Experiment set9S180 for Methanococcus maripaludis JJ

Compare to:

Formate 100 mM hypophosphite

200 most important genes:

  gene name fitness t score description  
MMJJ_RS02040 -6.0 -3.5 Asp-tRNA(Asn) amidotransferase subunit GatC compare
MMJJ_RS04200 -5.7 -6.8 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS08850 -4.7 -3.2 succinate dehydrogenase/fumarate reductase iron-sulfur subunit compare
MMJJ_RS04975 -4.3 -3.0 glycosyltransferase family 4 protein compare
MMJJ_RS05930 -4.3 -2.9 cell division protein SepF compare
MMJJ_RS05155 -4.2 -7.0 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMJJ_RS01935 -4.2 -5.7 O-phosphoseryl-tRNA(Sec) selenium transferase compare
MMJJ_RS06875 -4.1 -4.0 hypothetical protein compare
MMJJ_RS06600 -4.1 -3.9 DUF555 domain-containing protein compare
MMJJ_RS05610 -4.0 -3.9 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS01600 -4.0 -2.8 radical SAM protein compare
MMJJ_RS03065 -3.9 -14.9 CBS domain-containing protein compare
MMJJ_RS03820 -3.9 -4.6 hydrogenase formation protein HypD compare
MMJJ_RS03190 -3.6 -3.5 phosphopyruvate hydratase compare
MMJJ_RS02920 -3.6 -3.2 30S ribosomal protein S27ae compare
MMJJ_RS09375 -3.6 -2.5 hypothetical protein compare
MMJJ_RS08855 -3.6 -5.0 cyclic pyranopterin monophosphate synthase MoaC compare
MMJJ_RS06700 -3.6 -7.3 L-seryl-tRNA(Sec) kinase compare
MMJJ_RS03760 -3.5 -4.8 hydrogenase maturation nickel metallochaperone HypA compare
MMJJ_RS06490 -3.5 -4.1 methanogenesis marker 2 protein compare
MMJJ_RS08625 -3.4 -6.2 magnesium/cobalt transporter CorA compare
MMJJ_RS07660 -3.4 -11.5 carbonic anhydrase compare
MMJJ_RS07945 -3.4 -3.8 4Fe-4S binding protein compare
MMJJ_RS06940 -3.4 -11.4 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS03150 -3.4 -6.9 2-phospho-L-lactate transferase compare
MMJJ_RS01355 -3.4 -3.3 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS03055 -3.4 -3.7 hypothetical protein compare
MMJJ_RS01350 -3.3 -6.8 sodium:proton antiporter compare
MMJJ_RS08005 -3.3 -17.2 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMJJ_RS02200 -3.3 -10.1 chorismate pyruvate-lyase family protein compare
MMJJ_RS08585 -3.3 -9.7 M42 family metallopeptidase compare
MMJJ_RS02205 -3.3 -12.5 hypothetical protein compare
MMJJ_RS01810 -3.2 -2.0 methyl coenzyme M reductase system, component A2 compare
MMJJ_RS07670 -3.2 -16.7 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain compare
MMJJ_RS05540 -3.2 -18.6 LysR family transcriptional regulator compare
MMJJ_RS03140 -3.2 -11.3 tRNA-dihydrouridine synthase compare
MMJJ_RS01360 -3.2 -3.1 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS07665 -3.2 -20.7 formate dehydrogenase subunit alpha compare
MMJJ_RS04155 -3.2 -7.7 hypothetical protein compare
MMJJ_RS01870 -3.2 -2.2 methanogenesis marker 15 protein compare
MMJJ_RS04800 -3.2 -7.0 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS03875 -3.1 -4.7 CBS domain-containing protein compare
MMJJ_RS03620 -3.1 -7.1 DUF2097 domain-containing protein compare
MMJJ_RS05575 -3.1 -4.6 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS03840 -3.1 -5.1 DHH family phosphoesterase compare
MMJJ_RS05260 -3.1 -6.7 ATP-grasp domain-containing protein compare
MMJJ_RS00275 -3.0 -3.3 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS07950 -3.0 -3.6 4Fe-4S binding protein compare
