Experiment set9S178 for Methanococcus maripaludis JJ

Compare to:

Formate 100 mM hypophosphite

200 most important genes:

  gene name fitness t score description  
MMJJ_RS08870 -2.7 -1.4 2-isopropylmalate synthase compare
MMJJ_RS01100 -2.2 -1.5 helix-turn-helix domain-containing protein compare
MMJJ_RS03065 -2.2 -4.4 CBS domain-containing protein compare
MMJJ_RS08520 -1.6 -2.2 peptidylprolyl isomerase compare
MMJJ_RS03115 -1.5 -2.5 sulfopyruvate decarboxylase subunit alpha compare
MMJJ_RS01820 -1.4 -1.3 MJ1244 family protein compare
MMJJ_RS06785 -1.3 -3.5 RNA ligase partner protein compare
MMJJ_RS05380 -1.3 -0.9 hypothetical protein compare
MMJJ_RS01810 -1.3 -0.9 methyl coenzyme M reductase system, component A2 compare
MMJJ_RS03140 -1.2 -3.7 tRNA-dihydrouridine synthase compare
MMJJ_RS09375 -1.2 -0.8 hypothetical protein compare
MMJJ_RS08935 -1.1 -0.7 TIGR00288 family NYN domain-containing protein compare
MMJJ_RS03585 -1.1 -0.7 methanogenesis marker 6 protein compare
MMJJ_RS08225 -1.0 -1.7 peptidylprolyl isomerase compare
MMJJ_RS08005 -1.0 -5.0 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMJJ_RS04050 -1.0 -0.7 dihydroneopterin aldolase family protein compare
MMJJ_RS07655 -1.0 -4.8 hypothetical protein compare
MMJJ_RS07670 -1.0 -5.6 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain compare
MMJJ_RS05250 -0.9 -2.8 HDIG domain-containing protein conserved
MMJJ_RS06020 -0.9 -1.5 hypothetical protein compare
MMJJ_RS05135 -0.9 -0.8 50S ribosomal protein L18Ae compare
MMJJ_RS07665 -0.9 -6.0 formate dehydrogenase subunit alpha compare
MMJJ_RS02195 -0.9 -4.2 AmmeMemoRadiSam system radical SAM enzyme compare
MMJJ_RS09295 -0.9 -0.6 hypothetical protein compare
MMJJ_RS03205 -0.9 -2.6 metallophosphoesterase compare
MMJJ_RS02035 -0.9 -2.0 4-hydroxy-tetrahydrodipicolinate synthase compare
MMJJ_RS02055 -0.9 -3.4 GTP 3',8-cyclase MoaA compare
MMJJ_RS01865 -0.9 -1.4 peptidyl-tRNA hydrolase Pth2 compare
MMJJ_RS06725 -0.9 -2.9 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS03155 -0.8 -2.1 hypothetical protein compare
MMJJ_RS08760 -0.8 -3.5 glycosyltransferase family 9 protein compare
MMJJ_RS07355 -0.8 -2.0 MoaD/ThiS family protein compare
MMJJ_RS03500 -0.8 -3.9 F420-dependent methylenetetrahydromethanopterin dehydrogenase compare
MMJJ_RS07985 -0.8 -2.1 hypothetical protein compare
MMJJ_RS04670 -0.8 -1.4 DUF2117 domain-containing protein compare
MMJJ_RS08035 -0.8 -1.8 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMJJ_RS03360 -0.8 -0.7 hypothetical protein compare
MMJJ_RS08785 -0.8 -1.8 D-sedoheptulose 7-phosphate isomerase compare
MMJJ_RS06940 -0.8 -2.8 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS05970 -0.8 -1.5 MJ0307 family thioredoxin compare
MMJJ_RS07490 -0.8 -1.0 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMJJ_RS04720 -0.7 -0.6 IMP dehydrogenase compare
MMJJ_RS06945 -0.7 -3.4 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
MMJJ_RS00415 -0.7 -1.2 DedA family protein compare
MMJJ_RS04875 -0.7 -0.6 tRNA-Lys compare
MMJJ_RS08020 -0.7 -2.3 nucleotidyltransferase domain-containing protein compare
MMJJ_RS02980 -0.7 -3.2 TatD family hydrolase compare
MMJJ_RS06040 -0.7 -0.7 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS05560 -0.7 -1.8 30S ribosomal protein S27e compare
