit compare
MMJJ_RS07655 -3.8 -14.2 hypothetical protein compare
MMJJ_RS00370 -3.7 -3.0 asparagine synthase (glutamine-hydrolyzing) compare
MMJJ_RS01600 -3.6 -4.5 radical SAM protein compare
MMJJ_RS03055 -3.6 -4.7 hypothetical protein compare
MMJJ_RS08625 -3.5 -9.3 magnesium/cobalt transporter CorA compare
MMJJ_RS03620 -3.4 -7.1 DUF2097 domain-containing protein compare
MMJJ_RS05650 -3.2 -4.9 formylmethanofuran dehydrogenase subunit B compare
MMJJ_RS05445 -3.2 -2.4 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS07725 -3.2 -8.6 DNA primase DnaG compare
MMJJ_RS06250 -3.2 -4.4 nicotinamide-nucleotide adenylyltransferase compare
MMJJ_RS05260 -3.2 -7.2 ATP-grasp domain-containing protein compare
MMJJ_RS06860 -3.1 -4.5 hypothetical protein compare
MMJJ_RS04155 -3.1 -9.9 hypothetical protein compare
MMJJ_RS01870 -3.1 -3.5 methanogenesis marker 15 protein compare
MMJJ_RS05490 -3.1 -4.7 imidazole glycerol phosphate synthase subunit HisF compare
MMJJ_RS06625 -3.1 -3.5 pyruvate synthase subunit PorB compare
MMJJ_RS08840 -3.1 -5.6 calcium/sodium antiporter compare
MMJJ_RS08850 -3.1 -4.5 succinate dehydrogenase/fumarate reductase iron-sulfur subunit compare
MMJJ_RS07950 -3.0 -5.4 4Fe-4S binding protein compare
MMJJ_RS00270 -3.0 -4.4 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS08055 -3.0 -6.9 methanogenesis marker 14 protein compare
MMJJ_RS04675 -3.0 -7.3 thiamine pyrophosphate-binding protein compare
MMJJ_RS06180 -3.0 -4.5 tryptophan--tRNA ligase compare
MMJJ_RS07000 -3.0 -2.9 TrkH family potassium uptake protein compare
MMJJ_RS00125 -3.0 -4.0 KEOPS complex subunit Cgi121 compare
MMJJ_RS06240 -2.9 -4.6 dihydropteroate synthase-like protein compare
MMJJ_RS03110 -2.9 -5.1 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS08320 -2.9 -3.3 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS07275 -2.9 -4.3 formate--phosphoribosylaminoimidazolecarboxamide ligase compare
MMJJ_RS00210 -2.8 -3.6 DUF530 family protein compare
MMJJ_RS04685 -2.8 -10.8 carbamoyltransferase HypF compare
MMJJ_RS02040 -2.8 -2.9 Asp-tRNA(Asn) amidotransferase subunit GatC compare
MMJJ_RS00570 -2.8 -2.9 ribonuclease P compare
MMJJ_RS08535 -2.8 -4.4 NOL1/NOP2/sun family putative RNA methylase compare
MMJJ_RS07945 -2.8 -4.0 4Fe-4S binding protein compare
MMJJ_RS03200 -2.8 -3.8 uroporphyrinogen-III synthase compare
MMJJ_RS07810 -2.8 -16.1 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMJJ_RS06855 -2.8 -3.0 DUF2104 domain-containing protein compare
MMJJ_RS02090 -2.8 -6.7 tyramine--L-glutamate ligase compare
MMJJ_RS04800 -2.8 -7.9 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS06510 -2.8 -4.4 LL-diaminopimelate aminotransferase compare
MMJJ_RS01750 -2.7 -4.6 ferrous iron transport protein A compare
MMJJ_RS02935 -2.7 -4.7 DNA-directed RNA polymerase subunit E'' compare
MMJJ_RS06905 -2.7 -3.5 hypothetical protein compare
MMJJ_RS08795 -2.7 -3.3 phosphoglucosamine mutase compare
