Experiment set9IT091 for Ralstonia sp. UNC404CL21Col

Compare to:

Lauric acid carbon source

200 most important genes:

  gene name fitness t score description  
ABZR87_RS00285 -4.5 -3.1 acetylornithine transaminase compare
ABZR87_RS14535 -4.4 -8.5 3-isopropylmalate dehydratase small subunit compare
ABZR87_RS05170 -4.1 -5.6 acetylglutamate kinase compare
ABZR87_RS06770 -4.0 -9.8 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
ABZR87_RS07380 -3.9 -17.5 FAD/FMN-binding oxidoreductase compare
ABZR87_RS16170 -3.8 -8.0 argininosuccinate lyase compare
ABZR87_RS09450 -3.8 -10.6 prephenate dehydratase compare
ABZR87_RS02570 -3.8 -26.4 glutamate synthase-related protein compare
ABZR87_RS02595 -3.7 -11.9 shikimate kinase compare
ABZR87_RS07360 -3.7 -17.2 threonine ammonia-lyase, biosynthetic compare
ABZR87_RS22970 -3.7 -13.4 cystathionine gamma-synthase family protein compare
ABZR87_RS14955 -3.7 -9.9 acetolactate synthase 3 catalytic subunit compare
ABZR87_RS09465 -3.7 -10.4 3-phosphoshikimate 1-carboxyvinyltransferase compare
ABZR87_RS13790 -3.7 -12.5 chorismate synthase compare
ABZR87_RS23475 -3.6 -9.4 malonate decarboxylase subunit epsilon compare
ABZR87_RS14500 -3.6 -18.7 tryptophan synthase subunit beta compare
ABZR87_RS00185 -3.5 -5.7 uroporphyrinogen-III C-methyltransferase compare
ABZR87_RS13250 -3.5 -4.9 phosphoserine phosphatase SerB compare
ABZR87_RS02140 -3.5 -18.7 anthranilate synthase component I compare
ABZR87_RS00835 -3.5 -9.8 argininosuccinate synthase compare
ABZR87_RS02590 -3.4 -11.8 3-dehydroquinate synthase compare
ABZR87_RS14540 -3.4 -10.3 3-isopropylmalate dehydratase large subunit compare
ABZR87_RS05590 -3.4 -3.3 orotate phosphoribosyltransferase compare
ABZR87_RS14950 -3.3 -6.0 acetolactate synthase small subunit compare
ABZR87_RS02160 -3.3 -9.2 indole-3-glycerol phosphate synthase TrpC compare
ABZR87_RS00200 -3.3 -6.2 phosphoadenylyl-sulfate reductase compare
ABZR87_RS09445 -3.3 -13.9 3-phosphoserine/phosphohydroxythreonine transaminase compare
ABZR87_RS05200 -3.3 -16.5 homoserine O-acetyltransferase compare
ABZR87_RS02640 -3.3 -14.9 diaminopimelate decarboxylase compare
ABZR87_RS11440 -3.2 -8.3 pyridoxal phosphate-dependent aminotransferase compare
ABZR87_RS20875 -3.2 -8.3 LysR family transcriptional regulator compare
ABZR87_RS02145 -3.2 -3.6 aminodeoxychorismate/anthranilate synthase component II compare
ABZR87_RS02565 -3.2 -8.0 glutamate synthase subunit beta compare
ABZR87_RS02155 -3.1 -9.6 anthranilate phosphoribosyltransferase compare
ABZR87_RS14530 -3.1 -11.5 3-isopropylmalate dehydrogenase compare
ABZR87_RS00210 -3.1 -12.1 nitrite/sulfite reductase compare
ABZR87_RS00205 -3.0 -4.0 DUF934 domain-containing protein compare
ABZR87_RS20880 -3.0 -10.2 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase compare
ABZR87_RS01810 -3.0 -3.7 glutamate 5-kinase compare
ABZR87_RS11625 -2.9 -10.3 malate synthase A compare
ABZR87_RS00190 -2.9 -14.2 sulfate adenylyltransferase subunit 1 compare
ABZR87_RS05100 -2.8 -6.4 RNA polymerase-binding protein DksA compare
ABZR87_RS09935 -2.8 -6.8 amino acid aminotransferase compare
ABZR87_RS14490 -2.8 -11.1 tryptophan synthase subunit alpha compare
ABZR87_RS00325 -2.7 -3.6 peptidylprolyl isomerase compare
ABZR87_RS01110 -2.7 -8.5 3-deoxy-7-phosphoheptulonate synthase AroG compare
ABZR87_RS07955 -2.7 -14.4 sensor histidine kinase compare
ABZR87_RS04865 -2.7 -7.0 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABZR87_RS13415 -2.6 -10.0 IclR family transcriptional regulator compare