MMJJ_RS04870 -0.7 -0.6 tRNA-Asp compare
MMJJ_RS03160 -0.7 -2.2 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS07660 -0.7 -2.4 carbonic anhydrase compare
MMJJ_RS04200 -0.7 -1.3 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS00265 -0.7 -1.4 TIGR02253 family HAD-type hydrolase compare
MMJJ_RS08175 -0.7 -2.4 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS07640 -0.7 -4.9 cache domain-containing protein compare
MMJJ_RS03755 -0.7 -2.3 hypothetical protein compare
MMJJ_RS07505 -0.7 -0.5 DNA-directed RNA polymerase subunit K compare
MMJJ_RS03410 -0.7 -1.3 hypothetical protein compare
MMJJ_RS06750 -0.7 -0.5 homoaconitase large subunit compare
MMJJ_RS05540 -0.7 -3.4 LysR family transcriptional regulator compare
MMJJ_RS07775 -0.7 -2.2 fluoride efflux transporter CrcB compare
MMJJ_RS01930 -0.7 -2.0 Pre-mRNA processing ribonucleoprotein compare
MMJJ_RS07590 -0.7 -2.8 flap endonuclease-1 compare
MMJJ_RS01065 -0.6 -2.6 DUF1700 domain-containing protein compare
MMJJ_RS06050 -0.6 -2.2 molybdopterin molybdotransferase MoeA compare
MMJJ_RS05655 -0.6 -0.9 HisA/HisF family protein compare
MMJJ_RS08135 -0.6 -1.3 30S ribosomal protein S6e compare
MMJJ_RS07915 -0.6 -1.9 CBS domain-containing protein compare
MMJJ_RS05150 -0.6 -3.1 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMJJ_RS08230 -0.6 -0.6 ribose-5-phosphate isomerase RpiA compare
MMJJ_RS04485 -0.6 -1.9 riboflavin synthase compare
MMJJ_RS08855 -0.6 -1.1 cyclic pyranopterin monophosphate synthase MoaC compare
MMJJ_RS00550 -0.6 -1.9 AIR synthase-related protein compare
MMJJ_RS05190 -0.6 -1.9 gamma carbonic anhydrase family protein compare
MMJJ_RS09175 -0.6 -0.4 anthranilate synthase component I compare
MMJJ_RS01055 -0.6 -1.4 hypothetical protein compare
MMJJ_RS02205 -0.6 -2.8 hypothetical protein compare
MMJJ_RS03895 -0.6 -0.6 hydrogenase expression/formation protein HypE compare
MMJJ_RS03540 -0.6 -1.5 TIGR00289 family protein compare
MMJJ_RS01150 -0.6 -1.2 hypothetical protein compare
MMJJ_RS02275 -0.6 -0.4 nucleotidyltransferase domain-containing protein compare
MMJJ_RS07810 -0.6 -2.8 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMJJ_RS08780 -0.6 -1.1 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
MMJJ_RS09010 -0.6 -1.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMJJ_RS00240 -0.5 -3.5 AI-2E family transporter conserved
MMJJ_RS05105 -0.5 -2.4 P-II family nitrogen regulator compare
MMJJ_RS03295 -0.5 -2.6 PHP domain-containing protein compare
MMJJ_RS07765 -0.5 -1.1 DMT family protein compare
MMJJ_RS08150 -0.5 -2.5 M24 family metallopeptidase compare
MMJJ_RS06290 -0.5 -1.9 DUF749 domain-containing protein compare
MMJJ_RS07635 -0.5 -2.4 response regulator transcription factor compare
MMJJ_RS08770 -0.5 -1.2 HAD family hydrolase compare
MMJJ_RS01275 -0.5 -1.4 4Fe-4S dicluster domain-containing protein compare
MMJJ_RS01115 -0.5 -1.5 hypothetical protein compare
MMJJ_RS01265 -0.5 -1.4 cupin domain-containing protein compare
MMJJ_RS06650 -0.5 -3.2 cell division protein FtsZ compare
MMJJ_RS09300 -0.5 -0.7 hypothetical protein compare
MMJJ_RS06860 -0.5 -0.8 hypothetical protein compare
MMJJ_RS01935 -0.5 -0.6 O-phosphoseryl-tRNA(Sec) selenium transferase compare
MMJJ_RS04110 -0.5 -1.2 hypothetical protein compare
