Experiment set9IT088 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Conessine 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_1373 -4.6 -3.2 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_1613 -4.4 -6.5 septum site-determining protein MinC compare
Psyr_0951 -3.7 -3.8 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_4340 -3.6 -12.0 phosphomethylpyrimidine kinase, putative compare
Psyr_0033 -3.4 -2.3 tryptophan synthase, alpha chain compare
Psyr_4740 -3.4 -7.5 thiazole-phosphate synthase compare
Psyr_1544 -3.3 -6.2 SirA-like protein compare
Psyr_0034 -3.3 -3.9 tryptophan synthase, beta chain compare
Psyr_3013 -3.3 -2.8 magnesium chelatase subunit ChlD compare
Psyr_4341 -3.2 -10.3 thiamine-phosphate diphosphorylase compare
Psyr_4464 -3.1 -2.1 lipoprotein, putative compare
Psyr_4203 -2.6 -2.8 SsrA-binding protein compare
Psyr_4362 -2.6 -3.6 Rare lipoprotein A compare
Psyr_4683 -2.5 -5.9 dethiobiotin synthase compare
Psyr_3287 -2.4 -2.9 DNA topoisomerase I compare
Psyr_4687 -2.4 -9.0 biotin synthase compare
Psyr_0487 -2.4 -3.8 glutathione synthase compare
Psyr_4920 -2.3 -1.4 conserved hypothetical bacteriophage protein compare
Psyr_4519 -2.3 -7.2 General substrate transporter:Major facilitator superfamily compare
Psyr_3419 -2.2 -5.5 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_1717 -2.2 -2.4 TPR repeat:von Willebrand factor, type A compare
Psyr_2594 -2.2 -2.0 unknown conserved protein in bacilli compare
Psyr_0454 -2.1 -5.9 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_1378 -2.1 -3.4 RecA protein compare
Psyr_0255 -2.1 -2.7 glutamate-cysteine ligase compare
Psyr_4091 -2.1 -4.0 8-oxo-dGTPase compare
Psyr_3208 -2.0 -2.4 NADH dehydrogenase subunit M compare
Psyr_0383 -2.0 -1.3 Twin-arginine translocation protein TatB compare
Psyr_2980 -1.9 -3.4 UDP-glucose pyrophosphorylase compare
Psyr_2591 -1.9 -5.5 transport system permease protein compare
Psyr_4686 -1.9 -5.8 8-amino-7-oxononanoate synthase compare
Psyr_3906 -1.8 -1.9 regulatory protein, DeoR compare
Psyr_4151 -1.8 -1.8 Phosphocarrier HPr protein compare
Psyr_4822 -1.8 -3.1 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_0791 -1.8 -2.5 MOSC compare
Psyr_1419 -1.7 -4.4 preQ(0) biosynthesis protein QueC compare
Psyr_0917 -1.7 -9.0 ABC-2 compare
Psyr_1408 -1.7 -2.8 Holliday junction endonuclease RuvC compare
Psyr_0835 -1.7 -5.3 transcriptional regulator, TraR/DksA family compare
Psyr_4893 -1.7 -1.4 imidazole glycerol phosphate synthase subunit hisF compare
Psyr_2590 -1.6 -3.1 Periplasmic binding protein compare
Psyr_4684 -1.6 -2.7 biotin synthesis protein BioC compare
Psyr_4991 -1.6 -2.5 hypothetical protein compare
Psyr_4566 -1.6 -7.8 Peptidase M23B compare
Psyr_2854 -1.6 -5.4 conserved hypothetical protein compare
Psyr_5067 -1.6 -5.3 conserved hypothetical protein compare
Psyr_0531 -1.6 -2.0 LmbE-like protein compare
Psyr_4138 -1.6 -3.1 Toluene tolerance compare
Psyr_2767 -1.6 -2.7 Glycoside hydrolase, family 19 compare
Psyr_RNA28 -1.6 -2.1 tRNA-Val compare
Psyr_0529 -1.6 -3.7 Glycosyl transferase, group 1 compare