MMJJ_RS03785 -2.7 -3.6 hypothetical protein compare
MMJJ_RS07815 -2.7 -16.3 2-oxoacid:acceptor oxidoreductase family protein compare
MMJJ_RS00215 -2.6 -3.1 CCA tRNA nucleotidyltransferase compare
MMJJ_RS04995 -2.6 -8.6 Tfx family DNA-binding protein compare
MMJJ_RS07245 -2.6 -7.0 amidohydrolase family protein compare
MMJJ_RS03190 -2.6 -4.2 phosphopyruvate hydratase compare
MMJJ_RS05380 -2.6 -2.2 hypothetical protein compare
MMJJ_RS05575 -2.6 -6.1 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS06225 -2.6 -3.0 adenosylmethionine decarboxylase compare
MMJJ_RS05415 -2.6 -3.8 hypothetical protein compare
MMJJ_RS01755 -2.6 -3.5 ferrous iron transport protein B compare
MMJJ_RS05155 -2.6 -5.1 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMJJ_RS03615 -2.5 -4.1 cobalt-precorrin-8 methylmutase compare
MMJJ_RS05935 -2.5 -2.6 Era-like GTP-binding protein compare
MMJJ_RS04655 -2.5 -5.8 FAD-dependent oxidoreductase compare
MMJJ_RS06255 -2.5 -8.1 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS05065 -2.5 -7.5 (4-{4-[2-(gamma-L- glutamylamino)ethyl]phenoxymethyl}furan-2-yl)methanamine synthase compare
MMJJ_RS08660 -2.5 -4.6 acetylornithine transaminase compare
MMJJ_RS03670 -2.5 -6.3 precorrin-2 C(20)-methyltransferase compare
MMJJ_RS08620 -2.5 -3.3 DUF373 family protein compare
MMJJ_RS05930 -2.4 -2.5 cell division protein SepF compare
MMJJ_RS05655 -2.4 -6.0 HisA/HisF family protein compare
MMJJ_RS09190 -2.4 -2.6 tryptophan synthase subunit beta compare
MMJJ_RS05995 -2.4 -3.1 ATP-binding cassette domain-containing protein compare
MMJJ_RS04975 -2.4 -2.9 glycosyltransferase family 4 protein compare
MMJJ_RS00560 -2.4 -4.2 homoisocitrate dehydrogenase compare
MMJJ_RS00550 -2.4 -9.1 AIR synthase-related protein compare
MMJJ_RS05190 -2.4 -10.5 gamma carbonic anhydrase family protein compare
MMJJ_RS04790 -2.4 -5.3 biotin--[acetyl-CoA-carboxylase] ligase compare
MMJJ_RS08080 -2.4 -11.8 TIGR00300 family protein compare
MMJJ_RS06040 -2.3 -5.4 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS04050 -2.3 -2.5 dihydroneopterin aldolase family protein compare
MMJJ_RS07805 -2.3 -10.3 ferredoxin family protein compare
MMJJ_RS07785 -2.3 -2.6 fumarate reductase subunit A compare
MMJJ_RS07705 -2.3 -3.2 GTP-binding protein EngB compare
MMJJ_RS06875 -2.3 -4.1 hypothetical protein compare
MMJJ_RS04520 -2.3 -5.8 coenzyme F430 synthase compare
MMJJ_RS07415 -2.3 -3.4 polyprenyl diphosphate synthase compare
MMJJ_RS06185 -2.3 -4.5 cobalamin biosynthesis protein compare
MMJJ_RS07345 -2.2 -5.4 homocysteine biosynthesis protein compare
MMJJ_RS07430 -2.2 -3.4 ribonuclease VapC compare
MMJJ_RS01350 -2.2 -5.6 sodium:proton antiporter compare
MMJJ_RS05645 -2.2 -3.3 4Fe-4S binding protein compare
MMJJ_RS01360 -2.2 -3.6 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS08095 -2.2 -5.5 cobyric acid synthase CobQ compare
MMJJ_RS06930 -2.2 -4.1 type II methionyl aminopeptidase compare
MMJJ_RS06695 -2.2 -3.6 amidohydrolase compare