MMJJ_RS02045 -3.0 -3.7 molybdenum cofactor guanylyltransferase compare
MMJJ_RS03160 -3.0 -11.3 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS02055 -3.0 -11.6 GTP 3',8-cyclase MoaA compare
MMJJ_RS07350 -3.0 -3.8 4Fe-4S binding protein compare
MMJJ_RS08820 -2.9 -7.8 pyridoxal phosphate-dependent aminotransferase compare
MMJJ_RS06865 -2.9 -4.6 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS08000 -2.9 -11.4 HesA/MoeB/ThiF family protein compare
MMJJ_RS00570 -2.9 -1.8 ribonuclease P compare
MMJJ_RS07415 -2.9 -3.2 polyprenyl diphosphate synthase compare
MMJJ_RS06725 -2.9 -11.7 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS03895 -2.9 -3.5 hydrogenase expression/formation protein HypE compare
MMJJ_RS07655 -2.8 -13.4 hypothetical protein compare
MMJJ_RS02190 -2.8 -14.7 molybdopterin biosynthesis protein compare
MMJJ_RS02090 -2.8 -5.1 tyramine--L-glutamate ligase compare
MMJJ_RS00415 -2.8 -8.4 DedA family protein compare
MMJJ_RS04995 -2.8 -6.5 Tfx family DNA-binding protein compare
MMJJ_RS06050 -2.8 -10.2 molybdopterin molybdotransferase MoeA compare
MMJJ_RS04485 -2.8 -8.6 riboflavin synthase compare
MMJJ_RS04150 -2.8 -3.7 DUF5379 domain-containing protein compare
MMJJ_RS03500 -2.8 -12.2 F420-dependent methylenetetrahydromethanopterin dehydrogenase compare
MMJJ_RS03615 -2.8 -3.8 cobalt-precorrin-8 methylmutase compare
MMJJ_RS06240 -2.7 -2.2 dihydropteroate synthase-like protein compare
MMJJ_RS01765 -2.7 -10.8 winged helix-turn-helix domain-containing protein compare
MMJJ_RS05620 -2.7 -4.9 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein compare
MMJJ_RS01200 -2.7 -3.2 PRC-barrel domain-containing protein compare
MMJJ_RS08055 -2.7 -7.5 methanogenesis marker 14 protein compare
MMJJ_RS05360 -2.7 -6.4 nickel-responsive transcriptional regulator NikR compare
MMJJ_RS06915 -2.6 -11.9 helix-turn-helix domain-containing protein compare
MMJJ_RS06860 -2.6 -3.2 hypothetical protein compare
MMJJ_RS08250 -2.6 -7.2 hydrogenase maturation peptidase HycI compare
MMJJ_RS04110 -2.5 -5.9 hypothetical protein compare
MMJJ_RS07410 -2.5 -3.9 methanogenesis marker protein Mmp4/MtxX compare
MMJJ_RS00550 -2.5 -8.6 AIR synthase-related protein compare
MMJJ_RS03005 -2.5 -3.8 Ni-sirohydrochlorin a,c-diamide reductive cyclase catalytic subunit compare
MMJJ_RS08320 -2.5 -2.6 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS08150 -2.5 -12.8 M24 family metallopeptidase compare
MMJJ_RS07725 -2.5 -5.5 DNA primase DnaG compare
MMJJ_RS06750 -2.5 -2.7 homoaconitase large subunit compare
MMJJ_RS03765 -2.5 -6.2 hypothetical protein compare
MMJJ_RS05560 -2.4 -5.3 30S ribosomal protein S27e compare
MMJJ_RS07995 -2.4 -6.0 molybdenum cofactor biosynthesis protein MoaE compare
MMJJ_RS00270 -2.4 -3.3 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS06625 -2.4 -2.8 pyruvate synthase subunit PorB compare
MMJJ_RS09175 -2.4 -1.6 anthranilate synthase component I compare
MMJJ_RS01405 -2.4 -1.6 proline--tRNA ligase compare
MMJJ_RS04685 -2.4 -8.0 carbamoyltransferase HypF compare
MMJJ_RS04655 -2.4 -6.4 FAD-dependent oxidoreductase compare
MMJJ_RS06575 -2.4 -4.8 prephenate dehydrogenase compare
MMJJ_RS00580 -2.4 -2.0 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG compare
MMJJ_RS05935 -2.4 -2.1 Era-like GTP-binding protein compare
MMJJ_RS05810 -2.3 -7.0 precorrin-4 C(11)-methyltransferase compare
MMJJ_RS04565 -2.3 -3.5 sirohydrochlorin nickelochelatase compare