Psyr_4512 -1.6 -5.0 putative phage-related protein compare
Psyr_4015 -1.6 -2.1 conserved domain protein compare
Psyr_5133 -1.5 -4.6 tRNA modification GTPase trmE compare
Psyr_0831 -1.5 -3.2 Two-component response regulator CbrB compare
Psyr_5135 -1.5 -0.8 Protein of unknown function DUF37 compare
Psyr_0574 -1.4 -4.9 protease FtsH subunit HflK compare
Psyr_0918 -1.4 -9.7 ABC transporter compare
Psyr_2592 -1.4 -4.0 transport system permease protein compare
Psyr_4622 -1.4 -3.3 Nucleotidyl transferase compare
Psyr_4194 -1.4 -4.1 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_1505 -1.4 -3.1 Protein of unknown function DUF156 compare
Psyr_3896 -1.4 -2.5 BFD-like [2Fe-2S]-binding region compare
Psyr_2112 -1.4 -2.5 Protein with unknown function DUF469 compare
Psyr_0849 -1.4 -7.1 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_2150 -1.4 -3.6 protein of unknown function DUF903 compare
Psyr_4627 -1.4 -1.8 dimethyladenosine transferase compare
Psyr_3701 -1.3 -2.1 thioredoxin, putative compare
Psyr_3808 -1.3 -1.0 hypothetical protein compare
Psyr_0571 -1.3 -2.9 tRNA isopentenyltransferase compare
Psyr_3620 -1.3 -1.8 hypothetical protein compare
Psyr_3005 -1.3 -2.5 3-oxoadipate enol-lactonase compare
Psyr_2202 -1.3 -2.1 ABC transporter compare
Psyr_4417 -1.3 -1.8 Ferredoxin--nitrite reductase compare
Psyr_3342 -1.3 -2.0 conserved hypothetical protein compare
Psyr_2840 -1.3 -4.2 hypothetical protein compare
Psyr_1720 -1.3 -3.2 Protein of unknown function DUF58 compare
Psyr_1371 -1.2 -5.4 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_0444 -1.2 -1.3 Malonate decarboxylase delta subunit compare
Psyr_0565 -1.2 -4.1 Protein of unknown function UPF0126 compare
Psyr_0464 -1.2 -1.9 hypothetical protein compare
Psyr_0838 -1.2 -1.8 Rieske [2Fe-2S] region compare
Psyr_3107 -1.2 -2.4 conserved hypothetical protein compare
Psyr_3637 -1.2 -7.5 Glycosyl transferase, family 4 compare
Psyr_2540 -1.2 -1.9 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal compare
Psyr_4335 -1.2 -1.7 transcriptional regulator, AsnC family compare
Psyr_1379 -1.2 -1.5 Regulatory protein RecX compare
Psyr_1765 -1.1 -3.5 GCN5-related N-acetyltransferase compare
Psyr_0014 -1.1 -0.8 lipid A biosynthesis acyltransferase compare
Psyr_3193 -1.1 -2.0 Transcription factor jumonji, jmjC compare
Psyr_0724 -1.1 -1.9 conserved hypothetical protein compare
Psyr_3842 -1.1 -4.9 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit compare
Psyr_2879 -1.1 -1.7 VirK compare
Psyr_3581 -1.1 -3.3 ribosomal large subunit pseudouridine synthase B compare
Psyr_4115 -1.1 -1.6 phosphoheptose isomerase compare
Psyr_0914 -1.1 -5.1 Glycosyl transferase, group 1 compare
Psyr_1953 -1.1 -1.4 conserved hypothetical protein compare
Psyr_3932 -1.1 -1.8 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K compare
Psyr_3008 -1.1 -4.7 Undecaprenyl-diphosphatase compare
Psyr_4139 -1.1 -4.0 Mce4/Rv3499c/MTV023.06c protein compare
Psyr_0916 -1.1 -5.6 GDP-mannose 4,6-dehydratase compare
Psyr_3377 -1.1 -2.2 transcriptional regulator, MarR family compare
Psyr_3179 -1.1 -2.0 DNA translocase FtsK compare