MMJJ_RS06705 -2.2 -5.9 bifunctional NADP phosphatase/NAD kinase compare
MMJJ_RS06865 -2.2 -2.5 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS03150 -2.1 -8.0 2-phospho-L-lactate transferase compare
MMJJ_RS03170 -2.1 -6.5 DUF5612 domain-containing protein compare
MMJJ_RS02275 -2.1 -4.3 nucleotidyltransferase domain-containing protein compare
MMJJ_RS07360 -2.1 -2.9 TIGR00269 family protein compare
MMJJ_RS06840 -2.1 -4.7 nickel-dependent hydrogenase large subunit compare
MMJJ_RS03820 -2.1 -4.5 hydrogenase formation protein HypD compare
MMJJ_RS06390 -2.1 -2.4 NADPH-dependent F420 reductase compare
MMJJ_RS07190 -2.0 -4.9 RtcB family protein compare
MMJJ_RS04700 -2.0 -7.4 deoxyhypusine synthase compare
MMJJ_RS01345 -2.0 -4.5 (5-formylfuran-3-yl)methyl phosphate synthase compare
MMJJ_RS06725 -2.0 -12.4 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS08250 -2.0 -7.7 hydrogenase maturation peptidase HycI compare
MMJJ_RS07665 -2.0 -16.6 formate dehydrogenase subunit alpha compare
MMJJ_RS09375 -2.0 -1.9 hypothetical protein compare
MMJJ_RS08020 -2.0 -10.2 nucleotidyltransferase domain-containing protein compare
MMJJ_RS03875 -2.0 -3.8 CBS domain-containing protein compare
MMJJ_RS03270 -2.0 -2.4 ribosome biogenesis/translation initiation ATPase RLI compare
MMJJ_RS07155 -2.0 -9.2 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMJJ_RS07670 -2.0 -15.6 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain compare
MMJJ_RS00580 -2.0 -3.1 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG compare
MMJJ_RS03295 -1.9 -11.7 PHP domain-containing protein compare
MMJJ_RS06000 -1.9 -7.8 cation:proton antiporter subunit C compare
MMJJ_RS05295 -1.9 -9.9 cobyrinic acid a,c-diamide synthase compare
MMJJ_RS09130 -1.9 -2.5 NFYB/HAP3 family transcription factor subunit compare
MMJJ_RS06490 -1.9 -2.8 methanogenesis marker 2 protein compare
MMJJ_RS03060 -1.9 -3.1 methanogenesis marker 7 protein compare
MMJJ_RS04145 -1.9 -10.7 glutamate-1-semialdehyde 2,1-aminomutase compare
MMJJ_RS07410 -1.9 -4.4 methanogenesis marker protein Mmp4/MtxX compare
MMJJ_RS05950 -1.9 -4.6 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
MMJJ_RS03125 -1.9 -4.7 GMC oxidoreductase compare
MMJJ_RS08480 -1.9 -9.7 hydroxyethylthiazole kinase compare
MMJJ_RS04615 -1.9 -4.5 methanogenesis marker 3 protein compare
MMJJ_RS04485 -1.9 -11.5 riboflavin synthase compare
MMJJ_RS05225 -1.9 -1.4 Gar1/Naf1 family protein compare
MMJJ_RS06785 -1.9 -8.3 RNA ligase partner protein compare
MMJJ_RS04980 -1.8 -4.3 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase compare
MMJJ_RS04985 -1.8 -2.4 glutamyl-tRNA reductase compare
MMJJ_RS08340 -1.8 -5.0 archaeoflavoprotein AfpA compare
MMJJ_RS03160 -1.8 -9.4 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS06175 -1.8 -3.8 DUF1743 domain-containing protein compare
MMJJ_RS04565 -1.8 -2.8 sirohydrochlorin nickelochelatase compare
