Experiment set9IT088 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Conessine 10 mM

200 most detrimental genes:

  gene name fitness t score description  
Psyr_4480 +1.5 2.7 outer membrane transport energization protein TonB compare
Psyr_2906 +1.5 4.2 Pilus retraction protein PilT compare
Psyr_3684 +1.4 4.3 NLP/P60 compare
Psyr_1832 +1.4 3.1 Exonuclease compare
Psyr_2253 +1.3 3.7 Phosphonate metabolism compare
Psyr_2292 +1.3 1.9 L-glutaminase compare
Psyr_3882 +1.3 1.3 conserved hypothetical protein compare
Psyr_0356 +1.2 2.2 L-cystine ABC transporter ATP-binding protein / Diaminopimelate ABC transporter ATP-binding protein compare
Psyr_1992 +1.2 2.5 Zinc-containing alcohol dehydrogenase superfamily compare
Psyr_1852 +1.1 2.2 conserved hypothetical protein compare
Psyr_0478 +1.1 6.1 pilus retraction ATPase PilT compare
Psyr_3867 +1.1 2.2 hypothetical protein compare
Psyr_5036 +1.0 1.9 Response regulator receiver compare
Psyr_1802 +1.0 1.2 transcriptional regulator, AsnC family compare
Psyr_0857 +0.9 1.6 [SSU ribosomal protein S18P]-alanine acetyltransferase compare
Psyr_4466 +0.9 2.5 Thioredoxin compare
Psyr_1875 +0.9 2.5 Enoyl-CoA hydratase/isomerase compare
Psyr_2251 +0.9 2.1 Phosphonate metabolism PhnG compare
Psyr_1718 +0.9 1.4 von Willebrand factor, type A compare
Psyr_4801 +0.9 3.3 Outer membrane efflux protein compare
Psyr_3116 +0.9 2.4 transcriptional regulator, CdaR family compare
Psyr_1638 +0.9 1.3 RNAse E compare
Psyr_2679 +0.8 1.7 Binding-protein-dependent transport systems inner membrane component compare
Psyr_4254 +0.8 1.5 conserved hypothetical protein compare
Psyr_3703 +0.8 2.1 Flavodoxin/nitric oxide synthase compare
Psyr_1447 +0.8 1.4 conserved hypothetical protein compare
Psyr_3127 +0.8 2.0 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_0295 +0.8 3.4 amino acid ABC transporter ATP-binding protein, PAAT family compare
Psyr_2641 +0.8 2.1 hypothetical protein compare
Psyr_4045 +0.8 4.1 YceI compare
Psyr_0447 +0.8 1.7 malonate decarboxylase subunit, putative compare
Psyr_3660 +0.8 2.1 conserved hypothetical protein compare
Psyr_2570 +0.7 2.2 monosaccharide ABC transporter membrane protein, CUT2 family compare
Psyr_0434 +0.7 1.5 AMP-dependent synthetase and ligase compare
Psyr_4077 +0.7 1.6 Methylated-DNA-[protein]-cysteine S-methyltransferase compare
Psyr_2887 +0.7 1.9 Endoribonuclease L-PSP compare
Psyr_1085 +0.7 2.6 23S rRNA m(6)A-1618 methyltransferase compare
Psyr_2055 +0.7 2.6 Transglutaminase-like protein compare
Psyr_2337 +0.7 1.4 conserved hypothetical protein compare
Psyr_2100 +0.7 3.4 assimilatory nitrate reductase (NADH) beta subunit compare
Psyr_0252 +0.7 3.1 adenylate cyclase compare
Psyr_2502 +0.7 1.8 conserved hypothetical protein compare
Psyr_1567 +0.7 2.5 Uncharacterized conserved protein UCP006173 compare
Psyr_3318 +0.7 2.6 conserved hypothetical protein compare
Psyr_0493 +0.7 1.5 CheW-like protein compare
Psyr_3184 +0.7 1.6 ATP-dependent Clp protease adaptor protein ClpS compare
Psyr_2737 +0.7 2.1 hypothetical protein compare