Psyr_2582 -1.1 -5.1 TonB-dependent siderophore receptor compare
Psyr_3791 -1.1 -2.3 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal compare
Psyr_2383 -1.0 -2.3 Protein of unknown function DUF72 compare
Psyr_1138 -1.0 -0.8 GCN5-related N-acetyltransferase compare
Psyr_3673 -1.0 -1.7 Phosphoglycerate/bisphosphoglycerate mutase compare
Psyr_2151 -1.0 -1.6 monosaccharide ABC transporter substrate-binding protein, CUT2 family compare
Psyr_3425 -1.0 -1.7 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp compare
Psyr_2788 -1.0 -2.4 hypothetical protein compare
Psyr_2688 -1.0 -2.7 conserved hypothetical protein compare
Psyr_2538 -1.0 -1.1 Binding-protein-dependent transport systems inner membrane component compare
Psyr_4897 -1.0 -1.7 imidazoleglycerol-phosphate dehydratase compare
Psyr_3476 -1.0 -2.1 Flagellar basal body rod protein:Protein of unknown function DUF1078 compare
Psyr_1614 -1.0 -0.7 lipid A biosynthesis acyltransferase compare
Psyr_4262 -1.0 -1.1 lipoprotein, putative compare
Psyr_2056 -1.0 -2.9 CHAD compare
Psyr_0936 -1.0 -6.0 Glycosyl transferase, group 1 compare
Psyr_2067 -1.0 -1.3 ABC transporter compare
Psyr_3678 -1.0 -2.9 adenosylcobinamide-phosphate synthase compare
Psyr_4361 -1.0 -2.5 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 compare
Psyr_3886 -1.0 -1.3 methionyl-tRNA synthetase compare
Psyr_0830 -1.0 -2.9 Poly(A) polymerase compare
Psyr_1747 -1.0 -2.7 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_1418 -1.0 -1.8 Radical SAM compare
Psyr_1667 -1.0 -3.0 Colicin V production protein compare
Psyr_1236 -1.0 -2.2 transcriptional regulator, BadM/Rrf2 family compare
Psyr_0250 -1.0 -3.4 conserved hypothetical protein compare
Psyr_2137 -1.0 -2.1 molybdopterin molybdochelatase compare
Psyr_3727 -0.9 -2.9 conserved hypothetical protein compare
Psyr_1843 -0.9 -1.6 Protein of unknown function DUF1311 compare
Psyr_1910 -0.9 -2.7 VacJ-like lipoprotein compare
Psyr_1678 -0.9 -0.9 Hypothetical protein compare
Psyr_0070 -0.9 -1.2 hypothetical protein compare
Psyr_0303 -0.9 -2.1 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding protein compare
Psyr_0378 -0.9 -4.5 Glycosyl transferase, family 2 compare
Psyr_1663 -0.9 -2.8 phosphoribosylanthranilate isomerase compare
Psyr_0475 -0.9 -1.8 Protein of unknown function YGGT compare
Psyr_1530 -0.9 -1.8 hypothetical protein compare
Psyr_3199 -0.9 -2.2 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_2593 -0.9 -2.0 ABC transporter compare
Psyr_0219 -0.9 -4.0 phosphomannomutase compare
Psyr_2897 -0.9 -3.3 regulatory protein, LuxR:Response regulator receiver compare
Psyr_3585 -0.9 -2.2 Sua5/YciO/YrdC/YwlC compare
Psyr_3055 -0.9 -0.8 Aminoglycoside phosphotransferase compare
Psyr_4995 -0.9 -2.7 RHS protein compare
Psyr_1095 -0.9 -2.1 Glycine cleavage system T protein compare
Psyr_3282 -0.9 -3.6 transcriptional regulator, TetR family compare
Psyr_0281 -0.9 -1.4 ABC transporter compare
Psyr_4580 -0.9 -1.6 anthranilate phosphoribosyltransferase compare
Psyr_4601 -0.9 -1.6 hypothetical protein compare
Psyr_1277 -0.9 -1.1 formate-dependent phosphoribosylglycinamide formyltransferase compare