MMJJ_RS00205 -2.3 -5.7 adenosylcobinamide-phosphate synthase CbiB compare
MMJJ_RS02195 -2.3 -10.2 AmmeMemoRadiSam system radical SAM enzyme compare
MMJJ_RS05250 -2.3 -9.3 HDIG domain-containing protein conserved
MMJJ_RS03155 -2.3 -8.8 hypothetical protein compare
MMJJ_RS04520 -2.3 -4.3 coenzyme F430 synthase compare
MMJJ_RS04505 -2.3 -6.2 CDC48 family AAA ATPase compare
MMJJ_RS00560 -2.2 -4.4 homoisocitrate dehydrogenase compare
MMJJ_RS04675 -2.2 -5.9 thiamine pyrophosphate-binding protein compare
MMJJ_RS04620 -2.2 -4.0 homocitrate synthase family protein compare
MMJJ_RS08155 -2.2 -4.1 cobalt-precorrin-5B (C(1))-methyltransferase CbiD compare
MMJJ_RS04790 -2.2 -3.9 biotin--[acetyl-CoA-carboxylase] ligase compare
MMJJ_RS05650 -2.2 -3.0 formylmethanofuran dehydrogenase subunit B compare
MMJJ_RS00265 -2.2 -6.9 TIGR02253 family HAD-type hydrolase compare
MMJJ_RS08080 -2.2 -7.5 TIGR00300 family protein compare
MMJJ_RS03205 -2.2 -8.3 metallophosphoesterase compare
MMJJ_RS07355 -2.2 -5.6 MoaD/ThiS family protein compare
MMJJ_RS07155 -2.2 -8.2 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMJJ_RS05655 -2.1 -5.6 HisA/HisF family protein compare
MMJJ_RS02935 -2.1 -3.8 DNA-directed RNA polymerase subunit E'' compare
MMJJ_RS06185 -2.1 -4.8 cobalamin biosynthesis protein compare
MMJJ_RS03670 -2.1 -4.3 precorrin-2 C(20)-methyltransferase compare
MMJJ_RS05150 -2.1 -12.0 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMJJ_RS01345 -2.1 -4.2 (5-formylfuran-3-yl)methyl phosphate synthase compare
MMJJ_RS09055 -2.1 -6.2 NFACT family protein compare
MMJJ_RS05765 -2.1 -1.4 flagellar protein E compare
MMJJ_RS08615 -2.1 -7.2 oligosaccharide repeat unit polymerase family protein compare
MMJJ_RS06695 -2.1 -2.5 amidohydrolase compare
MMJJ_RS03580 -2.0 -2.6 TIGR00303 family protein compare
MMJJ_RS03230 -2.0 -3.3 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS01750 -2.0 -2.7 ferrous iron transport protein A compare
MMJJ_RS06485 -2.0 -2.6 phosphoglycerate kinase compare
MMJJ_RS01415 -2.0 -2.5 beta-CASP ribonuclease aCPSF1 compare
MMJJ_RS00125 -2.0 -2.7 KEOPS complex subunit Cgi121 compare
MMJJ_RS02275 -2.0 -3.4 nucleotidyltransferase domain-containing protein compare
MMJJ_RS06255 -2.0 -5.6 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS04145 -2.0 -6.8 glutamate-1-semialdehyde 2,1-aminomutase compare
MMJJ_RS05370 -2.0 -8.2 LysR family transcriptional regulator compare
MMJJ_RS05950 -2.0 -3.5 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
MMJJ_RS06855 -2.0 -1.6 DUF2104 domain-containing protein compare
MMJJ_RS03830 -2.0 -11.2 CBS domain-containing protein compare
MMJJ_RS03815 -1.9 -1.8 nascent polypeptide-associated complex protein compare
MMJJ_RS05190 -1.9 -7.6 gamma carbonic anhydrase family protein compare
MMJJ_RS05995 -1.9 -3.0 ATP-binding cassette domain-containing protein compare
MMJJ_RS01820 -1.9 -3.8 MJ1244 family protein compare
MMJJ_RS06785 -1.9 -7.1 RNA ligase partner protein compare
MMJJ_RS07345 -1.9 -6.0 homocysteine biosynthesis protein compare
MMJJ_RS08925 -1.9 -9.9 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS01755 -1.9 -2.7 ferrous iron transport protein B compare
MMJJ_RS03125 -1.9 -4.0 GMC oxidoreductase compare
MMJJ_RS03650 -1.9 -4.9 class I SAM-dependent methyltransferase family protein compare
MMJJ_RS06180 -1.9 -2.8 tryptophan--tRNA ligase compare