Psyr_0858 +0.7 1.3 conserved hypothetical protein compare
Psyr_0176 +0.6 1.6 conserved hypothetical protein compare
Psyr_3280 +0.6 1.0 methylthioadenosine phosphorylase compare
Psyr_3590 +0.6 1.5 conserved hypothetical protein compare
Psyr_0200 +0.6 3.8 conserved hypothetical protein compare
Psyr_2563 +0.6 1.9 HAD-superfamily hydrolase, subfamily IIA compare
Psyr_2388 +0.6 2.3 Twin-arginine translocation pathway signal compare
Psyr_2434 +0.6 1.5 Carbohydrate kinase, PfkB compare
Psyr_3490 +0.6 2.7 conserved hypothetical protein compare
Psyr_1226 +0.6 1.5 hypothetical protein compare
Psyr_0426 +0.6 1.0 lipoprotein, putative compare
Psyr_0148 +0.6 1.8 hypothetical protein compare
Psyr_3611 +0.6 1.8 Protein of unknown function DUF815 compare
Psyr_2915 +0.6 1.5 transcriptional regulator, AraC family with amidase-like domain protein compare
Psyr_2890 +0.6 1.5 amino acid ABC transporter ATP-binding protein, PAAT family compare
Psyr_0986 +0.6 1.7 16S rRNA m(2)G 1207 methyltransferase compare
Psyr_1752 +0.6 1.8 transcriptional regulator, HxlR family compare
Psyr_3346 +0.6 1.8 conserved hypothetical protein compare
Psyr_4578 +0.6 3.0 conserved hypothetical protein compare
Psyr_4682 +0.6 1.7 conserved hypothetical protein compare
Psyr_3555 +0.6 0.8 aspartate kinase compare
Psyr_4902 +0.6 1.8 Protein of unknown function DUF495 compare
Psyr_0746 +0.6 1.4 IS66 Orf2 like protein compare
Psyr_4494 +0.6 3.5 ABC-type phosphate/phosphonate transport system periplasmic component-like protein compare
Psyr_2177 +0.6 2.2 probable sulfopyruvate decarboxylase compare
Psyr_2200 +0.6 1.1 UreE urease accessory, N-terminal compare
Psyr_3589 +0.6 0.9 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_3006 +0.6 1.8 Protein of unknown function DUF419 compare
Psyr_0013 +0.6 1.9 DNA-3-methyladenine glycosylase I compare
Psyr_2501 +0.6 0.7 Hemerythrin compare
Psyr_2160 +0.6 0.8 cold-shock DNA-binding protein family compare
Psyr_0435 +0.6 0.7 membrane protein, putative compare
Psyr_3018 +0.6 1.3 membrane protein, putative compare
Psyr_2925 +0.6 1.9 Helix-turn-helix motif protein compare
Psyr_3081 +0.6 1.8 Secretion protein HlyD compare
Psyr_0477 +0.6 3.0 Protein of unknown function UPF0001 compare
Psyr_0884 +0.6 2.3 conserved hypothetical protein compare
Psyr_1937 +0.6 1.9 UspA compare
Psyr_2847 +0.6 1.5 hypothetical protein compare
Psyr_1881 +0.6 1.4 conserved hypothetical protein compare
Psyr_0896 +0.5 1.6 Aldose 1-epimerase compare
Psyr_4391 +0.5 1.5 type II and III secretion system protein compare
Psyr_2116 +0.5 2.2 Deoxyguanosinetriphosphate triphosphohydrolase compare
Psyr_1862 +0.5 2.1 Zinc transporter ZIP compare
Psyr_2888 +0.5 2.5 Amine oxidase compare
Psyr_4160 +0.5 1.6 Maf-like protein compare
Psyr_1471 +0.5 2.4 hypothetical protein compare
Psyr_3296 +0.5 1.0 MOSC:MOSC, N-terminal beta barrel compare
Psyr_3696 +0.5 1.5 23S rRNA m(5)U-1939 methyltransferase compare
Psyr_1222 +0.5 0.7 CDS compare
Psyr_3022 +0.5 1.4 transcriptional regulator, AsnC family compare
Psyr_1844 +0.5 1.8 conserved hypothetical protein compare
