Experiment set9IT090 for Ralstonia sp. UNC404CL21Col

Compare to:

Lauric acid carbon source

200 most important genes:

  gene name fitness t score description  
ABZR87_RS09505 -6.8 -6.7 ADP-glyceromanno-heptose 6-epimerase compare
ABZR87_RS14950 -6.6 -4.5 acetolactate synthase small subunit compare
ABZR87_RS02570 -6.5 -9.9 glutamate synthase-related protein compare
ABZR87_RS13250 -6.4 -4.4 phosphoserine phosphatase SerB compare
ABZR87_RS11625 -6.4 -9.8 malate synthase A compare
ABZR87_RS14540 -6.4 -4.4 3-isopropylmalate dehydratase large subunit compare
ABZR87_RS20875 -6.4 -6.2 LysR family transcriptional regulator compare
ABZR87_RS07360 -6.4 -11.5 threonine ammonia-lyase, biosynthetic compare
ABZR87_RS02160 -6.3 -4.4 indole-3-glycerol phosphate synthase TrpC compare
ABZR87_RS14505 -6.3 -4.4 phosphoribosylanthranilate isomerase compare
ABZR87_RS10700 -6.3 -8.7 C40 family peptidase compare
ABZR87_RS02655 -6.3 -9.6 anti-sigma factor compare
ABZR87_RS00190 -6.2 -6.1 sulfate adenylyltransferase subunit 1 compare
ABZR87_RS09450 -6.2 -6.1 prephenate dehydratase compare
ABZR87_RS14535 -6.2 -6.0 3-isopropylmalate dehydratase small subunit compare
ABZR87_RS07735 -6.2 -4.3 D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase compare
ABZR87_RS10820 -6.2 -7.4 LysR substrate-binding domain-containing protein compare
ABZR87_RS00765 -6.2 -4.3 N-acetylmuramoyl-L-alanine amidase compare
ABZR87_RS01110 -6.2 -6.0 3-deoxy-7-phosphoheptulonate synthase AroG compare
ABZR87_RS09500 -6.1 -4.2 D-glycero-beta-D-manno-heptose-7-phosphate kinase compare
ABZR87_RS04785 -6.1 -11.6 phosphomethylpyrimidine synthase ThiC compare
ABZR87_RS03075 -6.0 -12.2 AGE family epimerase/isomerase compare
ABZR87_RS08630 -6.0 -5.8 dihydroorotase compare
ABZR87_RS05200 -6.0 -17.2 homoserine O-acetyltransferase compare
ABZR87_RS14500 -5.9 -13.2 tryptophan synthase subunit beta compare
ABZR87_RS00210 -5.9 -4.1 nitrite/sulfite reductase compare
ABZR87_RS08750 -5.9 -5.7 lipopolysaccharide heptosyltransferase I compare
ABZR87_RS16270 -5.9 -2.3 cold-shock protein compare
ABZR87_RS02155 -5.9 -8.0 anthranilate phosphoribosyltransferase compare
ABZR87_RS02640 -5.8 -16.9 diaminopimelate decarboxylase compare
ABZR87_RS05315 -5.8 -20.2 efflux RND transporter permease subunit compare
ABZR87_RS16125 -5.8 -5.6 heme biosynthesis protein HemY compare
ABZR87_RS09465 -5.7 -4.0 3-phosphoshikimate 1-carboxyvinyltransferase compare
ABZR87_RS05310 -5.7 -14.8 efflux RND transporter periplasmic adaptor subunit compare
ABZR87_RS16660 -5.7 -6.8 helix-turn-helix domain-containing protein compare
ABZR87_RS06770 -5.7 -5.6 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
ABZR87_RS13790 -5.7 -6.8 chorismate synthase compare
ABZR87_RS02115 -5.7 -6.8 murein transglycosylase A compare
ABZR87_RS10120 -5.6 -3.6 YceD family protein compare
ABZR87_RS02545 -5.6 -3.8 outer membrane lipid asymmetry maintenance protein MlaD compare
ABZR87_RS00205 -5.5 -6.0 DUF934 domain-containing protein compare
ABZR87_RS22970 -5.5 -13.8 cystathionine gamma-synthase family protein compare
ABZR87_RS16170 -5.5 -3.8 argininosuccinate lyase compare
ABZR87_RS02535 -5.5 -3.8 phospholipid-binding protein MlaC compare
ABZR87_RS13420 -5.5 -10.5 D-alanyl-D-alanine endopeptidase compare
ABZR87_RS10870 -5.5 -7.5 peptidoglycan DD-metalloendopeptidase family protein compare
ABZR87_RS01810 -5.5 -3.8 glutamate 5-kinase compare
ABZR87_RS17650 -5.4 -9.8 TetR/AcrR family transcriptional regulator compare
ABZR87_RS14530 -5.4 -8.3 3-isopropylmalate dehydrogenase compare