MMJJ_RS00360 -1.8 -3.4 adenosylhomocysteinase compare
MMJJ_RS03005 -1.8 -4.3 Ni-sirohydrochlorin a,c-diamide reductive cyclase catalytic subunit compare
MMJJ_RS06220 -1.8 -4.2 polyamine aminopropyltransferase compare
MMJJ_RS05070 -1.8 -2.8 DNA primase catalytic subunit PriS compare
MMJJ_RS03845 -1.8 -4.3 translation initiation factor IF-2 compare
MMJJ_RS05540 -1.8 -14.3 LysR family transcriptional regulator compare
MMJJ_RS06750 -1.8 -2.2 homoaconitase large subunit compare
MMJJ_RS06155 -1.8 -5.9 phosphatidylglycerophosphatase A compare
MMJJ_RS08155 -1.7 -3.5 cobalt-precorrin-5B (C(1))-methyltransferase CbiD compare
MMJJ_RS06805 -1.7 -3.5 monovalent cation/H+ antiporter subunit E compare
MMJJ_RS06015 -1.7 -9.6 Na(+)/H(+) antiporter subunit B compare
MMJJ_RS06025 -1.7 -13.7 4Fe-4S binding protein compare
MMJJ_RS05590 -1.7 -2.5 homoserine dehydrogenase compare
MMJJ_RS05720 -1.7 -3.4 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS00205 -1.7 -5.8 adenosylcobinamide-phosphate synthase CbiB compare
MMJJ_RS01865 -1.7 -4.1 peptidyl-tRNA hydrolase Pth2 compare
MMJJ_RS06915 -1.7 -9.8 helix-turn-helix domain-containing protein compare
MMJJ_RS01815 -1.7 -4.2 DUF134 domain-containing protein compare
MMJJ_RS06010 -1.7 -7.5 hypothetical protein compare
MMJJ_RS06760 -1.7 -5.9 Ni-sirohydrochlorin a,c-diamide synthase compare
MMJJ_RS03500 -1.7 -10.9 F420-dependent methylenetetrahydromethanopterin dehydrogenase compare
MMJJ_RS03660 -1.7 -2.6 DUF447 family protein compare
MMJJ_RS06005 -1.7 -7.0 energy conserving hydrogenase EhbF compare
MMJJ_RS01410 -1.6 -4.3 archaeal proteasome endopeptidase complex subunit beta compare
MMJJ_RS03815 -1.6 -1.9 nascent polypeptide-associated complex protein compare
MMJJ_RS04670 -1.6 -4.0 DUF2117 domain-containing protein compare
MMJJ_RS03580 -1.6 -3.2 TIGR00303 family protein compare
MMJJ_RS04110 -1.6 -5.7 hypothetical protein compare
MMJJ_RS08035 -1.6 -8.0 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMJJ_RS08330 -1.6 -2.0 SufD family Fe-S cluster assembly protein compare
MMJJ_RS07715 -1.6 -1.9 UbiD family decarboxylase compare
MMJJ_RS06700 -1.6 -4.5 L-seryl-tRNA(Sec) kinase compare
MMJJ_RS05360 -1.6 -7.5 nickel-responsive transcriptional regulator NikR compare
MMJJ_RS06035 -1.6 -9.1 NADH-quinone oxidoreductase subunit B family protein compare
MMJJ_RS08010 -1.5 -6.0 phosphoadenosine phosphosulfate reductase family protein compare
MMJJ_RS06215 -1.5 -3.6 agmatinase compare
MMJJ_RS01690 -1.5 -3.2 methanogenesis marker 12 protein compare
MMJJ_RS08405 -1.5 -9.8 nickel-dependent hydrogenase large subunit compare
MMJJ_RS03650 -1.5 -5.0 class I SAM-dependent methyltransferase family protein compare
MMJJ_RS09055 -1.5 -7.0 NFACT family protein compare
MMJJ_RS04770 -1.5 -2.1 formate-dependent phosphoribosylglycinamide formyltransferase compare
MMJJ_RS00045 -1.5 -11.2 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare


Specific Phenotypes

For 2 genes in this experiment