MMJJ_RS01815 -1.8 -3.3 DUF134 domain-containing protein compare
MMJJ_RS01690 -1.8 -3.0 methanogenesis marker 12 protein compare
MMJJ_RS08430 -1.8 -5.7 small nuclear ribonucleoprotein compare
MMJJ_RS08020 -1.8 -6.8 nucleotidyltransferase domain-containing protein compare
MMJJ_RS06910 -1.8 -3.3 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS03865 -1.8 -1.9 phosphoribosyl-AMP cyclohydrolase compare
MMJJ_RS06155 -1.8 -4.1 phosphatidylglycerophosphatase A compare
MMJJ_RS08840 -1.8 -3.9 calcium/sodium antiporter compare
MMJJ_RS05720 -1.8 -2.4 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS08225 -1.7 -5.4 peptidylprolyl isomerase compare
MMJJ_RS06840 -1.7 -3.2 nickel-dependent hydrogenase large subunit compare
MMJJ_RS00215 -1.7 -1.8 CCA tRNA nucleotidyltransferase compare
MMJJ_RS04970 -1.7 -1.5 DUF655 domain-containing protein compare
MMJJ_RS08035 -1.7 -5.3 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMJJ_RS07405 -1.7 -5.0 histone family protein compare
MMJJ_RS01785 -1.7 -1.6 50S ribosomal protein L14e compare
MMJJ_RS07245 -1.7 -3.1 amidohydrolase family protein compare
MMJJ_RS05295 -1.7 -7.5 cobyrinic acid a,c-diamide synthase compare
MMJJ_RS07430 -1.7 -2.2 ribonuclease VapC compare
MMJJ_RS04980 -1.7 -3.7 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase compare
MMJJ_RS01960 -1.7 -5.3 glycosyltransferase family 2 protein compare
MMJJ_RS08795 -1.7 -2.1 phosphoglucosamine mutase compare
MMJJ_RS06170 -1.7 -7.9 hypothetical protein compare
MMJJ_RS08095 -1.6 -4.2 cobyric acid synthase CobQ compare
MMJJ_RS06290 -1.6 -8.5 DUF749 domain-containing protein compare
MMJJ_RS03170 -1.6 -5.5 DUF5612 domain-containing protein compare
MMJJ_RS04475 -1.6 -4.1 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
MMJJ_RS01875 -1.6 -3.8 global nitrogen regulator NrpR compare
MMJJ_RS06295 -1.6 -7.4 DUF2096 family protein compare
MMJJ_RS08340 -1.6 -3.5 archaeoflavoprotein AfpA compare
MMJJ_RS06805 -1.6 -3.2 monovalent cation/H+ antiporter subunit E compare
MMJJ_RS09030 -1.6 -8.8 hypothetical protein compare
MMJJ_RS07165 -1.6 -12.1 chromosome segregation protein SMC compare
MMJJ_RS05070 -1.6 -1.8 DNA primase catalytic subunit PriS compare
MMJJ_RS04700 -1.6 -4.2 deoxyhypusine synthase compare
MMJJ_RS08325 -1.6 -1.4 glycosyltransferase family 2 protein compare
MMJJ_RS05725 -1.6 -7.9 UPF0179 family protein compare
MMJJ_RS03810 -1.6 -1.6 AIR synthase-related protein compare
MMJJ_RS06945 -1.5 -9.4 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
MMJJ_RS05490 -1.5 -2.1 imidazole glycerol phosphate synthase subunit HisF compare
MMJJ_RS06675 -1.5 -10.5 TIGR01212 family radical SAM protein compare
MMJJ_RS01880 -1.5 -1.9 RlmE family RNA methyltransferase compare
MMJJ_RS08715 -1.5 -6.3 NAD-dependent epimerase/dehydratase family protein compare
MMJJ_RS04670 -1.5 -5.1 DUF2117 domain-containing protein compare
MMJJ_RS08725 -1.5 -9.2 flippase compare
MMJJ_RS08175 -1.5 -6.7 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS06040 -1.5 -3.0 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS05225 -1.5 -1.3 Gar1/Naf1 family protein compare
MMJJ_RS03845 -1.5 -3.1 translation initiation factor IF-2 compare


Specific Phenotypes

For 9 genes in this experiment

For stress Sodium hypophosphite in Methanococcus maripaludis JJ

For stress Sodium hypophosphite across organisms