ABZR87_RS08040 -5.4 -10.9 lipopolysaccharide heptosyltransferase II compare
ABZR87_RS02595 -5.4 -12.5 shikimate kinase compare
ABZR87_RS02555 -5.3 -5.2 ABC transporter ATP-binding protein compare
ABZR87_RS05000 -5.3 -18.2 LysR family transcriptional regulator compare
ABZR87_RS20880 -5.3 -8.9 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase compare
ABZR87_RS02140 -5.3 -20.0 anthranilate synthase component I compare
ABZR87_RS14115 -5.3 -3.6 ATP-dependent zinc metalloprotease FtsH compare
ABZR87_RS09445 -5.3 -13.9 3-phosphoserine/phosphohydroxythreonine transaminase compare
ABZR87_RS00355 -5.2 -15.0 quinolinate synthase NadA compare
ABZR87_RS02550 -5.2 -3.6 lipid asymmetry maintenance ABC transporter permease subunit MlaE compare
ABZR87_RS11195 -5.1 -12.8 pseudouridine synthase compare
ABZR87_RS02145 -5.1 -3.5 aminodeoxychorismate/anthranilate synthase component II compare
ABZR87_RS02565 -5.1 -7.0 glutamate synthase subunit beta compare
ABZR87_RS19010 -5.0 -3.4 acyloxyacyl hydrolase compare
ABZR87_RS11440 -5.0 -9.0 pyridoxal phosphate-dependent aminotransferase compare
ABZR87_RS05320 -5.0 -16.8 efflux transporter outer membrane subunit compare
ABZR87_RS02020 -5.0 -15.9 long-chain fatty acid--CoA ligase compare
ABZR87_RS02590 -4.9 -10.5 3-dehydroquinate synthase compare
ABZR87_RS00435 -4.9 -4.8 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABZR87_RS00220 -4.8 -14.0 CysB family HTH-type transcriptional regulator compare
ABZR87_RS07380 -4.8 -10.7 FAD/FMN-binding oxidoreductase compare
ABZR87_RS02540 -4.8 -4.7 VacJ family lipoprotein compare
ABZR87_RS23305 -4.8 -10.6 PepSY-associated TM helix domain-containing protein compare
ABZR87_RS00195 -4.7 -5.0 sulfate adenylyltransferase subunit CysD compare
ABZR87_RS00835 -4.7 -4.6 argininosuccinate synthase compare
ABZR87_RS13415 -4.7 -3.3 IclR family transcriptional regulator compare
ABZR87_RS02445 -4.7 -6.4 Sec-independent protein translocase protein TatB compare
ABZR87_RS05100 -4.7 -7.7 RNA polymerase-binding protein DksA compare
ABZR87_RS02440 -4.6 -8.8 twin-arginine translocase subunit TatC compare
ABZR87_RS00200 -4.6 -5.6 phosphoadenylyl-sulfate reductase compare
ABZR87_RS00875 -4.6 -5.4 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
ABZR87_RS14965 -4.6 -3.1 DUF3619 family protein compare
ABZR87_RS05170 -4.5 -3.1 acetylglutamate kinase compare
ABZR87_RS00285 -4.5 -3.1 acetylornithine transaminase compare
ABZR87_RS09555 -4.4 -13.4 acyl-CoA dehydrogenase compare
ABZR87_RS00345 -4.4 -19.0 L-aspartate oxidase compare
ABZR87_RS04865 -4.4 -3.0 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABZR87_RS00185 -4.4 -4.2 uroporphyrinogen-III C-methyltransferase compare
ABZR87_RS14380 -4.4 -5.8 glutamate racemase compare
ABZR87_RS14955 -4.3 -5.9 acetolactate synthase 3 catalytic subunit compare
ABZR87_RS09935 -4.3 -4.2 amino acid aminotransferase compare
ABZR87_RS14490 -4.2 -12.5 tryptophan synthase subunit alpha compare
ABZR87_RS16055 -4.2 -9.1 outer membrane lipoprotein chaperone LolA compare
ABZR87_RS01615 -4.2 -1.8 RNB domain-containing ribonuclease compare
ABZR87_RS04975 -4.1 -4.8 peptide deformylase compare
ABZR87_RS10565 -4.1 -3.9 cupin domain-containing protein compare
ABZR87_RS16180 -4.0 -6.7 arginine/lysine/ornithine decarboxylase compare
ABZR87_RS21795 -4.0 -6.7 NUDIX domain-containing protein compare
ABZR87_RS02225 -4.0 -15.1 ATP-binding protein compare
ABZR87_RS11245 -4.0 -8.3 translational GTPase TypA compare
ABZR87_RS05350 -3.9 -7.9 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
ABZR87_RS04995 -3.9 -2.7 DNA topoisomerase III compare