ABZR87_RS07700 -2.6 -3.0 peptidylprolyl isomerase compare
ABZR87_RS08630 -2.6 -10.4 dihydroorotase compare
ABZR87_RS01675 -2.6 -3.4 carbohydrate kinase family protein compare
ABZR87_RS23470 -2.4 -2.3 malonate decarboxylase holo-ACP synthase compare
ABZR87_RS14360 -2.4 -9.7 acetate--CoA ligase compare
ABZR87_RS00220 -2.4 -9.6 CysB family HTH-type transcriptional regulator compare
ABZR87_RS07960 -2.4 -13.9 response regulator transcription factor compare
ABZR87_RS01645 -2.4 -6.6 type II 3-dehydroquinate dehydratase compare
ABZR87_RS14505 -2.3 -4.0 phosphoribosylanthranilate isomerase compare
ABZR87_RS10400 -2.2 -4.9 hypothetical protein compare
ABZR87_RS02480 -2.1 -3.7 imidazole glycerol phosphate synthase subunit HisH compare
ABZR87_RS08625 -2.1 -3.2 aspartate carbamoyltransferase catalytic subunit compare
ABZR87_RS12790 -2.1 -6.3 ATP-dependent Clp protease ATP-binding subunit ClpX compare
ABZR87_RS00195 -2.1 -4.4 sulfate adenylyltransferase subunit CysD compare
ABZR87_RS21940 -2.1 -1.4 hypothetical protein compare
ABZR87_RS05140 -2.1 -4.0 ATP-binding protein compare
ABZR87_RS11125 -2.1 -8.1 cell division protein ZapE compare
ABZR87_RS23450 -2.0 -5.5 biotin-independent malonate decarboxylase subunit beta compare
ABZR87_RS16180 -1.9 -5.6 arginine/lysine/ornithine decarboxylase compare
ABZR87_RS15505 -1.8 -1.7 DNA polymerase III subunit alpha compare
ABZR87_RS00215 -1.7 -6.1 sulfite exporter TauE/SafE family protein compare
ABZR87_RS11010 -1.7 -2.8 oxidative damage protection protein compare
ABZR87_RS00355 -1.7 -8.5 quinolinate synthase NadA compare
ABZR87_RS09895 -1.7 -2.3 DUF1841 family protein compare
ABZR87_RS10610 -1.7 -1.8 inositol monophosphatase family protein compare
ABZR87_RS01760 -1.7 -1.6 PP0621 family protein compare
ABZR87_RS08695 -1.6 -9.0 capsular polysaccharide biosynthesis protein CapF compare
ABZR87_RS12965 -1.6 -3.1 tail protein X compare
ABZR87_RS23445 -1.5 -3.1 malonate decarboxylase subunit delta compare
ABZR87_RS06395 -1.5 -4.2 response regulator compare
ABZR87_RS15440 -1.5 -4.2 ribonuclease G compare
ABZR87_RS16185 -1.5 -2.3 dCTP deaminase compare
ABZR87_RS08655 -1.5 -4.8 glucose-1-phosphate thymidylyltransferase RfbA compare
ABZR87_RS09710 -1.5 -4.5 tRNA-Arg compare
ABZR87_RS00350 -1.5 -6.1 carboxylating nicotinate-nucleotide diphosphorylase compare
ABZR87_RS07620 -1.4 -4.9 Holliday junction branch migration DNA helicase RuvB compare
ABZR87_RS14375 -1.4 -4.2 fumarate hydratase compare
ABZR87_RS01605 -1.4 -7.1 shikimate dehydrogenase compare
ABZR87_RS12785 -1.4 -4.9 endopeptidase La compare
ABZR87_RS09460 -1.4 -5.3 prephenate dehydrogenase compare
ABZR87_RS15705 -1.4 -3.6 UvrD-helicase domain-containing protein compare
ABZR87_RS09515 -1.4 -1.2 cysteine synthase CysM compare
ABZR87_RS08700 -1.4 -5.2 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
ABZR87_RS13475 -1.4 -6.3 PAS domain S-box protein compare
ABZR87_RS02575 -1.4 -4.8 transposase compare
ABZR87_RS23435 -1.3 -8.1 malonate decarboxylase subunit alpha compare
ABZR87_RS16250 -1.3 -4.4 iron-sulfur cluster carrier protein ApbC compare
ABZR87_RS14495 -1.3 -3.6 site-specific DNA-methyltransferase compare
ABZR87_RS23465 -1.3 -6.3 malonate transporter subunit MadM compare
ABZR87_RS04995 -1.3 -2.8 DNA topoisomerase III compare
ABZR87_RS13300 -1.3 -6.6 class I poly(R)-hydroxyalkanoic acid synthase compare