Psyr_4487 +0.5 1.5 Carbohydrate kinase, PfkB compare
Psyr_2439 +0.5 2.0 mannitol ABC transporter membrane protein / sorbitol ABC transporter membrane protein compare
Psyr_3723 +0.5 0.8 CDS compare
Psyr_2069 +0.5 1.0 conserved hypothetical protein compare
Psyr_1998 +0.5 1.2 lipoprotein, putative compare
Psyr_3835 +0.5 1.6 hypothetical protein compare
Psyr_0765 +0.5 1.6 conserved hypothetical protein compare
Psyr_3004 +0.5 1.4 transcriptional regulator, LysR family compare
Psyr_3143 +0.5 1.3 general secretion pathway protein M, putative compare
Psyr_2248 +0.5 1.7 Phosphonate-binding periplasmic protein compare
Psyr_3830 +0.5 1.8 3-oxoacyl-[acyl-carrier protein] synthase compare
Psyr_4785 +0.5 3.0 Protein of unknown function DUF1311 compare
Psyr_3790 +0.5 1.9 conserved hypothetical protein compare
Psyr_2247 +0.5 1.3 ABC transporter compare
Psyr_4003 +0.5 1.5 conserved hypothetical protein compare
Psyr_2048 +0.5 1.4 Haloacid dehalogenase-like hydrolase:E1-E2 ATPase-associated region compare
Psyr_1968 +0.5 0.9 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_0927 +0.5 1.4 hypothetical protein compare
Psyr_3632 +0.5 1.3 conserved hypothetical protein compare
Psyr_2375 +0.5 1.4 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_3540 +0.5 1.7 Zinc-containing alcohol dehydrogenase superfamily compare
Psyr_3228 +0.5 1.2 Glycosyl transferase, group 1 compare
Psyr_2707 +0.5 2.4 transcriptional regulator, LysR family compare
Psyr_3106 +0.5 2.3 phosphate ABC transporter substrate-binding protein, PhoT family compare
Psyr_1102 +0.5 1.9 conserved hypothetical protein compare
Psyr_0889 +0.5 1.6 SpoVT/AbrB-like protein compare
Psyr_1127 +0.5 0.8 Heavy metal response regulator compare
Psyr_2110 +0.5 2.9 diguanylate cyclase with PAS/PAC sensor compare
Psyr_3710 +0.5 1.6 conserved hypothetical protein compare
Psyr_1813 +0.5 3.1 molybdenum cofactor sulfurylase compare
Psyr_0137 +0.5 0.7 outer membrane transport energization protein ExbD compare
Psyr_2534 +0.5 1.4 Carboxymethylenebutenolidase compare
Psyr_3121 +0.5 0.9 Protein of unknown function DUF1345 compare
Psyr_0833 +0.5 1.6 conserved hypothetical protein compare
Psyr_2243 +0.5 0.9 Endoribonuclease L-PSP compare
Psyr_2787 +0.5 0.6 hypothetical protein compare
Psyr_4588 +0.5 1.4 Phage GP46 compare
Psyr_2765 +0.5 1.1 conserved domain protein compare
Psyr_1993 +0.5 2.2 transcriptional regulator, AraC family compare
Psyr_4168 +0.5 1.9 K+-dependent Na+/Ca+ exchanger related-protein compare
Psyr_1925 +0.5 2.3 diaminobutyrate aminotransferase apoenzyme compare
Psyr_4161 +0.5 1.1 Rod shape-determining protein MreD compare
Psyr_2140 +0.5 1.1 conserved hypothetical protein compare
Psyr_4167 +0.5 1.4 Rare lipoprotein A compare
Psyr_4714 +0.5 1.8 Sarcosine oxidase, delta subunit, heterotetrameric compare
Psyr_3152 +0.5 0.9 hypothetical protein compare
Psyr_3028 +0.5 1.2 Protein of unknown function DUF28 compare
Psyr_2254 +0.5 2.3 Phosphonate metabolism PhnJ compare
Psyr_1987 +0.5 1.4 2-keto-3-deoxygalactonate kinase compare
Psyr_3748 +0.5 2.5 GCN5-related N-acetyltransferase compare