ABZR87_RS13300 -3.9 -10.8 class I poly(R)-hydroxyalkanoic acid synthase compare
ABZR87_RS00350 -3.9 -5.3 carboxylating nicotinate-nucleotide diphosphorylase compare
ABZR87_RS12840 -3.9 -13.7 TonB-dependent siderophore receptor compare
ABZR87_RS07005 -3.8 -3.7 lipoprotein insertase outer membrane protein LolB compare
ABZR87_RS01645 -3.8 -6.3 type II 3-dehydroquinate dehydratase compare
ABZR87_RS09710 -3.7 -5.4 tRNA-Arg compare
ABZR87_RS13290 -3.7 -5.3 3-ketoacyl-ACP reductase compare
ABZR87_RS05590 -3.7 -2.5 orotate phosphoribosyltransferase compare
ABZR87_RS06385 -3.6 -12.4 CHASE3 domain-containing protein compare
ABZR87_RS08625 -3.6 -2.5 aspartate carbamoyltransferase catalytic subunit compare
ABZR87_RS06400 -3.6 -10.6 response regulator transcription factor compare
ABZR87_RS11790 -3.5 -5.0 cell division protein ZipA C-terminal FtsZ-binding domain-containing protein compare
ABZR87_RS12845 -3.5 -8.6 sigma-70 family RNA polymerase sigma factor compare
ABZR87_RS15440 -3.5 -4.1 ribonuclease G compare
ABZR87_RS10240 -3.5 -2.4 elongation factor P maturation arginine rhamnosyltransferase EarP compare
ABZR87_RS05010 -3.5 -4.1 rod shape-determining protein RodA compare
ABZR87_RS02235 -3.5 -7.5 response regulator compare
ABZR87_RS05025 -3.4 -2.3 rod shape-determining protein MreC compare
ABZR87_RS04125 -3.4 -9.9 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
ABZR87_RS09945 -3.4 -12.2 recombinase compare
ABZR87_RS10800 -3.3 -5.4 YbaB/EbfC family nucleoid-associated protein compare
ABZR87_RS23295 -3.2 -1.7 hypothetical protein compare
ABZR87_RS01675 -3.2 -2.2 carbohydrate kinase family protein compare
ABZR87_RS07475 -3.2 -17.0 acyl-CoA dehydrogenase C-terminal domain-containing protein compare
ABZR87_RS07700 -3.2 -2.2 peptidylprolyl isomerase compare
ABZR87_RS10170 -3.2 -6.3 RseA family anti-sigma factor compare
ABZR87_RS05015 -3.2 -4.3 penicillin-binding protein 2 compare
ABZR87_RS06495 -3.2 -2.2 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
ABZR87_RS09975 -3.2 -5.2 Fe-S cluster assembly transcriptional regulator IscR compare
ABZR87_RS09440 -3.2 -8.9 DUF2059 domain-containing protein compare
ABZR87_RS16185 -3.1 -3.6 dCTP deaminase compare
ABZR87_RS01285 -3.1 -2.5 preprotein translocase subunit YajC compare
ABZR87_RS07635 -3.1 -4.6 crossover junction endodeoxyribonuclease RuvC compare
ABZR87_RS13185 -3.0 -11.1 efflux RND transporter periplasmic adaptor subunit compare
ABZR87_RS02480 -3.0 -3.6 imidazole glycerol phosphate synthase subunit HisH compare
ABZR87_RS04940 -3.0 -6.4 PAS domain-containing sensor histidine kinase compare
ABZR87_RS14510 -3.0 -7.5 tRNA pseudouridine(38-40) synthase TruA compare
ABZR87_RS13180 -2.9 -15.7 efflux RND transporter permease subunit compare
ABZR87_RS07035 -2.9 -8.2 RNase adapter RapZ compare
ABZR87_RS12785 -2.9 -2.0 endopeptidase La compare
ABZR87_RS10610 -2.8 -2.8 inositol monophosphatase family protein compare
ABZR87_RS16080 -2.8 -4.1 P-II family nitrogen regulator compare
ABZR87_RS09625 -2.8 -12.8 CobD/CbiB family protein compare
ABZR87_RS07625 -2.8 -5.1 Holliday junction branch migration protein RuvA compare
ABZR87_RS08765 -2.8 -14.0 TolC family outer membrane protein compare
ABZR87_RS10175 -2.7 -6.7 MucB/RseB C-terminal domain-containing protein compare
ABZR87_RS00965 -2.7 -11.8 bifunctional anthranilate synthase component I family protein/class IV aminotransferase compare
ABZR87_RS10980 -2.6 -1.2 tRNA-Leu compare
ABZR87_RS08775 -2.6 -8.0 protein-L-isoaspartate O-methyltransferase compare
ABZR87_RS11125 -2.6 -8.1 cell division protein ZapE compare