ABZR87_RS10820 -1.3 -6.1 LysR substrate-binding domain-containing protein compare
ABZR87_RS16660 -1.3 -3.7 helix-turn-helix domain-containing protein compare
ABZR87_RS12795 -1.3 -5.0 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
ABZR87_RS04105 -1.2 -4.0 ATP synthase subunit I compare
ABZR87_RS07730 -1.2 -2.1 lysophospholipid acyltransferase family protein compare
ABZR87_RS05060 -1.2 -4.1 DUF484 family protein compare
ABZR87_RS06845 -1.2 -6.7 heme o synthase compare
ABZR87_RS10780 -1.2 -3.6 PD-(D/E)XK nuclease family protein compare
ABZR87_RS12345 -1.2 -1.2 dethiobiotin synthase compare
ABZR87_RS10240 -1.1 -2.0 elongation factor P maturation arginine rhamnosyltransferase EarP compare
ABZR87_RS23180 -1.1 -2.0 ABC transporter ATP-binding protein compare
ABZR87_RS08795 -1.1 -3.1 undecaprenyl-diphosphate phosphatase compare
ABZR87_RS06645 -1.1 -1.3 TlpA disulfide reductase family protein compare
ABZR87_RS11815 -1.1 -6.9 [protein-PII] uridylyltransferase compare
ABZR87_RS00345 -1.1 -8.0 L-aspartate oxidase compare
ABZR87_RS07050 -1.1 -1.3 PTS IIA-like nitrogen regulatory protein PtsN compare
ABZR87_RS11245 -1.1 -4.5 translational GTPase TypA compare
ABZR87_RS11980 -1.0 -1.1 cold-shock protein compare
ABZR87_RS14330 -1.0 -1.0 hypothetical protein compare
ABZR87_RS17440 -1.0 -1.4 (2Fe-2S)-binding protein compare
ABZR87_RS11525 -1.0 -1.5 molybdopterin-binding protein compare
ABZR87_RS07635 -1.0 -2.6 crossover junction endodeoxyribonuclease RuvC compare
ABZR87_RS00360 -1.0 -1.5 acyl-CoA desaturase compare
ABZR87_RS20690 -1.0 -1.6 recombinase-like helix-turn-helix domain-containing protein compare
ABZR87_RS23430 -1.0 -5.4 LysR substrate-binding domain-containing protein compare
ABZR87_RS05350 -1.0 -3.7 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
ABZR87_RS06745 -1.0 -4.1 S41 family peptidase compare
ABZR87_RS10620 -1.0 -2.4 serine O-acetyltransferase compare
ABZR87_RS10085 -1.0 -1.1 Rne/Rng family ribonuclease compare
ABZR87_RS07705 -1.0 -3.3 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
ABZR87_RS01565 -1.0 -5.8 NADP-dependent malic enzyme compare
ABZR87_RS11065 -1.0 -5.3 nitrogen regulation protein NR(II) compare
ABZR87_RS16125 -1.0 -3.9 heme biosynthesis protein HemY compare
ABZR87_RS11755 -0.9 -1.5 arsenate reductase compare
ABZR87_RS10120 -0.9 -2.1 YceD family protein compare
ABZR87_RS01615 -0.9 -2.1 RNB domain-containing ribonuclease compare
ABZR87_RS13645 -0.9 -0.9 hypothetical protein compare
ABZR87_RS00875 -0.9 -3.6 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
ABZR87_RS08645 -0.9 -0.7 dTDP-glucose 4,6-dehydratase compare
ABZR87_RS04975 -0.9 -2.3 peptide deformylase compare
ABZR87_RS07470 -0.9 -5.0 TetR/AcrR family transcriptional regulator compare
ABZR87_RS00830 -0.9 -2.2 pyrimidine/purine nucleoside phosphorylase compare
ABZR87_RS19050 -0.9 -3.4 glycosyltransferase family 39 protein compare
ABZR87_RS22340 -0.9 -1.8 hypothetical protein compare
ABZR87_RS21925 -0.9 -1.6 hypothetical protein compare
ABZR87_RS00435 -0.9 -4.9 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABZR87_RS12960 -0.9 -1.0 head completion/stabilization protein compare
ABZR87_RS06705 -0.8 -6.2 glutamate--cysteine ligase compare
ABZR87_RS07950 -0.8 -5.3 sodium/substrate symporter small subunit compare
ABZR87_RS13175 -0.8 -1.3 tRNA-Leu compare
ABZR87_RS05580 -0.8 -2.7 diaminopimelate epimerase compare
ABZR87_RS08660 -0.8 -4.7 dTDP-4-dehydrorhamnose 3,5-epimerase compare
ABZR87_RS10930 -0.8 -2.0 outer membrane protein assembly factor BamB compare