Psyr_0393 -0.9 -2.3 Protein of unknown function DUF971 compare
Psyr_2330 -0.9 -2.2 FAD dependent oxidoreductase compare
Psyr_4424 -0.8 -3.7 Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix compare
Psyr_3841 -0.8 -1.4 conserved hypothetical protein compare
Psyr_3427 -0.8 -1.9 conserved hypothetical protein compare
Psyr_3698 -0.8 -2.2 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt compare
Psyr_0826 -0.8 -3.5 glucose-6-phosphate isomerase compare
Psyr_2245 -0.8 -2.1 conserved domain protein compare
Psyr_1268 -0.8 -3.3 extracellular solute-binding protein, family 3:SLT compare
Psyr_0680 -0.8 -1.7 DNA helicase/exodeoxyribonuclease V, gamma subunit compare
Psyr_1864 -0.8 -2.2 spermidine synthase compare
Psyr_4183 -0.8 -1.9 protein translocase subunit secG compare
Psyr_1984 -0.8 -1.7 3-isopropylmalate dehydratase, small subunit compare
Psyr_1410 -0.8 -2.6 Holliday junction DNA helicase RuvB compare
Psyr_0576 -0.8 -1.6 ATP phosphoribosyltransferase regulatory subunit, putative compare
Psyr_4141 -0.8 -2.8 ABC transporter compare
Psyr_4316 -0.8 -2.2 conserved hypothetical protein compare
Psyr_5130 -0.8 -3.5 chromosome segregation ATPase compare
Psyr_4043 -0.8 -1.3 hypothetical protein compare
Psyr_2071 -0.8 -1.8 outer membrane lipoprotein OprI compare
Psyr_2339 -0.8 -1.8 hypothetical protein compare
Psyr_4380 -0.8 -1.5 translation initiation factor 1 (eIF-1/SUI1) compare
Psyr_2269 -0.8 -2.6 GTP cyclohydrolase I compare
Psyr_4730 -0.8 -1.2 FecR protein compare
Psyr_0167 -0.8 -1.6 hypothetical protein compare
Psyr_0535 -0.8 -1.6 toluene tolerance protein, putative compare
Psyr_1588 -0.8 -2.1 Putative exonuclease, RdgC compare
Psyr_4408 -0.8 -3.8 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_4586 -0.8 -1.4 tail protein, putative compare
Psyr_0726 -0.8 -2.9 ribosomal large subunit pseudouridine synthase D compare
Psyr_3676 -0.8 -2.2 adenosylcobyric acid synthase (glutamine-hydrolysing) compare
Psyr_2203 -0.8 -2.4 amino acid/amide ABC transporter membrane protein 2, HAAT family compare
Psyr_0044 -0.8 -1.4 transferase hexapeptide repeat protein compare
Psyr_1329 -0.8 -2.1 conserved hypothetical protein compare
Psyr_4158 -0.8 -4.1 conserved hypothetical protein compare
Psyr_3445 -0.8 -1.5 Flagellar biosynthesis protein, FliO compare
Psyr_3852 -0.8 -2.1 lipoprotein SlyB, putative compare
Psyr_2955 -0.8 -1.7 Surfeit locus 4-related protein compare
Psyr_4860 -0.8 -0.9 Integrase, catalytic region compare
Psyr_2080 -0.8 -2.5 aminodeoxychorismate synthase, subunit I compare
Psyr_4887 -0.8 -4.5 Peptidase S41A, C-terminal protease compare
Psyr_3636 -0.8 -4.4 Polysaccharide biosynthesis protein CapD compare
Psyr_3439 -0.8 -2.1 GTP-binding signal recognition particle SRP54, G-domain protein compare
Psyr_1404 -0.8 -3.2 Ferritin and Dps compare
Psyr_0186 -0.7 -2.7 HAD-superfamily hydrolase, subfamily IA, variant 3:HAD-superfamily hydrolase, subfamily IA, variant 1 compare
Psyr_3354 -0.7 -2.6 Ankyrin compare
Psyr_2822 -0.7 -1.7 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Conessine across organisms