ABZR87_RS11940 -2.6 -5.7 SsrA-binding protein SmpB compare
ABZR87_RS10910 -2.6 -3.2 RodZ family helix-turn-helix domain-containing protein compare
ABZR87_RS06845 -2.6 -12.8 heme o synthase compare
ABZR87_RS14255 -2.5 -12.3 lipid A hydroxylase LpxO compare
ABZR87_RS21285 -2.5 -3.4 TetR/AcrR family transcriptional regulator compare
ABZR87_RS06745 -2.5 -6.6 S41 family peptidase compare
ABZR87_RS01885 -2.4 -6.9 bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ compare
ABZR87_RS13475 -2.4 -9.7 PAS domain S-box protein compare
ABZR87_RS06265 -2.4 -8.3 biotin synthase BioB compare
ABZR87_RS12795 -2.4 -6.1 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
ABZR87_RS13285 -2.3 -12.1 polyhydroxyalkanoate synthesis repressor PhaR compare
ABZR87_RS06355 -2.3 -8.0 SPOR domain-containing protein compare
ABZR87_RS02575 -2.3 -8.0 transposase compare
ABZR87_RS07050 -2.2 -2.0 PTS IIA-like nitrogen regulatory protein PtsN compare
ABZR87_RS16250 -2.2 -4.9 iron-sulfur cluster carrier protein ApbC compare
ABZR87_RS09460 -2.2 -7.7 prephenate dehydrogenase compare
ABZR87_RS15810 -2.2 -5.5 hypothetical protein compare
ABZR87_RS00215 -2.2 -3.8 sulfite exporter TauE/SafE family protein compare
ABZR87_RS08970 -2.2 -8.6 protein TolQ compare
ABZR87_RS02150 -2.2 -2.2 lysozyme inhibitor LprI family protein compare
ABZR87_RS01035 -2.2 -6.8 histidine utilization repressor compare
ABZR87_RS08980 -2.1 -4.4 cell envelope integrity protein TolA compare
ABZR87_RS20155 -2.1 -6.2 type VI secretion system-associated protein TagF compare
ABZR87_RS09515 -2.1 -1.4 cysteine synthase CysM compare
ABZR87_RS04885 -2.1 -15.6 lytic transglycosylase domain-containing protein compare
ABZR87_RS06705 -2.1 -11.8 glutamate--cysteine ligase compare
ABZR87_RS11615 -2.1 -2.7 LysR family transcriptional regulator compare
ABZR87_RS06610 -2.1 -14.4 D-alanyl-D-alanine carboxypeptidase family protein compare
ABZR87_RS12585 -2.1 -9.9 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein compare
ABZR87_RS00325 -2.1 -3.0 peptidylprolyl isomerase compare
ABZR87_RS06395 -2.0 -4.2 response regulator compare
ABZR87_RS02285 -2.0 -10.9 glucan biosynthesis protein G compare
ABZR87_RS01485 -2.0 -5.9 2-dehydro-3-deoxygalactonokinase compare
ABZR87_RS02165 -2.0 -5.2 CYTH domain-containing protein compare
ABZR87_RS17310 -2.0 -4.5 PadR family transcriptional regulator compare
ABZR87_RS13315 -2.0 -9.3 RluA family pseudouridine synthase compare
ABZR87_RS15405 -2.0 -4.0 YebC/PmpR family DNA-binding transcriptional regulator compare
ABZR87_RS10195 -1.9 -2.2 signal peptidase I compare
ABZR87_RS12790 -1.9 -6.1 ATP-dependent Clp protease ATP-binding subunit ClpX compare
ABZR87_RS08655 -1.9 -5.6 glucose-1-phosphate thymidylyltransferase RfbA compare
ABZR87_RS09635 -1.9 -2.3 ribosome small subunit-dependent GTPase A compare
ABZR87_RS08990 -1.9 -7.2 peptidoglycan-associated lipoprotein Pal compare
ABZR87_RS10165 -1.9 -10.7 RNA polymerase sigma factor RpoE compare
ABZR87_RS08985 -1.9 -11.1 Tol-Pal system beta propeller repeat protein TolB compare
ABZR87_RS10900 -1.9 -6.7 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN compare
ABZR87_RS16960 -1.9 -5.6 HAMP domain-containing sensor histidine kinase compare
ABZR87_RS18910 -1.9 -1.2 DUF2239 family protein compare
ABZR87_RS11760 -1.9 -1.1 membrane protein compare
ABZR87_RS10990 -1.8 -7.7 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB compare


Specific Phenotypes

For 27 genes in this experiment

For carbon source Lauric acid in Ralstonia sp. UNC404CL21Col

For carbon source Lauric acid across organisms