ABZR87_RS23460 -0.8 -3.7 malonate transporter subunit MadL compare
ABZR87_RS05205 -0.8 -3.0 methionine biosynthesis protein MetW compare
ABZR87_RS23295 -0.8 -0.8 hypothetical protein compare
ABZR87_RS22325 -0.8 -1.9 H-NS histone family protein compare
ABZR87_RS08980 -0.8 -2.4 cell envelope integrity protein TolA compare
ABZR87_RS02325 -0.8 -2.4 cytochrome o ubiquinol oxidase subunit III compare
ABZR87_RS08585 -0.8 -1.9 chemotaxis protein CheW compare
ABZR87_RS04785 -0.8 -4.0 phosphomethylpyrimidine synthase ThiC compare
ABZR87_RS00845 -0.8 -2.3 DUF3579 domain-containing protein compare
ABZR87_RS10565 -0.8 -3.1 cupin domain-containing protein compare
ABZR87_RS10175 -0.8 -2.8 MucB/RseB C-terminal domain-containing protein compare
ABZR87_RS00795 -0.7 -2.7 site-specific tyrosine recombinase XerD compare
ABZR87_RS04640 -0.7 -2.1 hypothetical protein compare
ABZR87_RS01145 -0.7 -2.0 glycolate oxidase subunit GlcE compare
ABZR87_RS19345 -0.7 -3.2 glutaminase compare
ABZR87_RS07625 -0.7 -1.8 Holliday junction branch migration protein RuvA compare
ABZR87_RS12665 -0.7 -1.7 ABC transporter ATP-binding protein compare
ABZR87_RS06315 -0.7 -5.6 bifunctional isocitrate dehydrogenase kinase/phosphatase compare
ABZR87_RS01980 -0.7 -2.2 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
ABZR87_RS17310 -0.7 -3.5 PadR family transcriptional regulator compare
ABZR87_RS11015 -0.7 -3.7 amino-acid N-acetyltransferase compare
ABZR87_RS10550 -0.7 -0.4 outer membrane protein assembly factor BamC compare
ABZR87_RS01780 -0.7 -1.3 MarC family protein compare
ABZR87_RS07040 -0.7 -2.2 PsiF family protein compare
ABZR87_RS10170 -0.7 -2.4 RseA family anti-sigma factor compare
ABZR87_RS14115 -0.7 -1.6 ATP-dependent zinc metalloprotease FtsH compare
ABZR87_RS11265 -0.7 -1.4 amino acid ABC transporter ATP-binding protein compare
ABZR87_RS08330 -0.7 -5.3 isocitrate lyase compare
ABZR87_RS07665 -0.7 -4.2 aminopeptidase P N-terminal domain-containing protein compare
ABZR87_RS22405 -0.7 -0.9 hypothetical protein compare
ABZR87_RS11650 -0.7 -2.3 ribosomal protein S18-alanine N-acetyltransferase compare
ABZR87_RS23095 -0.7 -1.0 MarR family transcriptional regulator compare
ABZR87_RS21365 -0.7 -1.2 ligase-associated DNA damage response endonuclease PdeM compare
ABZR87_RS23455 -0.7 -2.7 biotin-independent malonate decarboxylase subunit gamma compare
ABZR87_RS08670 -0.7 -4.5 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
ABZR87_RS07435 -0.7 -1.7 DUF502 domain-containing protein compare
ABZR87_RS12975 -0.7 -2.4 phage holin family protein compare
ABZR87_RS01280 -0.7 -2.7 tRNA guanosine(34) transglycosylase Tgt compare
ABZR87_RS16960 -0.7 -2.3 HAMP domain-containing sensor histidine kinase compare
ABZR87_RS01555 -0.7 -0.6 barstar family protein compare
ABZR87_RS11770 -0.7 -4.1 succinyldiaminopimelate transaminase compare
ABZR87_RS11435 -0.6 -2.0 Mth938-like domain-containing protein compare
ABZR87_RS21245 -0.6 -0.9 1,2-phenylacetyl-CoA epoxidase subunit PaaD compare
ABZR87_RS15405 -0.6 -1.9 YebC/PmpR family DNA-binding transcriptional regulator compare
ABZR87_RS18440 -0.6 -1.3 VOC family protein compare
ABZR87_RS18560 -0.6 -1.4 NmrA family NAD(P)-binding protein compare
ABZR87_RS15450 -0.6 -1.6 2-dehydropantoate 2-reductase compare


Specific Phenotypes

For 5 genes in this experiment

For carbon source Lauric acid in Ralstonia sp. UNC404CL21Col

For carbon source Lauric acid across organisms