Psyr_0839 +0.5 1.8 Deoxyribose-phosphate aldolase compare
Psyr_2051 +0.5 1.0 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_2047 +0.4 2.1 K+ transporting ATPase, A subunit compare
Psyr_1811 +0.4 0.9 transcriptional regulator, GntR family compare
Psyr_3110 +0.4 0.9 Nucleoside 2-deoxyribosyltransferase compare
Psyr_0630 +0.4 1.8 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
Psyr_0885 +0.4 1.3 conserved hypothetical protein compare
Psyr_4224 +0.4 0.4 conserved hypothetical protein compare
Psyr_0645 +0.4 1.7 3-ketoacyl-CoA thiolase compare
Psyr_1786 +0.4 1.6 membrane protein, putative compare
Psyr_0907 +0.4 1.0 conserved hypothetical protein compare
Psyr_0425 +0.4 0.7 Beta-ketoacyl synthase:Beta-ketoacyl synthase compare
Psyr_3083 +0.4 0.9 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_2046 +0.4 1.5 conserved hypothetical protein compare
Psyr_4136 +0.4 0.7 BolA-like protein compare
Psyr_4447 +0.4 1.2 hypothetical protein compare
Psyr_2370 +0.4 1.7 gluconolactonase compare
Psyr_2545 +0.4 1.5 Metallophosphoesterase compare
Psyr_1883 +0.4 1.4 Hypothetical protein compare
Psyr_4582 +0.4 0.7 hypothetical protein compare
Psyr_1689 +0.4 1.3 conserved hypothetical protein compare
Psyr_1317 +0.4 0.6 conserved hypothetical protein compare
Psyr_3460 +0.4 1.0 PAS/PAC sensor signal transduction histidine kinase compare
Psyr_1335 +0.4 1.8 Aminotransferase, class V compare
Psyr_1916 +0.4 1.6 Peptidase S24, S26A and S26B compare
Psyr_2402 +0.4 1.4 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_3819 +0.4 1.7 Protein of unknown function DUF1349 compare
Psyr_1694 +0.4 1.0 Rhomboid-like protein compare
Psyr_3424 +0.4 1.8 conserved hypothetical protein compare
Psyr_2923 +0.4 2.1 Carbohydrate kinase, PfkB compare
Psyr_1048 +0.4 1.2 Secretion protein HlyD compare
Psyr_1882 +0.4 1.3 auxin-binding protein, putative compare
Psyr_0623 +0.4 1.0 Peptidase S24, S26A and S26B compare
Psyr_2507 +0.4 1.1 Endoribonuclease L-PSP compare
Psyr_2695 +0.4 0.9 conserved hypothetical protein compare
Psyr_2744 +0.4 1.1 conserved hypothetical protein compare
Psyr_2468 +0.4 1.3 Enoyl-CoA hydratase/isomerase compare
Psyr_2537 +0.4 0.9 conserved hypothetical protein compare
Psyr_3449 +0.4 1.3 Flagellar hook-length control protein compare
Psyr_4450 +0.4 1.9 transcriptional regulator, TetR family compare
Psyr_3604 +0.4 1.3 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region compare
Psyr_3974 +0.4 1.2 ABC transporter compare
Psyr_4268 +0.4 1.7 Amidase compare
Psyr_3466 +0.4 0.7 Flagellin, C-terminal:Flagellin, N-terminal compare
Psyr_0843 +0.4 2.0 TPR repeat protein compare
Psyr_3230 +0.4 2.2 Glycosyl transferase, group 1 compare
Psyr_3935 +0.4 1.2 Short-chain dehydrogenase/reductase SDR compare
Psyr_3566 +0.4 1.1 transcriptional regulator, AraC family compare
Psyr_1554 +0.4 1.2 hypothetical protein compare
Psyr_4895 +0.4 1.1 conserved hypothetical protein compare
Psyr_1830 +0.4 1.1 ABC transporter, transmembrane region:ABC transporter compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Conessine across organisms