MMJJ_RS06265 -0.5 -2.3 8-amino-7-oxononanoate synthase compare
MMJJ_RS05370 -0.5 -1.5 LysR family transcriptional regulator compare
MMJJ_RS06025 -0.5 -2.5 4Fe-4S binding protein compare
MMJJ_RS06010 -0.5 -1.1 hypothetical protein compare
MMJJ_RS07165 -0.5 -2.8 chromosome segregation protein SMC compare
MMJJ_RS06015 -0.5 -1.7 Na(+)/H(+) antiporter subunit B compare
MMJJ_RS08310 -0.5 -1.8 ZIP family metal transporter compare
MMJJ_RS06830 -0.5 -1.8 4Fe-4S binding protein compare
MMJJ_RS02860 -0.5 -0.7 site-specific integrase compare
MMJJ_RS06625 -0.5 -0.5 pyruvate synthase subunit PorB compare
MMJJ_RS08750 -0.5 -2.4 glycosyltransferase compare
MMJJ_RS02120 -0.5 -1.4 DJ-1/PfpI family protein compare
MMJJ_RS03035 -0.5 -2.0 nitroreductase family protein compare
MMJJ_RS01595 -0.5 -2.0 U32 family peptidase compare
MMJJ_RS02935 -0.4 -0.7 DNA-directed RNA polymerase subunit E'' compare
MMJJ_RS01765 -0.4 -1.4 winged helix-turn-helix domain-containing protein compare
MMJJ_RS08775 -0.4 -1.4 PfkB family carbohydrate kinase compare
MMJJ_RS00885 -0.4 -1.3 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS02665 -0.4 -0.8 methyl-accepting chemotaxis protein compare
MMJJ_RS02140 -0.4 -1.8 preflagellin peptidase FlaK compare
MMJJ_RS09255 -0.4 -1.0 hypothetical protein compare
MMJJ_RS04545 -0.4 -0.8 PadR family transcriptional regulator compare
MMJJ_RS08820 -0.4 -1.0 pyridoxal phosphate-dependent aminotransferase compare
MMJJ_RS06915 -0.4 -2.1 helix-turn-helix domain-containing protein compare
MMJJ_RS08920 -0.4 -2.5 CoB--CoM heterodisulfide reductase subunit B compare
MMJJ_RS04105 -0.4 -2.9 prepilin peptidase compare
MMJJ_RS04260 -0.4 -2.4 molybdopterin molybdotransferase MoeA compare
MMJJ_RS08915 -0.4 -1.3 CoB--CoM heterodisulfide reductase subunit C compare
MMJJ_RS08390 -0.4 -0.8 carboxymuconolactone decarboxylase family protein compare
MMJJ_RS03610 -0.4 -1.2 HIT family protein compare
MMJJ_RS05400 -0.4 -1.3 CoA-binding protein compare
MMJJ_RS04150 -0.4 -0.3 DUF5379 domain-containing protein compare
MMJJ_RS02345 -0.4 -2.0 ATP-binding protein compare
MMJJ_RS08715 -0.4 -0.7 NAD-dependent epimerase/dehydratase family protein compare
MMJJ_RS00900 -0.4 -1.2 PC4/YdbC family ssDNA-binding protein compare
MMJJ_RS03730 -0.4 -1.5 SWIM zinc finger family protein compare
MMJJ_RS00670 -0.4 -1.5 nitrogen fixation compare
MMJJ_RS05345 -0.4 -1.8 ATP-dependent Clp protease proteolytic subunit compare
MMJJ_RS03420 -0.4 -1.7 hypothetical protein compare
MMJJ_RS03765 -0.4 -0.8 hypothetical protein compare
MMJJ_RS03430 -0.4 -0.9 winged helix-turn-helix domain-containing protein compare
MMJJ_RS02190 -0.4 -2.1 molybdopterin biosynthesis protein compare
MMJJ_RS06275 -0.4 -1.4 hypothetical protein compare
MMJJ_RS07815 -0.4 -2.0 2-oxoacid:acceptor oxidoreductase family protein compare
MMJJ_RS03885 -0.4 -2.3 tetratricopeptide repeat protein compare
MMJJ_RS01470 -0.4 -0.7 Hsp20/alpha crystallin family protein compare
MMJJ_RS07040 -0.4 -0.5 preprotein translocase subunit SecY compare
MMJJ_RS01515 -0.4 -1.1 DUF2178 domain-containing protein compare
MMJJ_RS03440 -0.3 -1.7 hypothetical protein compare
MMJJ_RS07405 -0.3 -0.6 histone family protein compare
MMJJ_RS05090 -0.3 -0.9 MGMT family protein compare
MMJJ_RS05140 -0.3 -1.0 DUF2666 domain-containing protein compare
MMJJ_RS02920 -0.3 -0.2 30S ribosomal protein S27ae compare
MMJJ_RS07155 -0.3 -1.0 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMJJ_RS07375 -0.3 -0.9 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMJJ_RS05065 -0.3 -0.6 (4-{4-[2-(gamma-L- glutamylamino)ethyl]phenoxymethyl}furan-2-yl)methanamine synthase compare
MMJJ_RS03285 -0.3 -0.9 gamma-glutamylcyclotransferase compare
MMJJ_RS03630 -0.3 -1.7 AMP phosphorylase compare
MMJJ_RS08560 -0.3 -1.5 metal-dependent phosphohydrolase compare
MMJJ_RS09235 -0.3 -1.0 helix-turn-helix transcriptional regulator compare
MMJJ_RS04220 -0.3 -1.6 helix-turn-helix transcriptional regulator compare
MMJJ_RS01925 -0.3 -1.1 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMJJ_RS00440 -0.3 -1.4 selenide, water dikinase SelD compare
MMJJ_RS02200 -0.3 -0.7 chorismate pyruvate-lyase family protein compare
MMJJ_RS04515 -0.3 -2.2 HD domain-containing protein compare
MMJJ_RS02870 -0.3 -1.2 hypothetical protein compare
MMJJ_RS08910 -0.3 -1.6 DUF167 domain-containing protein compare
MMJJ_RS02180 -0.3 -1.2 DHH family phosphoesterase compare
MMJJ_RS07025 -0.3 -1.2 tRNA (cytidine(56)-2'-O)-methyltransferase compare
MMJJ_RS03800 -0.3 -1.4 aldolase compare
MMJJ_RS05820 -0.3 -0.6 DUF2304 domain-containing protein compare
MMJJ_RS08685 -0.3 -1.8 phosphate ABC transporter permease subunit PstC compare
MMJJ_RS00425 -0.3 -0.4 hypothetical protein compare
MMJJ_RS03850 -0.3 -1.2 nucleoside-diphosphate kinase compare
MMJJ_RS08495 -0.3 -1.8 FprA family A-type flavoprotein compare
MMJJ_RS01365 -0.3 -1.1 Mrp/NBP35 family ATP-binding protein compare
MMJJ_RS09225 -0.3 -1.3 hypothetical protein compare
MMJJ_RS08335 -0.3 -0.3 ABC transporter ATP-binding protein compare
MMJJ_RS04255 -0.3 -1.9 permease compare
MMJJ_RS04970 -0.3 -0.2 DUF655 domain-containing protein compare
MMJJ_RS02010 -0.3 -1.4 MBL fold metallo-hydrolase compare
MMJJ_RS03830 -0.3 -1.2 CBS domain-containing protein compare
MMJJ_RS00505 -0.3 -1.5 3'-5' exonuclease compare
MMJJ_RS05495 -0.3 -1.5 MinD/ParA family protein compare
MMJJ_RS08630 -0.3 -1.1 signal recognition particle subunit SRP19/SEC65 family protein compare
MMJJ_RS00995 -0.3 -1.3 TetR/AcrR family transcriptional regulator compare
MMJJ_RS04440 -0.3 -1.1 hypothetical protein compare
MMJJ_RS00630 -0.3 -1.3 betaine/proline/choline family ABC transporter ATP-binding protein compare
MMJJ_RS06715 -0.3 -1.3 lactaldehyde dehydrogenase compare
MMJJ_RS01210 -0.3 -0.5 hypothetical protein compare
MMJJ_RS04685 -0.3 -0.7 carbamoyltransferase HypF compare
MMJJ_RS08830 -0.3 -0.7 hypothetical protein compare
MMJJ_RS07280 -0.3 -1.1 phosphomannomutase/phosphoglucomutase compare
MMJJ_RS00745 -0.3 -0.6 hypothetical protein compare
MMJJ_RS08265 -0.3 -1.4 iron ABC transporter permease compare
MMJJ_RS05375 -0.3 -1.6 radical SAM protein compare
MMJJ_RS05155 -0.3 -0.5 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMJJ_RS05010 -0.3 -1.6 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain compare
MMJJ_RS03170 -0.3 -0.8 DUF5612 domain-containing protein compare


Specific Phenotypes

For 5 genes in this experiment

For stress Sodium hypophosphite in Methanococcus maripaludis JJ

For stress Sodium hypophosphite across organisms